Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGCAGCTATGATTGAAATAACTATGAGGAAGTCTAGTGGAATGGTTGGGACCTTGATGATGGGAGCCACCCAGTCAATTGAGACTATAGCTTTACACAAAGGAATCCTTCG GTAAGGAGACAAGTAGTCTTTGGCAAAAAAGTCGTTGCTAACAAGCATGGTTAAGAATCTATTTGCTGGTTCAGAGGAAACAACCTCCAGAGTAGTTCTAGAAGCTCCTGGGTTCACAAATTACCAAATAACAGATTTTATTGTTTACTTACTGTATGAAATTGAGGAAGGTATGAGGATTATGTATTGGGAAGACCAATGCATAATAACGAGGTATTATATTGTCACATTGCCCAGATTATATAAACCTTCCCAACAGTCGTAACTAAACTTTAAAGGATTCACAGAACTGGGAGTATGATTGGCGAAATCTCAACTTTAGGAGACATGTTAGATAGAGAAATCAGAGAATGGACCTCTTCACTAAACATTAAGGCTTTTGCTGATGCCAACGTGGGAAATCTAAAAATTTCTCCATAGCTAACATGTTCCATAGATCAATTAGGCAACAATCGGAATCAGAATCCGCAGACAATTCACAGAAACAGAAAGAAAAAGGGGGAAAGTACGGCGGAGGAGTACCGTTCGGAGAGCTGGTGGCCAACCTGATAGCCGATTGCCTCGATGCGACGGGCGGCGAGCTCCGGCTTATTGGCGTAGAAGCGATTGCAATATGTAGAAACCATCTCCGTCAAAAGGCTGTCAACGCAGCTCTCTGA mRNA sequence
ATGTCAGCAGCTATGATTGAAATAACTATGAGGAAGTCTAGTGGAATGGTTGGGACCTTGATGATGGGAGCCACCCAGTCAATTGAGACTATAGCTTTACACAAAGGAATCCTTCGGCAACAATCGGAATCAGAATCCGCAGACAATTCACAGAAACAGAAAGAAAAAGGGGGAAAGTACGGCGGAGGAGTACCGTTCGGAGAGCTGGTGGCCAACCTGATAGCCGATTGCCTCGATGCGACGGGCGGCGAGCTCCGGCTTATTGGCGTAGAAGCGATTGCAATATGTAGAAACCATCTCCGTCAAAAGGCTGTCAACGCAGCTCTCTGA Coding sequence (CDS)
ATGTCAGCAGCTATGATTGAAATAACTATGAGGAAGTCTAGTGGAATGGTTGGGACCTTGATGATGGGAGCCACCCAGTCAATTGAGACTATAGCTTTACACAAAGGAATCCTTCGGCAACAATCGGAATCAGAATCCGCAGACAATTCACAGAAACAGAAAGAAAAAGGGGGAAAGTACGGCGGAGGAGTACCGTTCGGAGAGCTGGTGGCCAACCTGATAGCCGATTGCCTCGATGCGACGGGCGGCGAGCTCCGGCTTATTGGCGTAGAAGCGATTGCAATATGTAGAAACCATCTCCGTCAAAAGGCTGTCAACGCAGCTCTCTGA Protein sequence
MSAAMIEITMRKSSGMVGTLMMGATQSIETIALHKGILRQQSESESADNSQKQKEKGGKYGGGVPFGELVANLIADCLDATGGELRLIGVEAIAICRNHLRQKAVNAAL
Homology
BLAST of MC06g_new0421 vs. NCBI nr
Match:
RWW66971.1 (hypothetical protein BHE74_00025625, partial [Ensete ventricosum] >RZS03931.1 hypothetical protein BHM03_00034189, partial [Ensete ventricosum])
HSP 1 Score: 52.8 bits (125), Expect = 1.10e-06
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0
Query: 48 DNSQKQKEKGGKYGGGVPFGELVANLIADCLDATGGELRLIGVEAIA 94 +N + +EKGGK GGG P ELVA+L+ D LD GGELRL GVE +A Sbjct: 8 ENEMEAEEKGGK-GGGQPLDELVADLVPDRLDPAGGELRLGGVEPLA 53
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
RWW66971.1 1.10e-06 59.57 hypothetical protein BHE74_00025625, partial [Ensete ventricosum] >RZS03931.1 hy... [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
A T G T C A G C A G C T A T G A T T G A A A T A A C T A T G A G G A A G T C T A G T G G A A T G G T T G G G A C C T T G A T G A T G G G A G C C A C C C A G T C A A T T G A G A C T A T A G C T T T A C A C A A A G G A A T C C T T C G G C A A C A A T C G G A A T C A G A A T C C G C A G A C A A T T C A C A G A A A C A G A A A G A A A A A G G G G G A A A G T A C G G C G G A G G A G T A C C G T T C G G A G A G C T G G T G G C C A A C C T G A T A G C C G A T T G C C T C G A T G C G A C G G G C G G C G A G C T C C G G C T T A T T G G C G T A G A A G C G A T T G C A A T A T G T A G A A A C C A T C T C C G T C A A A A G G C T G T C A A C G C A G C T C T C T G A 50 100 150 200 250 300 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 39..61
Relationships
The following mRNA feature(s) are a part of this gene: