MC07g0098 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0098
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NADH-ubiquinone oxidoreductase chain 1
Location	MC07: 1871247 .. 1871363 (+)
RNA-Seq Expression	MC07g0098
Synteny	MC07g0098

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTAGGATCGTTCGGATTGTTACAACCTCTAGCAGATTGTTTGAAATTGATTCTAAAACAACCTTTTTTACCAAGTATTGCGGAT

mRNA sequence

GCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTAGGATCGTTCGGATTGTTACAACCTCTAGCAGATTGTTTGAAATTGATTCTAAAACAACCTTTTTTACCAAGTATTGCGGAT

Coding sequence (CDS)

GCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTAGGATCGTTCGGATTGTTACAACCTCTAGCAGATTGTTTGAAATTGATTCTAAAACAACCTTTTTTACCAAGTATTGCGGAT

Protein sequence

AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD

Homology

[Close]

BLAST of MC07g0098 vs. ExPASy Swiss-Prot
Match: P92558 (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE=1 SV=4)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-11
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 32 AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 70

[Close]

BLAST of MC07g0098 vs. ExPASy Swiss-Prot
Match: P31839 (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-11
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 38 AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 76

[Close]

BLAST of MC07g0098 vs. ExPASy Swiss-Prot
Match: Q01300 (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-11
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 32 AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 70

[Close]

BLAST of MC07g0098 vs. ExPASy Swiss-Prot
Match: Q01148 (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-11
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 32 AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 70

[Close]

BLAST of MC07g0098 vs. ExPASy Swiss-Prot
Match: P26845 (NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 PE=3 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-08
Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          A +QRRKGP+VVG  GLLQPLAD LKL++K+P LPS A+
Sbjct: 35 ASMQRRKGPNVVGILGLLQPLADGLKLMIKEPILPSSAN 73

[Close]

BLAST of MC07g0098 vs. NCBI nr
Match: AFK49321.1 (unknown [Lotus japonicus])

HSP 1 Score: 68.2 bits (165), Expect = 1.71e-13
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. NCBI nr
Match: KAG6621639.1 (hypothetical protein I3842_Q005600, partial [Carya illinoinensis])

HSP 1 Score: 68.2 bits (165), Expect = 1.80e-13
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. NCBI nr
Match: XP_025658107.1 (uncharacterized protein LOC112754623 [Arachis hypogaea])

HSP 1 Score: 68.2 bits (165), Expect = 1.84e-13
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. NCBI nr
Match: XP_025881931.1 (uncharacterized protein LOC107276733 [Oryza sativa Japonica Group])

HSP 1 Score: 68.2 bits (165), Expect = 1.94e-13
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. NCBI nr
Match: XP_042414854.1 (NADH-ubiquinone oxidoreductase chain 1-like [Zingiber officinale])

HSP 1 Score: 68.2 bits (165), Expect = 2.04e-13
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. ExPASy TrEMBL
Match: I3T9X9 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.27e-14
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. ExPASy TrEMBL
Match: A0A6N2L2K9 (Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS169388 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 9.07e-14
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQP+AD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPIADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. ExPASy TrEMBL
Match: A0A6N2K8L5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS49527 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 9.78e-14
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQP+AD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPIADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. ExPASy TrEMBL
Match: A0A6A4MSF1 (NADH-ubiquinone oxidoreductase chain 1 OS=Lupinus albus OX=3870 GN=Lalb_Chr00c21g0405731 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.86e-14
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. ExPASy TrEMBL
Match: A0A6P6FU67 (uncharacterized protein LOC112490030 OS=Ziziphus jujuba OX=326968 GN=LOC112490030 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.86e-14
Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 39
          AFVQRRKGPDVVGSFGLLQPLAD LKLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. TAIR 10
Match: AT2G07785.1 (NADH dehydrogenase family protein )

HSP 1 Score: 66.2 bits (160), Expect = 6.5e-12
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          AFVQRRKGPDVVGSFGLLQPLAD  KLILK+P  PS A+
Sbjct: 2  AFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSAN 40

[Close]

BLAST of MC07g0098 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 66.2 bits (160), Expect = 6.5e-12
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          AFVQRRKGPDVVGSFGLLQPLAD  KLILK+P  PS A+
Sbjct: 32 AFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSAN 70

[Close]

BLAST of MC07g0098 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 66.2 bits (160), Expect = 6.5e-12
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          AFVQRRKGPDVVGSFGLLQPLAD  KLILK+P  PS A+
Sbjct: 32 AFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSAN 70

[Close]

BLAST of MC07g0098 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 66.2 bits (160), Expect = 6.5e-12
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0


Query: 1  AFVQRRKGPDVVGSFGLLQPLADCLKLILKQPFLPSIAD 40
          AFVQRRKGPDVVGSFGLLQPLAD  KLILK+P  PS A+
Sbjct: 32 AFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSAN 70

The following BLAST results are available for this feature:

BLAST of MC07g0098 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92558	1.8e-11	84.62	NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE...	[more]
P31839	1.8e-11	84.62	NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE...	[more]
Q01300	1.8e-11	84.62	NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV...	[more]
Q01148	1.8e-11	84.62	NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 ...	[more]
P26845	2.5e-08	69.23	NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 P...	[more]

BLAST of MC07g0098 vs. NCBI nr


Match Name	E-value	Identity	Description
AFK49321.1	1.71e-13	84.62	unknown [Lotus japonicus]	[more]
KAG6621639.1	1.80e-13	84.62	hypothetical protein I3842_Q005600, partial [Carya illinoinensis]	[more]
XP_025658107.1	1.84e-13	84.62	uncharacterized protein LOC112754623 [Arachis hypogaea]	[more]
XP_025881931.1	1.94e-13	84.62	uncharacterized protein LOC107276733 [Oryza sativa Japonica Group]	[more]
XP_042414854.1	2.04e-13	84.62	NADH-ubiquinone oxidoreductase chain 1-like [Zingiber officinale]	[more]

BLAST of MC07g0098 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
I3T9X9	8.27e-14	84.62	Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1	[more]
A0A6N2L2K9	9.07e-14	82.05	Uncharacterized protein (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS1693...	[more]
A0A6N2K8L5	9.78e-14	82.05	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS49527 PE=3 SV=1	[more]
A0A6A4MSF1	9.86e-14	84.62	NADH-ubiquinone oxidoreductase chain 1 OS=Lupinus albus OX=3870 GN=Lalb_Chr00c21...	[more]
A0A6P6FU67	9.86e-14	84.62	uncharacterized protein LOC112490030 OS=Ziziphus jujuba OX=326968 GN=LOC11249003...	[more]

BLAST of MC07g0098 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07785.1	6.5e-12	82.05	NADH dehydrogenase family protein	[more]
ATMG01120.1	6.5e-12	82.05	NADH dehydrogenase 1B	[more]
ATMG00516.1	6.5e-12	82.05	NADH dehydrogenase 1C	[more]
ATMG01275.1	6.5e-12	82.05	NADH dehydrogenase 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 1..38 e-value: 8.7E-11 score: 41.7
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 1..38
None	No IPR available	PANTHER	PTHR11432:SF20	NADH DEHYDROGENASE 1A	coord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0098.1	MC07g0098.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity