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MC06g_new0422 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCGGCCTCGGTTCACTGATCATCTCGAGGCGATCAAATTTATCTGCAAGGACTTCTGGTCTGAGCTCTTCAAAAAGCAGATAGACAACTTGAAAACAAACCATAGAGTAAGATCATGAGCCAATCCTAGGAGTAGAAACAGAGCCATATCTTTATCCTACATGAGCCTGGCCCAAATTTAGAGTATCGTTTTGACCATTTGCAGGGTACCTTTGTACTGCAAGATAATCGATTTCGCTGGCTTACACGCATGTCGGTAGATCCTTCTCAAAGTGAATCACAGGATACTTCTGCGGACGGTGAAAGCAAGGCAGCTCAGGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATAAGGGGTGCTCTCTCAAATTTGGGAATTCCTTGTGCAGTTTCTGCTGATATTTCAAATCTTCCTGCTTGTAAGTGA ATGGAGCGGCCTCGGTTCACTGATCATCTCGAGGCGATCAAATTTATCTGCAAGGACTTCTGGTCTGAGCTCTTCAAAAAGCAGATAGACAACTTGAAAACAAACCATAGAGGTACCTTTGTACTGCAAGATAATCGATTTCGCTGGCTTACACGCATGTCGGTAGATCCTTCTCAAAGTGAATCACAGGATACTTCTGCGGACGGTGAAAGCAAGGCAGCTCAGGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATAAGGGGTGCTCTCTCAAATTTGGGAATTCCTTGTGCAGTTTCTGCTGATATTTCAAATCTTCCTGCTTGTAAGTGA ATGGAGCGGCCTCGGTTCACTGATCATCTCGAGGCGATCAAATTTATCTGCAAGGACTTCTGGTCTGAGCTCTTCAAAAAGCAGATAGACAACTTGAAAACAAACCATAGAGGTACCTTTGTACTGCAAGATAATCGATTTCGCTGGCTTACACGCATGTCGGTAGATCCTTCTCAAAGTGAATCACAGGATACTTCTGCGGACGGTGAAAGCAAGGCAGCTCAGGCAACAAGCATGCATCTATATTTCCCATGCGGAATCATAAGGGGTGCTCTCTCAAATTTGGGAATTCCTTGTGCAGTTTCTGCTGATATTTCAAATCTTCCTGCTTGTAAGTGA MERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPSQSESQDTSADGESKAAQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACK Homology
BLAST of MC06g_new0422 vs. ExPASy Swiss-Prot
Match: Q32L78 (Trafficking protein particle complex subunit 6B OS=Bos taurus OX=9913 GN=TRAPPC6B PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25 Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy Swiss-Prot
Match: Q86SZ2 (Trafficking protein particle complex subunit 6B OS=Homo sapiens OX=9606 GN=TRAPPC6B PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25 Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy Swiss-Prot
Match: F1QMV3 (Trafficking protein particle complex subunit 6b OS=Danio rerio OX=7955 GN=trappc6b PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 6.4e-25 Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy Swiss-Prot
Match: Q9D289 (Trafficking protein particle complex subunit 6B OS=Mus musculus OX=10090 GN=Trappc6b PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.4e-24 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy Swiss-Prot
Match: Q78XR0 (Trafficking protein particle complex subunit 6A OS=Mus musculus OX=10090 GN=Trappc6a PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18 Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 0
BLAST of MC06g_new0422 vs. NCBI nr
Match: XP_022154611.1 (trafficking protein particle complex subunit 6B [Momordica charantia]) HSP 1 Score: 232 bits (591), Expect = 5.51e-76 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of MC06g_new0422 vs. NCBI nr
Match: XP_022961590.1 (trafficking protein particle complex subunit 6B [Cucurbita moschata] >XP_022968804.1 trafficking protein particle complex subunit 6B [Cucurbita maxima] >KAG6590416.1 Trafficking protein particle complex subunit 6B, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 225 bits (574), Expect = 2.15e-73 Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of MC06g_new0422 vs. NCBI nr
Match: XP_023545328.1 (trafficking protein particle complex subunit 6B [Cucurbita pepo subsp. pepo]) HSP 1 Score: 224 bits (570), Expect = 8.74e-73 Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 0
BLAST of MC06g_new0422 vs. NCBI nr
Match: XP_038878648.1 (trafficking protein particle complex subunit 6B [Benincasa hispida]) HSP 1 Score: 223 bits (568), Expect = 1.71e-72 Identity = 108/112 (96.43%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of MC06g_new0422 vs. NCBI nr
Match: KAG7023966.1 (Trafficking protein particle complex subunit 6B, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 225 bits (574), Expect = 2.11e-72 Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy TrEMBL
Match: A0A6J1DP88 (trafficking protein particle complex subunit 6B OS=Momordica charantia OX=3673 GN=LOC111021834 PE=3 SV=1) HSP 1 Score: 232 bits (591), Expect = 2.67e-76 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy TrEMBL
Match: A0A6J1I0Q5 (trafficking protein particle complex subunit 6B OS=Cucurbita maxima OX=3661 GN=LOC111467932 PE=3 SV=1) HSP 1 Score: 225 bits (574), Expect = 1.04e-73 Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy TrEMBL
Match: A0A6J1HCN4 (trafficking protein particle complex subunit 6B OS=Cucurbita moschata OX=3662 GN=LOC111462123 PE=3 SV=1) HSP 1 Score: 225 bits (574), Expect = 1.04e-73 Identity = 107/112 (95.54%), Postives = 108/112 (96.43%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy TrEMBL
Match: A0A5D3CG65 (Trafficking protein particle complex subunit 6B isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003390 PE=3 SV=1) HSP 1 Score: 222 bits (565), Expect = 2.37e-72 Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of MC06g_new0422 vs. ExPASy TrEMBL
Match: A0A1S3BP90 (trafficking protein particle complex subunit 6B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492220 PE=3 SV=1) HSP 1 Score: 222 bits (565), Expect = 2.37e-72 Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0
BLAST of MC06g_new0422 vs. TAIR 10
Match: AT3G05000.1 (Transport protein particle (TRAPP) component ) HSP 1 Score: 199.9 bits (507), Expect = 1.1e-51 Identity = 94/112 (83.93%), Postives = 105/112 (93.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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