MC06g1983 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1983
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	CDGSH iron-sulfur domain-containing protein NEET
Location	MC06: 27343378 .. 27344721 (-)
RNA-Seq Expression	MC06g1983
Synteny	MC06g1983

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGAGCCAAGTATTATCGAAATTAAAATTGAAACTTGAGGTTGAAATTTGATAGGAGTCGAAAATGATAAGAGTTAAAAATGGATATGTTCTCCAAAAAGTAATAAAAAAAAAGGTAATATTAATTAGGGCAGGGGATCCACCAATTTGGATTAGGCCGCTTTAAAACCGTGCCCTCCACACGTTCCTCACCCACTCGCACACACAAACACACGCACAGAGAGAGATCTGAAGCACAGGTATGGCGTCGATTATTGTGACCATTGCTGGTTCTGTGGCATCAATATCATCAACACACGCTGCTCACCGGAACTTGTACTCGAGCCGGAGCAGCCGCGGCGGAGGGCGGAGGCGACTGGCCGTCGTCCGAGCAGAAGCCGGCGCTGAACCCATAAACCCGGCCATCAGGAAGAGCGAGGACAAAGTCGTCGACTCTGTTCTTCTTTCTGACCTTGCCAAGCCCCTCACTGCCTATTGCAGGTTCCATTTCCCCATTTACCTTTAATTTCACTTTTAGATTCAAGTAATATTGAGATTTCTATCATTTATTCCCCCCCATTTTAGCAAAATTATAAAGTAATTTAATCTTTTTTATTAAAATATTTTCTAGCTAAATTTGTTTTGCTATCCATATTTTGTTGATTATGTTAGAGATTGAATTTGTAATAATTTTTTGATGTGTAGATGTTGGAGGTCAGCCACTTTTCCTCTGTGTGATGGAAGTCATGTTAAGCACAACAAGGCAACTGGAGATAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAGAAATTATTCTTTTTTTTTTTCTAGCTCTTATCAATTATCATTGCATCAGCTTCAACTCTACATTCTCCTAATGTCTTGATCTATCATTTTTTTTCTTCTCTCAATAGTTTATTTATCTTGTGTTTTGTTCGATATAGTGAATCGGTTTATTGTTTTAAGGTCTTTTTTTCTTATAATAATTTTTAATTCTCTCCCTTGATTTGAGAAAAATTGAAATGTGTGGTGAACTTGTTTTATCCAAATTGTAGTAACCATAAAAAGGTAAATAACAAGGTTTGTACAGTTTTGAAACGTGTGGCGAACTAAATTGATGCTAAGTTTTAGGTAGCTTTCGAGGTGTGAGAATATAGATTAGACATAAACACATAAAACAATAGCCTAAACATAAGATGTCTTACCCGAAAAATAAAGAGTTGGTTAGCGTTCTTTAGGTACTAACTTCTCATAGACATATGTGTGGTAGTTAGCCTAAGCTCGCAGCCAACATTGGTCTGTGATAAGAGGAGAACTTTGGTTGTAGTGAATTTAATTACGTAACAAATTCTTTAATTCATTT

mRNA sequence

CGGGGAGCCAAGTATTATCGAAATTAAAATTGAAACTTGAGGTTGAAATTTGATAGGAGTCGAAAATGATAAGAGTTAAAAATGGATATGTTCTCCAAAAAGTAATAAAAAAAAAGGTAATATTAATTAGGGCAGGGGATCCACCAATTTGGATTAGGCCGCTTTAAAACCGTGCCCTCCACACGTTCCTCACCCACTCGCACACACAAACACACGCACAGAGAGAGATCTGAAGCACAGGTATGGCGTCGATTATTGTGACCATTGCTGGTTCTGTGGCATCAATATCATCAACACACGCTGCTCACCGGAACTTGTACTCGAGCCGGAGCAGCCGCGGCGGAGGGCGGAGGCGACTGGCCGTCGTCCGAGCAGAAGCCGGCGCTGAACCCATAAACCCGGCCATCAGGAAGAGCGAGGACAAAGTCGTCGACTCTGTTCTTCTTTCTGACCTTGCCAAGCCCCTCACTGCCTATTGCAGATGTTGGAGGTCAGCCACTTTTCCTCTGTGTGATGGAAGTCATGTTAAGCACAACAAGGCAACTGGAGATAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAGAAATTATTCTTTTTTTTTTTCTAGCTCTTATCAATTATCATTGCATCAGCTTCAACTCTACATTCTCCTAATGTCTTGATCTATCATTTTTTTTCTTCTCTCAATAGTTTATTTATCTTGTGTTTTGTTCGATATAGTGAATCGGTTTATTGTTTTAAGGTCTTTTTTTCTTATAATAATTTTTAATTCTCTCCCTTGATTTGAGAAAAATTGAAATGTGTGGTGAACTTGTTTTATCCAAATTGTAGTAACCATAAAAAGGTAAATAACAAGGTTTGTACAGTTTTGAAACGTGTGGCGAACTAAATTGATGCTAAGTTTTAGGTAGCTTTCGAGGTGTGAGAATATAGATTAGACATAAACACATAAAACAATAGCCTAAACATAAGATGTCTTACCCGAAAAATAAAGAGTTGGTTAGCGTTCTTTAGGTACTAACTTCTCATAGACATATGTGTGGTAGTTAGCCTAAGCTCGCAGCCAACATTGGTCTGTGATAAGAGGAGAACTTTGGTTGTAGTGAATTTAATTACGTAACAAATTCTTTAATTCATTT

Coding sequence (CDS)

ATGGCGTCGATTATTGTGACCATTGCTGGTTCTGTGGCATCAATATCATCAACACACGCTGCTCACCGGAACTTGTACTCGAGCCGGAGCAGCCGCGGCGGAGGGCGGAGGCGACTGGCCGTCGTCCGAGCAGAAGCCGGCGCTGAACCCATAAACCCGGCCATCAGGAAGAGCGAGGACAAAGTCGTCGACTCTGTTCTTCTTTCTGACCTTGCCAAGCCCCTCACTGCCTATTGCAGATGTTGGAGGTCAGCCACTTTTCCTCTGTGTGATGGAAGTCATGTTAAGCACAACAAGGCAACTGGAGATAATGTTGGTCCTTTGCTCTTAAAGAAGCAGTAG

Protein sequence

MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ

Homology

[Close]

BLAST of MC06g1983 vs. ExPASy Swiss-Prot
Match: Q9FLI7 (CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana OX=3702 GN=NEET PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.3e-28
Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 33  GGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDG 92
           G  ++R+ VVRAE G   INP IRK+EDKVVDSV++++L+K +T YCRCWRS TFPLCDG
Sbjct: 29  GRKQQRMVVVRAEGGG-GINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDG 88

Query: 93  SHVKHNKATGDNVGPLLLKKQ 114
           SHVKHNKA GDNVGPLLLKKQ
Sbjct: 89  SHVKHNKANGDNVGPLLLKKQ 108

[Close]

BLAST of MC06g1983 vs. ExPASy Swiss-Prot
Match: Q7T326 (CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio OX=7955 GN=cisd2 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 51  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 110
           IN  I+K   KVV+ + + DL  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEIDIEDLRTPNVCYCRCWRSKTFPVCDKSHIKHNELTGDNVGPLIL 130

Query: 111 KKQ 114
           KK+
Sbjct: 131 KKK 133

[Close]

BLAST of MC06g1983 vs. ExPASy Swiss-Prot
Match: Q6PCF8 (CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd2-a PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 51  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 110
           IN  I+K   KVV+ + + DL     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 111 KKQ 114
           KK+
Sbjct: 131 KKK 133

[Close]

BLAST of MC06g1983 vs. ExPASy Swiss-Prot
Match: Q6AZG1 (CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis OX=8355 GN=cisd2-b PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 0


Query: 51  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 110
           IN  I+K   KVV+ + + DL     AYCRCWRS TFP+CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLIL 130

Query: 111 KKQ 114
           KK+
Sbjct: 131 KKK 133

[Close]

BLAST of MC06g1983 vs. ExPASy Swiss-Prot
Match: Q05B71 (CDGSH iron-sulfur domain-containing protein 2 OS=Bos taurus OX=9913 GN=CISD2 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 51  INPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLL 110
           IN  I+K   KVV+ + + DL     AYCRCWRS TFP CDGSH KHN+ TGDNVGPL+L
Sbjct: 71  INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLIL 130

Query: 111 KKQ 114
           KK+
Sbjct: 131 KKK 133

[Close]

BLAST of MC06g1983 vs. NCBI nr
Match: XP_022159571.1 (CDGSH iron-sulfur domain-containing protein NEET [Momordica charantia])

HSP 1 Score: 217 bits (552), Expect = 7.23e-71
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSED 60
           MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSED
Sbjct: 1   MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSED 60

Query: 61  KVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 113
           KVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  KVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 113

[Close]

BLAST of MC06g1983 vs. NCBI nr
Match: XP_023534172.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142 bits (359), Expect = 1.40e-41
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 36  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHV 95
           RRR+ VVRAE G E INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHV
Sbjct: 27  RRRMVVVRAEGG-EAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 86

Query: 96  KHNKATGDNVGPLLLKKQ 113
           KHNKATGDNVGPLLLKKQ
Sbjct: 87  KHNKATGDNVGPLLLKKQ 103

[Close]

BLAST of MC06g1983 vs. NCBI nr
Match: XP_022996357.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima])

HSP 1 Score: 142 bits (359), Expect = 1.40e-41
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 36  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHV 95
           RRR+ VVRAE G E INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHV
Sbjct: 27  RRRMVVVRAEGG-EAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 86

Query: 96  KHNKATGDNVGPLLLKKQ 113
           KHNKATGDNVGPLLLKKQ
Sbjct: 87  KHNKATGDNVGPLLLKKQ 103

[Close]

BLAST of MC06g1983 vs. NCBI nr
Match: XP_038876467.1 (CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida])

HSP 1 Score: 139 bits (351), Expect = 2.54e-40
Identity = 66/81 (81.48%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 33  GGGRRRLAVVRAE-AGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCD 92
           G GRR   VVRA+ +G EPINPAIRK+EDKVVDSVL+++L+KPLT YCRCWRSATFPLCD
Sbjct: 26  GSGRRSTVVVRAQGSGGEPINPAIRKTEDKVVDSVLIAELSKPLTPYCRCWRSATFPLCD 85

Query: 93  GSHVKHNKATGDNVGPLLLKK 112
           GSHVKHNKATGDNVGPLLLK+
Sbjct: 86  GSHVKHNKATGDNVGPLLLKQ 106

[Close]

BLAST of MC06g1983 vs. NCBI nr
Match: KAG7035586.1 (CDGSH iron-sulfur domain-containing protein NEET [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139 bits (349), Expect = 4.83e-40
Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 36  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHV 95
           RR + VVRAE G + INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHV
Sbjct: 28  RRMVVVVRAEGG-QAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 87

Query: 96  KHNKATGDNVGPLLLKKQ 113
           KHNKATGDNVGPLLLKKQ
Sbjct: 88  KHNKATGDNVGPLLLKKQ 104

[Close]

BLAST of MC06g1983 vs. ExPASy TrEMBL
Match: A0A6J1E4B9 (CDGSH iron-sulfur domain-containing protein NEET OS=Momordica charantia OX=3673 GN=LOC111025950 PE=4 SV=1)

HSP 1 Score: 217 bits (552), Expect = 3.50e-71
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSED 60
           MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSED
Sbjct: 1   MASIIVTIAGSVASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGAEPINPAIRKSED 60

Query: 61  KVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 113
           KVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ
Sbjct: 61  KVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKKQ 113

[Close]

BLAST of MC06g1983 vs. ExPASy TrEMBL
Match: A0A6J1K1P5 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita maxima OX=3661 GN=LOC111491613 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 6.80e-42
Identity = 69/78 (88.46%), Postives = 73/78 (93.59%), Query Frame = 0


Query: 36  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHV 95
           RRR+ VVRAE G E INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHV
Sbjct: 27  RRRMVVVRAEGG-EAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 86

Query: 96  KHNKATGDNVGPLLLKKQ 113
           KHNKATGDNVGPLLLKKQ
Sbjct: 87  KHNKATGDNVGPLLLKKQ 103

[Close]

BLAST of MC06g1983 vs. ExPASy TrEMBL
Match: A0A6J1H2X5 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita moschata OX=3662 GN=LOC111459616 PE=4 SV=1)

HSP 1 Score: 139 bits (349), Expect = 2.34e-40
Identity = 67/78 (85.90%), Postives = 72/78 (92.31%), Query Frame = 0


Query: 36  RRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDGSHV 95
           RR + VVRAE G + INPAIRKSEDKVVDSV+++DLAKPLT YCRCWRSATFPLCDGSHV
Sbjct: 28  RRMVVVVRAEGG-QAINPAIRKSEDKVVDSVVVADLAKPLTPYCRCWRSATFPLCDGSHV 87

Query: 96  KHNKATGDNVGPLLLKKQ 113
           KHNKATGDNVGPLLLKKQ
Sbjct: 88  KHNKATGDNVGPLLLKKQ 104

[Close]

BLAST of MC06g1983 vs. ExPASy TrEMBL
Match: A0A0A0KL88 (ZnF_CDGSH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G171700 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 7.55e-40
Identity = 67/80 (83.75%), Postives = 71/80 (88.75%), Query Frame = 0


Query: 35  GRRRLAVVRAEAGA--EPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDG 94
           GRRR  VVRAE G+  E INPAIRKSEDKVVDSVL+ +L+KPLT YCRCWRS TFPLCDG
Sbjct: 29  GRRRTVVVRAEGGSSGEHINPAIRKSEDKVVDSVLVPELSKPLTPYCRCWRSGTFPLCDG 88

Query: 95  SHVKHNKATGDNVGPLLLKK 112
           SHVKHNKATGDNVGPLLLKK
Sbjct: 89  SHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of MC06g1983 vs. ExPASy TrEMBL
Match: A0A5A7UKN7 (CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00670 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 2.16e-39
Identity = 71/102 (69.61%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 12  VASISSTHAAHRNLYSSRSSRGGGRRRLAVVRAEAGA-EPINPAIRKSEDKVVDSVLLSD 71
           ++S SS+ +    L   RS    GRRR  VVRAE  + E INPAIRKSE+KVVDSVL+++
Sbjct: 7   ISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAE 66

Query: 72  LAKPLTAYCRCWRSATFPLCDGSHVKHNKATGDNVGPLLLKK 112
           L+KPLT YCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Sbjct: 67  LSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 108

[Close]

BLAST of MC06g1983 vs. TAIR 10
Match: AT5G51720.1 (2 iron, 2 sulfur cluster binding )

HSP 1 Score: 124.8 bits (312), Expect = 4.4e-29
Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 33  GGGRRRLAVVRAEAGAEPINPAIRKSEDKVVDSVLLSDLAKPLTAYCRCWRSATFPLCDG 92
           G  ++R+ VVRAE G   INP IRK+EDKVVDSV++++L+K +T YCRCWRS TFPLCDG
Sbjct: 29  GRKQQRMVVVRAEGGG-GINPEIRKNEDKVVDSVVVTELSKNITPYCRCWRSGTFPLCDG 88

Query: 93  SHVKHNKATGDNVGPLLLKKQ 114
           SHVKHNKA GDNVGPLLLKKQ
Sbjct: 89  SHVKHNKANGDNVGPLLLKKQ 108

The following BLAST results are available for this feature:

BLAST of MC06g1983 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLI7	6.3e-28	72.84	CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana OX=3702...	[more]
Q7T326	1.3e-17	60.32	CDGSH iron-sulfur domain-containing protein 2 OS=Danio rerio OX=7955 GN=cisd2 PE...	[more]
Q6PCF8	2.2e-17	61.90	CDGSH iron-sulfur domain-containing protein 2A OS=Xenopus laevis OX=8355 GN=cisd...	[more]
Q6AZG1	2.2e-17	61.90	CDGSH iron-sulfur domain-containing protein 2B OS=Xenopus laevis OX=8355 GN=cisd...	[more]
Q05B71	2.2e-17	61.90	CDGSH iron-sulfur domain-containing protein 2 OS=Bos taurus OX=9913 GN=CISD2 PE=...	[more]

BLAST of MC06g1983 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159571.1	7.23e-71	100.00	CDGSH iron-sulfur domain-containing protein NEET [Momordica charantia]	[more]
XP_023534172.1	1.40e-41	88.46	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]	[more]
XP_022996357.1	1.40e-41	88.46	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita maxima]	[more]
XP_038876467.1	2.54e-40	81.48	CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida]	[more]
KAG7035586.1	4.83e-40	85.90	CDGSH iron-sulfur domain-containing protein NEET [Cucurbita argyrosperma subsp. ...	[more]

BLAST of MC06g1983 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E4B9	3.50e-71	100.00	CDGSH iron-sulfur domain-containing protein NEET OS=Momordica charantia OX=3673 ...	[more]
A0A6J1K1P5	6.80e-42	88.46	CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1H2X5	2.34e-40	85.90	CDGSH iron-sulfur domain-containing protein NEET OS=Cucurbita moschata OX=3662 G...	[more]
A0A0A0KL88	7.55e-40	83.75	ZnF_CDGSH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G171700 P...	[more]
A0A5A7UKN7	2.16e-39	69.61	CDGSH iron-sulfur domain-containing protein NEET OS=Cucumis melo var. makuwa OX=...	[more]

BLAST of MC06g1983 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51720.1	4.4e-29	72.84	2 iron, 2 sulfur cluster binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018967	Iron-binding zinc finger, CDGSH type	SMART	SM00704	znf_cdgsh	coord: 61..100 e-value: 2.1E-10 score: 50.6
IPR018967	Iron-binding zinc finger, CDGSH type	PFAM	PF09360	zf-CDGSH	coord: 68..94 e-value: 1.1E-9 score: 38.3
IPR042216	MitoNEET, CDGSH iron-sulfur domain	GENE3D	3.40.5.90		coord: 67..113 e-value: 1.5E-23 score: 83.9
IPR045131	CDGSH iron-sulfur domain-containing protein 1/2	PANTHER	PTHR13680	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	coord: 27..113
None	No IPR available	PANTHER	PTHR13680:SF5	CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1	coord: 27..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1983.1	MC06g1983.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0010150	leaf senescence
biological_process	GO:0072593	reactive oxygen species metabolic process
biological_process	GO:0010506	regulation of autophagy
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005741	mitochondrial outer membrane
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding