MC06g_new0341 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g_new0341
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC06: 15462744 .. 15463028 (-)
RNA-Seq ExpressionMC06g_new0341
SyntenyMC06g_new0341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTCCCTAAAGTCGACCTGCCACAGGCGCATCCGATGGATTCCGCGGATACTTTGCGCTTAAAGGCTTCTATCATTCTAGAGTCGTATTTGGATTTCCTTACTCCTAAGGACCTTGCCCACAAGGCATCCACCATGGTAGTGCTATATAGTACTCACTATGCGACGAGGGAGCAGATGCGTCTCTATATTTGGATTCTGAGTCGGATACTTCCTTCATATGAAGTGGATTCCCCGGTGTTTGCGTATGCATCTGTCGATGCATCTTCGGATTCGGCTTAA

mRNA sequence

ATGCTTCTCCCTAAAGTCGACCTGCCACAGGCGCATCCGATGGATTCCGCGGATACTTTGCGCTTAAAGGCTTCTATCATTCTAGAGTCGTATTTGGATTTCCTTACTCCTAAGGACCTTGCCCACAAGGCATCCACCATGGTAGTGCTATATAGTACTCACTATGCGACGAGGGAGCAGATGCGTCTCTATATTTGGATTCTGAGTCGGATACTTCCTTCATATGAAGTGGATTCCCCGGTGTTTGCGTATGCATCTGTCGATGCATCTTCGGATTCGGCTTAA

Coding sequence (CDS)

ATGCTTCTCCCTAAAGTCGACCTGCCACAGGCGCATCCGATGGATTCCGCGGATACTTTGCGCTTAAAGGCTTCTATCATTCTAGAGTCGTATTTGGATTTCCTTACTCCTAAGGACCTTGCCCACAAGGCATCCACCATGGTAGTGCTATATAGTACTCACTATGCGACGAGGGAGCAGATGCGTCTCTATATTTGGATTCTGAGTCGGATACTTCCTTCATATGAAGTGGATTCCCCGGTGTTTGCGTATGCATCTGTCGATGCATCTTCGGATTCGGCTTAA

Protein sequence

MLLPKVDLPQAHPMDSADTLRLKASIILESYLDFLTPKDLAHKASTMVVLYSTHYATREQMRLYIWILSRILPSYEVDSPVFAYASVDASSDSA
Homology
[Close]
BLAST of MC06g_new0341 vs. NCBI nr
Match: KAF3773510.1 (hypothetical protein EJ110_NYTH47861 [Nymphaea thermarum])

HSP 1 Score: 52.8 bits (125), Expect = 6.66e-06
Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0 

Query: 3  LPKVDLPQAHPMDSADTLRLKASIILES-YLDFLT 36
          L +VDLPQAHPMDSADTLRLKAS+ILES + D LT
Sbjct: 14 LAEVDLPQAHPMDSADTLRLKASLILESAFKDSLT 48

[Close]
BLAST of MC06g_new0341 vs. NCBI nr
Match: KAF3973007.1 (hypothetical protein CMV_003551 [Castanea mollissima])

HSP 1 Score: 52.4 bits (124), Expect = 1.34e-05
Identity = 24/31 (77.42%), Postives = 28/31 (90.32%), Query Frame = 0 

Query: 3   LPKVDLPQAHPMDSADTLRLKASIILESYLD 33
           L KVDLPQ+HPMDSADTLR+KAS+ILE + D
Sbjct: 105 LLKVDLPQSHPMDSADTLRIKASVILEYFFD 135

The following BLAST results are available for this feature:
BLAST of MC06g_new0341 vs.
Match NameE-valueIdentityDescription
BLAST of MC06g_new0341 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF3773510.16.66e-0680.00hypothetical protein EJ110_NYTH47861 [Nymphaea thermarum][more]
KAF3973007.11.34e-0577.42hypothetical protein CMV_003551 [Castanea mollissima][more]
BLAST of MC06g_new0341 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MC06g_new0341 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g_new0341.1MC06g_new0341.1mRNA