MC07g0045 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0045
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC07: 559314 .. 559469 (-)
RNA-Seq Expression	MC07g0045
Synteny	MC07g0045

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGGGTTCTAAGTGCAGAACTTGAGGGGGAAAACCATGATATATTAATAGTAAAGGGGGTTTTTGAAGTGAAAAAGCTTGAGAGACATATCTGGAGAGGAGCCGATAAAATTGTGACGATTCTCAAGGAAGAAACTGCGGCGGCCGGCGGCGGC

mRNA sequence

AAAGGGGTTCTAAGTGCAGAACTTGAGGGGGAAAACCATGATATATTAATAGTAAAGGGGGTTTTTGAAGTGAAAAAGCTTGAGAGACATATCTGGAGAGGAGCCGATAAAATTGTGACGATTCTCAAGGAAGAAACTGCGGCGGCCGGCGGCGGC

Coding sequence (CDS)

AAAGGGGTTCTAAGTGCAGAACTTGAGGGGGAAAACCATGATATATTAATAGTAAAGGGGGTTTTTGAAGTGAAAAAGCTTGAGAGACATATCTGGAGAGGAGCCGATAAAATTGTGACGATTCTCAAGGAAGAAACTGCGGCGGCCGGCGGCGGC

Protein sequence

KGVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAGGG

Homology

[Close]

BLAST of MC07g0045 vs. NCBI nr
Match: XP_022989967.1 (uncharacterized protein LOC111486994 [Cucurbita maxima])

HSP 1 Score: 67.4 bits (163), Expect = 1.90e-12
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 1  KGVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAGG 51
          KG+ SAE++ EN +++ VKGVFEV+KL  H+ RG DKIVTI+KEE AA GG
Sbjct: 9  KGIESAEVDEENPELITVKGVFEVQKLVAHLRRGVDKIVTIIKEENAAGGG 59

[Close]

BLAST of MC07g0045 vs. NCBI nr
Match: KAG6600923.1 (hypothetical protein SDJN03_06156, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 66.2 bits (160), Expect = 4.59e-12
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 1  KGVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAGG 51
          +GV SAE++ EN +++ VKGVFEV+KL  H+ RG DKIVT++KEE AA GG
Sbjct: 4  EGVESAEVDEENPELITVKGVFEVQKLVAHVRRGVDKIVTVIKEENAAGGG 54

[Close]

BLAST of MC07g0045 vs. NCBI nr
Match: KAA0039827.1 (hypothetical protein E6C27_scaffold122G001020 [Cucumis melo var. makuwa] >TYK24671.1 hypothetical protein E5676_scaffold266G002210 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 5.20e-10
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 2  GVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAG 50
          GV+SAE++ E  +++ VKGVFEVKKL  HI +G +KIVT++KEE A AG
Sbjct: 48 GVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAG 96

[Close]

BLAST of MC07g0045 vs. NCBI nr
Match: KAG6576124.1 (hypothetical protein SDJN03_26763, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.7 bits (143), Expect = 8.35e-10
Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 1  KGVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAGG 51
          KGV S ++E ++ +++ V GVFEV+KL  HI RG DKIVT++K+E AA GG
Sbjct: 29 KGVQSVQVEEDSPELIRVTGVFEVQKLVAHIRRGVDKIVTVIKQENAAGGG 79

[Close]

BLAST of MC07g0045 vs. NCBI nr
Match: KAG7014642.1 (Heavy metal-associated isoprenylated plant protein 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 60.5 bits (145), Expect = 7.00e-09
Identity = 29/51 (56.86%), Postives = 39/51 (76.47%), Query Frame = 0


Query: 1  KGVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAGG 51
          KGV S ++E E+ +++ V GVFEV+KL  HI RG DKIVT++K+E AA GG
Sbjct: 26 KGVQSVQVEEESPELIRVTGVFEVQKLVAHIRRGVDKIVTVVKQENAAGGG 76

[Close]

BLAST of MC07g0045 vs. ExPASy TrEMBL
Match: A0A6J1JHA3 (uncharacterized protein LOC111486994 OS=Cucurbita maxima OX=3661 GN=LOC111486994 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 9.18e-13
Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 1  KGVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAGG 51
          KG+ SAE++ EN +++ VKGVFEV+KL  H+ RG DKIVTI+KEE AA GG
Sbjct: 9  KGIESAEVDEENPELITVKGVFEVQKLVAHLRRGVDKIVTIIKEENAAGGG 59

[Close]

BLAST of MC07g0045 vs. ExPASy TrEMBL
Match: A0A0A0KDJ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094160 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.70e-12
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0


Query: 1  KGVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAGG 51
          KGV+SAE++ E  +++ VKGVFEVKKL  HI RG +KI T++KEE A+AGG
Sbjct: 2  KGVISAEIDKEVPELITVKGVFEVKKLLAHIRRGVEKIATVIKEEPASAGG 52

[Close]

BLAST of MC07g0045 vs. ExPASy TrEMBL
Match: A0A5A7TE72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002210 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.52e-10
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 2  GVLSAELEGENHDILIVKGVFEVKKLERHIWRGADKIVTILKEETAAAG 50
          GV+SAE++ E  +++ VKGVFEVKKL  HI +G +KIVT++KEE A AG
Sbjct: 48 GVISAEIDKEVPELITVKGVFEVKKLLAHIRKGVEKIVTVIKEEPATAG 96

The following BLAST results are available for this feature:

BLAST of MC07g0045 vs.


Match Name	E-value	Identity	Description

BLAST of MC07g0045 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989967.1	1.90e-12	62.75	uncharacterized protein LOC111486994 [Cucurbita maxima]	[more]
KAG6600923.1	4.59e-12	60.78	hypothetical protein SDJN03_06156, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0039827.1	5.20e-10	59.18	hypothetical protein E6C27_scaffold122G001020 [Cucumis melo var. makuwa] >TYK246...	[more]
KAG6576124.1	8.35e-10	54.90	hypothetical protein SDJN03_26763, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014642.1	7.00e-09	56.86	Heavy metal-associated isoprenylated plant protein 8, partial [Cucurbita argyros...	[more]

BLAST of MC07g0045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JHA3	9.18e-13	62.75	uncharacterized protein LOC111486994 OS=Cucurbita maxima OX=3661 GN=LOC111486994...	[more]
A0A0A0KDJ7	2.70e-12	60.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094160 PE=4 SV=1	[more]
A0A5A7TE72	2.52e-10	59.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MC07g0045 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0045.1	MC07g0045.1	mRNA