![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MC06g2012 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTCACTGTGTGTCATTGAATGCACATAACACATTAACCCAAAGATATGGGCTCGCCCTCTAGCGCTCGATGCTCCATTTGACTCTTTCATATGTTTCTGTTCAAATCCAAAATAATGAAATGAATAAACGGGGACGATTTGGGTGAAGGGACTCTTGAATGAACCGACCACTTTATTATTGGGAACCCATTATTCGATAGTGTCACAAGTCATTGGTTATTATTAATAACGTCCATGGCTTTAGCCCTAGGATATAAAGCTATGCTTAATCATAAGTCCACCAGTCATTATGACTACAATTTGCTCTCTCTCTTTCTCTATCTCGTGAGTCTACACTGTCTATATAAGTATGAGTTTTGGTCCTTCCATATGTTCTACTACAAAGAAAAGCAAGTTAAGAAGCTGCAGGGAATAAGAATGTGTATCAGTGCAACAGAGAGCAGCCCATTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTGAAAAGATCCAAACTTCAAGTTCAGAGGCTCACCAGGTTTTTCTTTCTTACCAAACCCATTTCCCTTTTTTGATGTTATAGAAGGATATGGAAATAATGGGGTTTTTTGGTTTTAGCAGGAGGAGATGCACTGAGGAGAAGGTGGGGAAGGATATTGAGCTGAAGAATCTACAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATTCTTCATCAAGAGAACTTGGCCTTAATGACTGAGTTACAGAAAAAATTCCAACATTTGGATCGC ATTCACTGTGTGTCATTGAATGCACATAACACATTAACCCAAAGATATGGGCTCGCCCTCTAGCGCTCGATGCTCCATTTGACTCTTTCATATGTTTCTGTTCAAATCCAAAATAATGAAATGAATAAACGGGGACGATTTGGGTGAAGGGACTCTTGAATGAACCGACCACTTTATTATTGGGAACCCATTATTCGATAGTGTCACAAGTCATTGGTTATTATTAATAACGTCCATGGCTTTAGCCCTAGGATATAAAGCTATGCTTAATCATAAGTCCACCAGTCATTATGACTACAATTTGCTCTCTCTCTTTCTCTATCTCGTGAGTCTACACTGTCTATATAAGTATGAGTTTTGGTCCTTCCATATGTTCTACTACAAAGAAAAGCAAGTTAAGAAGCTGCAGGGAATAAGAATGTGTATCAGTGCAACAGAGAGCAGCCCATTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTGAAAAGATCCAAACTTCAAGTTCAGAGGCTCACCAGGAGGAGATGCACTGAGGAGAAGGTGGGGAAGGATATTGAGCTGAAGAATCTACAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATTCTTCATCAAGAGAACTTGGCCTTAATGACTGAGTTACAGAAAAAATTCCAACATTTGGATCGC ATGGCTTTAGCCCTAGGATATAAAGCTATGCTTAATCATAAGTCCACCAGTCATTATGACTACAATTTGCTCTCTCTCTTTCTCTATCTCGTGAGTCTACACTGTCTATATAAGTATGAGTTTTGGTCCTTCCATATGTTCTACTACAAAGAAAAGCAAGTTAAGAAGCTGCAGGGAATAAGAATGTGTATCAGTGCAACAGAGAGCAGCCCATTTCATCAAATCCATACTTCCAAGAACAGGAGACGTTTGAAAAGATCCAAACTTCAAGTTCAGAGGCTCACCAGGAGGAGATGCACTGAGGAGAAGGTGGGGAAGGATATTGAGCTGAAGAATCTACAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTGAGAGAGAGAGCCAATATTCTTCATCAAGAGAACTTGGCCTTAATGACTGAGTTACAGAAAAAATTCCAACATTTGGATCGC MALALGYKAMLNHKSTSHYDYNLLSLFLYLVSLHCLYKYEFWSFHMFYYKEKQVKKLQGIRMCISATESSPFHQIHTSKNRRRLKRSKLQVQRLTRRRCTEEKVGKDIELKNLQLYLENQTIIEENEKLRERANILHQENLALMTELQKKFQHLDR Homology
BLAST of MC06g2012 vs. ExPASy Swiss-Prot
Match: F4IG60 (Protein LITTLE ZIPPER 1 OS=Arabidopsis thaliana OX=3702 GN=ZPR1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.4e-06 Identity = 38/90 (42.22%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of MC06g2012 vs. ExPASy Swiss-Prot
Match: Q9LZX5 (Protein LITTLE ZIPPER 2 OS=Arabidopsis thaliana OX=3702 GN=ZPR2 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.4e-06 Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0
BLAST of MC06g2012 vs. NCBI nr
Match: XP_022159679.1 (protein LITTLE ZIPPER 2-like isoform X1 [Momordica charantia]) HSP 1 Score: 211 bits (538), Expect = 7.71e-68 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of MC06g2012 vs. NCBI nr
Match: XP_022159680.1 (protein LITTLE ZIPPER 2-like isoform X2 [Momordica charantia]) HSP 1 Score: 207 bits (526), Expect = 5.37e-66 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of MC06g2012 vs. NCBI nr
Match: XP_023534553.1 (protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 149 bits (377), Expect = 1.10e-43 Identity = 80/95 (84.21%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of MC06g2012 vs. NCBI nr
Match: KAG7036101.1 (Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (365), Expect = 7.58e-42 Identity = 80/96 (83.33%), Postives = 85/96 (88.54%), Query Frame = 0
BLAST of MC06g2012 vs. NCBI nr
Match: XP_022922429.1 (protein LITTLE ZIPPER 1-like [Cucurbita moschata]) HSP 1 Score: 144 bits (362), Expect = 2.04e-41 Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of MC06g2012 vs. ExPASy TrEMBL
Match: A0A6J1E319 (protein LITTLE ZIPPER 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1) HSP 1 Score: 211 bits (538), Expect = 3.74e-68 Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0
BLAST of MC06g2012 vs. ExPASy TrEMBL
Match: A0A6J1DZF5 (protein LITTLE ZIPPER 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026023 PE=4 SV=1) HSP 1 Score: 207 bits (526), Expect = 2.60e-66 Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0
BLAST of MC06g2012 vs. ExPASy TrEMBL
Match: A0A6J1E3C5 (protein LITTLE ZIPPER 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430426 PE=4 SV=1) HSP 1 Score: 144 bits (362), Expect = 9.87e-42 Identity = 78/95 (82.11%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of MC06g2012 vs. ExPASy TrEMBL
Match: A0A0A0KKF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157390 PE=4 SV=1) HSP 1 Score: 138 bits (347), Expect = 1.88e-39 Identity = 75/95 (78.95%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of MC06g2012 vs. ExPASy TrEMBL
Match: A0A5D2LPF0 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G196100v1 PE=4 SV=1) HSP 1 Score: 113 bits (283), Expect = 1.34e-29 Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = 0
BLAST of MC06g2012 vs. TAIR 10
Match: AT3G60890.2 (protein binding ) HSP 1 Score: 55.1 bits (131), Expect = 6.0e-08 Identity = 34/83 (40.96%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of MC06g2012 vs. TAIR 10
Match: AT2G45450.1 (protein binding ) HSP 1 Score: 54.3 bits (129), Expect = 1.0e-07 Identity = 38/90 (42.22%), Postives = 58/90 (64.44%), Query Frame = 0
BLAST of MC06g2012 vs. TAIR 10
Match: AT3G60890.1 (protein binding ) HSP 1 Score: 53.5 bits (127), Expect = 1.7e-07 Identity = 35/83 (42.17%), Postives = 54/83 (65.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|