MC07g0026 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC07g0026
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	LITAF domain-containing protein
Location	MC07: 295869 .. 298976 (+)
RNA-Seq Expression	MC07g0026
Synteny	MC07g0026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGTGCGGTGCGTTTTCACGTGGGGCCAAAGCTAACCCAATGACAGCAAATAATTAATTTCTTCTCTTTTGCTTCGATCGCAATTCTATTTCTCCGTAGCAGTTTCTCGTTTTCGGTTTCTCTCTAGTCATCTTCCACAATTTTCATTGACTTCCATTCCGACGACTTTCAGAATCACCGGCGGAGCAGTCAGAGTTAGGGAAATGTCGAAGAACGACGAGCCGGTCGTCGGAATTCCATTATATGCCGGCGACAACGCGTATCAGGCCGGACAGATCCCTTCCAACGCCATTTATGGCGATCCTCAGGGGGTTCCTATCCAGCAAACCATGTTCCGCGACACTCCTGCTCCTTTCTACTGTCTTTATTGTGGAAATTCCGGACTCACCTCCGTCAGGTGCCTTCTCTTTTCTACCTACCTTTGATCTATTTCTAATTCTCTGATTACCTAATTATTCCCTGTTTTTGTTTCTCGATTGTTAATCTTCACTTGCAAAATAATTGAAATTTGGTAGTTGTAATCCAATTGTGAATTCAGGTCTCGTTTTCGGCACTGAAATTTTCGATTTCGTTTATTGAAACTTGTAATGGCCCTTCCCCATATTTTGTCTTTGACCTAATTTTCTTCTTTCGGATTACAACTACTTGTACTCATAAAACATCGTGGGTCATGAAACTTCATCTTGCTTTCAACATAAGGCAGGAATTGTCTGGTCGTGGGTGGCTAATATGCCCTAAAAATTAATTGAAATTATTTCACTGACTTATACCCTTACGGATGGTTGTTGCTTGGATGTTTTAACTCCTGACTCTGCACTGAAATGAATACTATTTTGTTTGTGTTTGTTTAAATTCCAACTCAACTTTACTGTTGTCCAATAATGTTTACCGAATTGTGGAAATTTTTAGCGATTGCTGTTCGGTTCCTTATACCTTAGTTTGCATAAATCTAACTGGATCCATGGCAGTTACTTTGTTTTCGTATTTGTTCCACTACTCAGTCCAGGTACAAGATGGTAAAAGTTTTAGGACTCCATGGCACTGTTGAATAATTGGTACACCATATAAAGTCTTGTTGGTTGTAAATCCATTTTATGTTAGAAACATTTTTATGGATTACTCTTATATAAGATGCTCCCTCTCTAGAAAAATAGCATTATAGAGTGTGAGGCAGCATTAATTTGCCTTGCAACCCGCGCTTTAGAAATTTTATCATGCAGGGTCTGTCAATCAATCTAATTCGTTGGTATTGTGTTCATGTTTCAGCTTTGTTTATTACTAATTCAACAACAACAATGACTAATGACAATATTAACACAAATCAAGTGGGTTATCCTTATCATTTTGCAATTTTTGTTTTTATTGGAAGCAGCATAGAGAAATATAAGTCCAAATGTTGGGTTTATATACACTCTTTAGAAAAATGTTGTTGCTCATGAGCTTGAGACTTCTTGTAGCACGGCAGCAATATGATTTACACACTTACAAAAGTGTAGTTGCTCATAAGCTCAAGACTTCTTGTAGCAGGGCATCAATATTATTTACGATGGTTGGGCAGCAAAAGTTAGTGTATATTTATTTTGACTAAGAAGATGTAGGAAGGGGAGAGAGGTGGATGTTGTATGATTGGGTTCAGTAGAATAGTTATGCTTCTTCTCCATCTGGTTATGATACTTTTGTGACATACAGATCCAAGATAAGCTCTGCTGCTGTCGTCGGTTGTATGGTACCATTTATGTTGGGAGTATGCTTTCTTTTTCCTTCAATGAACTGCCTTTGGCATAAGTATCACTATTGCCCCAACTGCAAGGAAAAGGTATGGCTTTTTTCCCCCATCATTTTTCATTCTGTCAGTTGCCTCTTCTAATATGCATATTGGGAATTTGACACTTGCTCTAGTATAGATAATTGGAGTAATTAACTATTCTATCCATCTTTTGTTTAGGTTGGTGATTTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTTGCGTTGCCTGCTTGATTTTGATGCATTGTCTGCAGTCAGTCAGTATTTGCTTTGCTTTCGTGCCATTTTTGAGATGTTCTTATTACACTAAGGGATAGGGAAAGATTGGATATCGGTGCATATGTATAATTGTGATAAATACATGCTTCTTATATCATACAGCTTGTACATACCTTGTTCTCACATTGGCATTACTATTTCTATACCATACTGCTAGCCTTTTTCGGTCAAATCATTTCACAGAAAAACAATATACCTTTGTCAAATTACTTTCCTGTGAGCTATCACTATCTGTATCTCCTATCACCATTTGTTTTTACTTCTCAATTTACGTTTTGACCGTGCACCTCACCGTTTGGACGAATCATCGTTGGTTTGCGGTTTGCCCATTTGGTCTCGAGGGGATTTGAATTGCAATCTTTGATGAGACCAGCCAATCACTACGTAAGTAAACAATGAAGAACCATGTGGGAAAACTGAAAAGATAATGTACCTGAGTTCATTTGGGTGTTGCTCAGGAGCAGGTGGAAGAACAAGAATGGAAGTCGATTGCGGAGGTTTGAATCTGGAAGGGAAGGTTCGGCATGAGAAACAAGAGCCGGTCTCGTTAGCCAAAGAGACTGCCTGCAAGTATGCGATGGCAGGGTCCTGGAGTGAAACTTGATGGGGAGTTTGCAGGCAAGTCATCCTTGGCTACAATACAAACATGACTCTCCATTCCCATGCCGGACCTTCCTTCCTTCCTTCCTCATAAATCAGGTAGAATTAAAGCTGCTCTGTTTGTTGAACGCCATGAAAGGGAGATTTTGGTTGTGTGTTGTGTGCATTGGAGTTTGGTTTATATGTTGAAATTAGGAGCTCCACAACAATATACCACTGCTACTCCACACTCATCGAGGTTTCTGTCTCCGAATATATTCTGTATGATTGGATTTGTAAAATGGCTCTTGGCTACTTCTATACATTATGGCCTTTGCCCCAACCCAACACTTATTTTCAGAGAATCTTTCTATGCATTCACCCTAGAGACCACAGTCCATTCCTTGTCCTCATTTTCAGCCTACAAATACAATACATGCACTCACACAAATTAT

mRNA sequence

CGGTGCGGTGCGTTTTCACGTGGGGCCAAAGCTAACCCAATGACAGCAAATAATTAATTTCTTCTCTTTTGCTTCGATCGCAATTCTATTTCTCCGTAGCAGTTTCTCGTTTTCGGTTTCTCTCTAGTCATCTTCCACAATTTTCATTGACTTCCATTCCGACGACTTTCAGAATCACCGGCGGAGCAGTCAGAGTTAGGGAAATGTCGAAGAACGACGAGCCGGTCGTCGGAATTCCATTATATGCCGGCGACAACGCGTATCAGGCCGGACAGATCCCTTCCAACGCCATTTATGGCGATCCTCAGGGGGTTCCTATCCAGCAAACCATGTTCCGCGACACTCCTGCTCCTTTCTACTGTCTTTATTGTGGAAATTCCGGACTCACCTCCGTCAGATCCAAGATAAGCTCTGCTGCTGTCGTCGGTTGTATGGTACCATTTATGTTGGGAGTATGCTTTCTTTTTCCTTCAATGAACTGCCTTTGGCATAAGTATCACTATTGCCCCAACTGCAAGGAAAAGGTTGGTGATTTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTTGCGTTGCCTGCTTGATTTTGATGCATTGTCTGCAGTCAGTCAGTATTTGCTTTGCTTTCGTGCCATTTTTGAGATGTTCTTATTACACTAAGGGATAGGGAAAGATTGGATATCGGTGCATATGTATAATTGTGATAAATACATGCTTCTTATATCATACAGCTTGTACATACCTTGTTCTCACATTGGCATTACTATTTCTATACCATACTGCTAGCCTTTTTCGGTCAAATCATTTCACAGAAAAACAATATACCTTTGTCAAATTACTTTCCTGTGAGCTATCACTATCTGTATCTCCTATCACCATTTGTTTTTACTTCTCAATTTACGTTTTGACCGTGCACCTCACCGTTTGGACGAATCATCGTTGGTTTGCGGTTTGCCCATTTGGTCTCGAGGGGATTTGAATTGCAATCTTTGATGAGACCAGCCAATCACTACGAGCAGGTGGAAGAACAAGAATGGAAGTCGATTGCGGAGGTTTGAATCTGGAAGGGAAGGTTCGGCATGAGAAACAAGAGCCGGTCTCGTTAGCCAAAGAGACTGCCTGCAAGTATGCGATGGCAGGGTCCTGGAGTGAAACTTGATGGGGAGTTTGCAGGCAAGTCATCCTTGGCTACAATACAAACATGACTCTCCATTCCCATGCCGGACCTTCCTTCCTTCCTTCCTCATAAATCAGGTAGAATTAAAGCTGCTCTGTTTGTTGAACGCCATGAAAGGGAGATTTTGGTTGTGTGTTGTGTGCATTGGAGTTTGGTTTATATGTTGAAATTAGGAGCTCCACAACAATATACCACTGCTACTCCACACTCATCGAGGTTTCTGTCTCCGAATATATTCTGTATGATTGGATTTGTAAAATGGCTCTTGGCTACTTCTATACATTATGGCCTTTGCCCCAACCCAACACTTATTTTCAGAGAATCTTTCTATGCATTCACCCTAGAGACCACAGTCCATTCCTTGTCCTCATTTTCAGCCTACAAATACAATACATGCACTCACACAAATTAT

Coding sequence (CDS)

ATGTCGAAGAACGACGAGCCGGTCGTCGGAATTCCATTATATGCCGGCGACAACGCGTATCAGGCCGGACAGATCCCTTCCAACGCCATTTATGGCGATCCTCAGGGGGTTCCTATCCAGCAAACCATGTTCCGCGACACTCCTGCTCCTTTCTACTGTCTTTATTGTGGAAATTCCGGACTCACCTCCGTCAGATCCAAGATAAGCTCTGCTGCTGTCGTCGGTTGTATGGTACCATTTATGTTGGGAGTATGCTTTCTTTTTCCTTCAATGAACTGCCTTTGGCATAAGTATCACTATTGCCCCAACTGCAAGGAAAAGGTTGGTGATTTTGAGAAATTGGATAGGTGTGCTGTGATGGATCCTCCACACTGGACACAGCCAAGCTTTGCGTTGCCTGCTTGA

Protein sequence

MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSGLTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVMDPPHWTQPSFALPA

Homology

[Close]

BLAST of MC07g0026 vs. ExPASy Swiss-Prot
Match: Q94CD4 (GSH-induced LITAF domain protein OS=Arabidopsis thaliana OX=3702 GN=GILP PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.1e-54
Identity = 93/134 (69.40%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           M+K    V+G+P YAG N YQAG +P NAIYGDP G PIQQT++RDTPAPF CLYCGN+G
Sbjct: 1   MAKEGTTVIGVPYYAGQNPYQAGIVPPNAIYGDPLGAPIQQTIYRDTPAPFNCLYCGNTG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT++RSK   AAVV CM+PFMLG CFL PSM+CLW+K H+CP C  KV DFEK D C VM
Sbjct: 61  LTNLRSKPGVAAVVACMMPFMLGFCFLCPSMDCLWNKQHHCPQCGNKVADFEKSDPCLVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPP W QPSFALPA
Sbjct: 121 DPPQWKQPSFALPA 134

[Close]

BLAST of MC07g0026 vs. NCBI nr
Match: XP_022148974.1 (GSH-induced LITAF domain protein [Momordica charantia])

HSP 1 Score: 295 bits (755), Expect = 3.71e-101
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG
Sbjct: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM
Sbjct: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALPA 134
           DPPHWTQPSFALPA
Sbjct: 121 DPPHWTQPSFALPA 134

[Close]

BLAST of MC07g0026 vs. NCBI nr
Match: XP_038906445.1 (GSH-induced LITAF domain protein [Benincasa hispida])

HSP 1 Score: 273 bits (699), Expect = 1.30e-92
Identity = 121/134 (90.30%), Postives = 130/134 (97.01%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKNDEPVVGIPLY G+N YQAGQIPSNAI+GDPQGVPIQQTM+RDTPAPFYC+YCGNSG
Sbjct: 1   MSKNDEPVVGIPLYDGNNPYQAGQIPSNAIFGDPQGVPIQQTMYRDTPAPFYCVYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT VRSKISSAAVVGCM PF+LGVCFLFPSM+CLWHKYHYCP+CKEKVGDFEK+DRCAVM
Sbjct: 61  LTDVRSKISSAAVVGCMTPFLLGVCFLFPSMDCLWHKYHYCPSCKEKVGDFEKMDRCAVM 120

Query: 121 DPPHWTQPSFALPA 134
           DPP+WTQPSFALPA
Sbjct: 121 DPPNWTQPSFALPA 134

[Close]

BLAST of MC07g0026 vs. NCBI nr
Match: XP_004140553.1 (GSH-induced LITAF domain protein [Cucumis sativus] >KGN46422.1 hypothetical protein Csa_005550 [Cucumis sativus])

HSP 1 Score: 263 bits (672), Expect = 1.70e-88
Identity = 115/133 (86.47%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKN EPVVG+PLY G+N YQAGQIP NAI+GDP GVPIQQTM+RDTPAPF C+YCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPHGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT++RSKISSAAVVGCM+PFMLGVCFL PSM+CLWHKYHYCP+CKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 133
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of MC07g0026 vs. NCBI nr
Match: KAA0039847.1 (zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa] >TYK24652.1 zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 263 bits (671), Expect = 2.42e-88
Identity = 115/133 (86.47%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKN EPVVG+PLY G+N YQAGQIP NAI+GDPQGVPIQQTM+RDTPAPF C+YCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT++RSKIS AAVVGCM+PFMLGVCFL PSM+CLWHKYHYCP+CKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 133
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of MC07g0026 vs. NCBI nr
Match: XP_008459901.1 (PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo])

HSP 1 Score: 261 bits (666), Expect = 1.40e-87
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKN EPVVG+PLY G+N YQAGQIP N I+GDPQGVPIQQTM+RDTPAPF C+YCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT++RSKIS AAVVGCM+PFMLGVCFL PSM+CLWHKYHYCP+CKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 133
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of MC07g0026 vs. ExPASy TrEMBL
Match: A0A6J1D5M9 (GSH-induced LITAF domain protein OS=Momordica charantia OX=3673 GN=LOC111017509 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 1.80e-101
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG
Sbjct: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM
Sbjct: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALPA 134
           DPPHWTQPSFALPA
Sbjct: 121 DPPHWTQPSFALPA 134

[Close]

BLAST of MC07g0026 vs. ExPASy TrEMBL
Match: A0A0A0KDG7 (LITAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091950 PE=3 SV=1)

HSP 1 Score: 263 bits (672), Expect = 8.25e-89
Identity = 115/133 (86.47%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKN EPVVG+PLY G+N YQAGQIP NAI+GDP GVPIQQTM+RDTPAPF C+YCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPHGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT++RSKISSAAVVGCM+PFMLGVCFL PSM+CLWHKYHYCP+CKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISSAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 133
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of MC07g0026 vs. ExPASy TrEMBL
Match: A0A5D3DMB0 (Zf-LITAF-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002020 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 1.17e-88
Identity = 115/133 (86.47%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKN EPVVG+PLY G+N YQAGQIP NAI+GDPQGVPIQQTM+RDTPAPF C+YCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNAIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT++RSKIS AAVVGCM+PFMLGVCFL PSM+CLWHKYHYCP+CKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 133
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of MC07g0026 vs. ExPASy TrEMBL
Match: A0A1S3CCH3 (uncharacterized protein LOC103498881 OS=Cucumis melo OX=3656 GN=LOC103498881 PE=3 SV=1)

HSP 1 Score: 261 bits (666), Expect = 6.79e-88
Identity = 114/133 (85.71%), Postives = 125/133 (93.98%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKN EPVVG+PLY G+N YQAGQIP N I+GDPQGVPIQQTM+RDTPAPF C+YCGNSG
Sbjct: 1   MSKNHEPVVGVPLYVGNNPYQAGQIPPNPIFGDPQGVPIQQTMYRDTPAPFNCVYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT++RSKIS AAVVGCM+PFMLGVCFL PSM+CLWHKYHYCP+CKEKVGDFEKLDRCAVM
Sbjct: 61  LTTIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKLDRCAVM 120

Query: 121 DPPHWTQPSFALP 133
           DPPHWTQPS+ALP
Sbjct: 121 DPPHWTQPSYALP 133

[Close]

BLAST of MC07g0026 vs. ExPASy TrEMBL
Match: A0A6J1GS01 (GSH-induced LITAF domain protein OS=Cucurbita moschata OX=3662 GN=LOC111456579 PE=3 SV=1)

HSP 1 Score: 259 bits (661), Expect = 3.93e-87
Identity = 115/134 (85.82%), Postives = 124/134 (92.54%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           MSKNDEPVVGIP Y G+NAYQAGQIP NAI+G PQGVPI QTM+RDTPAP+ C+YCGNSG
Sbjct: 1   MSKNDEPVVGIPFYVGNNAYQAGQIPPNAIFGHPQGVPIHQTMYRDTPAPYCCVYCGNSG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LTS+RSKIS AAVVGCM+PFMLGVCFL PSM+CLWHKYHYCP+CKEKVGDFEK D CAVM
Sbjct: 61  LTSIRSKISLAAVVGCMMPFMLGVCFLCPSMDCLWHKYHYCPSCKEKVGDFEKSDVCAVM 120

Query: 121 DPPHWTQPSFALPA 134
           DPPHWTQPSFALPA
Sbjct: 121 DPPHWTQPSFALPA 134

[Close]

BLAST of MC07g0026 vs. TAIR 10
Match: AT5G13190.1 (CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (InterPro:IPR006629); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-55
Identity = 93/134 (69.40%), Postives = 106/134 (79.10%), Query Frame = 0


Query: 1   MSKNDEPVVGIPLYAGDNAYQAGQIPSNAIYGDPQGVPIQQTMFRDTPAPFYCLYCGNSG 60
           M+K    V+G+P YAG N YQAG +P NAIYGDP G PIQQT++RDTPAPF CLYCGN+G
Sbjct: 1   MAKEGTTVIGVPYYAGQNPYQAGIVPPNAIYGDPLGAPIQQTIYRDTPAPFNCLYCGNTG 60

Query: 61  LTSVRSKISSAAVVGCMVPFMLGVCFLFPSMNCLWHKYHYCPNCKEKVGDFEKLDRCAVM 120
           LT++RSK   AAVV CM+PFMLG CFL PSM+CLW+K H+CP C  KV DFEK D C VM
Sbjct: 61  LTNLRSKPGVAAVVACMMPFMLGFCFLCPSMDCLWNKQHHCPQCGNKVADFEKSDPCLVM 120

Query: 121 DPPHWTQPSFALPA 135
           DPP W QPSFALPA
Sbjct: 121 DPPQWKQPSFALPA 134

The following BLAST results are available for this feature:

BLAST of MC07g0026 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CD4	2.1e-54	69.40	GSH-induced LITAF domain protein OS=Arabidopsis thaliana OX=3702 GN=GILP PE=1 SV...	[more]

BLAST of MC07g0026 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148974.1	3.71e-101	100.00	GSH-induced LITAF domain protein [Momordica charantia]	[more]
XP_038906445.1	1.30e-92	90.30	GSH-induced LITAF domain protein [Benincasa hispida]	[more]
XP_004140553.1	1.70e-88	86.47	GSH-induced LITAF domain protein [Cucumis sativus] >KGN46422.1 hypothetical prot...	[more]
KAA0039847.1	2.42e-88	86.47	zf-LITAF-like domain-containing protein [Cucumis melo var. makuwa] >TYK24652.1 z...	[more]
XP_008459901.1	1.40e-87	85.71	PREDICTED: uncharacterized protein LOC103498881 [Cucumis melo]	[more]

BLAST of MC07g0026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5M9	1.80e-101	100.00	GSH-induced LITAF domain protein OS=Momordica charantia OX=3673 GN=LOC111017509 ...	[more]
A0A0A0KDG7	8.25e-89	86.47	LITAF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091950 PE=3 ...	[more]
A0A5D3DMB0	1.17e-88	86.47	Zf-LITAF-like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CCH3	6.79e-88	85.71	uncharacterized protein LOC103498881 OS=Cucumis melo OX=3656 GN=LOC103498881 PE=...	[more]
A0A6J1GS01	3.93e-87	85.82	GSH-induced LITAF domain protein OS=Cucurbita moschata OX=3662 GN=LOC111456579 P...	[more]

BLAST of MC07g0026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13190.1	1.5e-55	69.40	CONTAINS InterPro DOMAIN/s: LPS-induced tumor necrosis factor alpha factor (Inte...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006629	LPS-induced tumour necrosis factor alpha factor	SMART	SM00714	litaf	coord: 48..113 e-value: 1.5E-13 score: 61.0
IPR006629	LPS-induced tumour necrosis factor alpha factor	PFAM	PF10601	zf-LITAF-like	coord: 46..110 e-value: 1.1E-13 score: 51.3
IPR006629	LPS-induced tumour necrosis factor alpha factor	PROSITE	PS51837	LITAF	coord: 33..113 score: 11.632147
None	No IPR available	PIRSR	PIRSR000071-1	PIRSR000071-1	coord: 99..114 e-value: 3.7 score: 5.4
None	No IPR available	PANTHER	PTHR23292:SF37	BNAC09G43880D PROTEIN	coord: 3..126
IPR037519	LITAF domain containing protein	PANTHER	PTHR23292	LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR	coord: 3..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC07g0026.1	MC07g0026.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding