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MC06g1959 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAAGAGTTGAGTTCAGATCGAGAAGAACAAATTCAAAATTTTGAAAATCAGAGATGGCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCTAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGGTTAGGTCTCTTTAAACTATAATTACCCTTGTTTCTGTAAATAACCCTATGGACTTATGCCTCGTGATTATGGCGTTTCAGCACGTTTCTTAGTCCAGAAGATTCCGGATGTTCTTGCTATTAGGAGGCCATCCGGTGTTAGGGTTTTTTAACTTTTCGACTGAAATTTTTTTATCCGTTTAATTTTGTTCAGACTTATGCTTTGTGAATATGATTGATTAAGCACGTTTCAGTCGGGAAGTTCTTGGGTGTCAAATTCAGTTCAATACTTGAATTAAGGACGTACATTGTTTGGTTTTATTGATCTTTCGACTGTGGAATGCTATCCAATTAATATGTTTAGACTTATGCCTTGTGATTATGAAGGATTATGCACGTTCCACTCAAGAAGTTGTTGGGTATCAATTATGAAATAGTTGAATTAAGTACATCAATAGTTTGGATTTCTTAATCTTTCGACTGTAAAATAACTCCAATTAATATGTTTATGCTTATGCCTTGTGATTATGAAGGATTAAGCACGTTGCACTCGAGAAGATGTTGGGTATCAATTACAATATAGTTCTTCAATAGTTGGATTAAGGGCTTCAAATTTTTAGATTTATTTAACTTTTTACTGTGTACTGATGTGTTTGGATGCTTTATATGGCTATACTATTGGGATGTTTGTAAACACACATACTTTTTGCTTCATCAATTTTTATAACTGCAGTTTGTTTCATTTTGAATTTTGTTTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCGAAGTGCAGTTAGAGTGCTTGTGGGATGGCCGAGTT GGAAGAGTTGAGTTCAGATCGAGAAGAACAAATTCAAAATTTTGAAAATCAGAGATGGCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCTAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGTTTGTTTCATTTTGAATTTTGTTTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCGAAGTGCAGTTAGAGTGCTTGTGGGATGGCCGAGTT ATGGCGACATCGGCGCGAGGAGGGATGAAGGATTTCTACAAGCAAACGAAAAAGGGCGGAATCTCTAAGCCCAAGCCCAAGCCCTCTTCCCGGAAGACCAAATCTCCGGCCAACGCTGCCGCTTCCGCCTCCGACGCCGTTCACCCGCCGGCTCTCGTTTCTTCGTTAGTTTGTTTCATTTTGAATTTTGTTTTAGATGATTACAGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACAGTGCCTATGGTCCTTGCCTTGGAATGACTAGAATGGAACGGTGGGAGCGTGCTCGTAAGTTTGGTTTGAACCCTCCAAAAGACATTGAGACACTCTTAAAGGCTGGCGAAGTGCAGTTAGAGTGCTTGTGGGATGGCCGAGTT MATSARGGMKDFYKQTKKGGISKPKPKPSSRKTKSPANAAASASDAVHPPALVSSLVCFILNFVLDDYSESENMLRQFDMNSAYGPCLGMTRMERWERARKFGLNPPKDIETLLKAGEVQLECLWDGRV Homology
BLAST of MC06g1959 vs. ExPASy Swiss-Prot
Match: Q3T0X9 (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.3e-09 Identity = 26/59 (44.07%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of MC06g1959 vs. ExPASy Swiss-Prot
Match: Q9HCU8 (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.4e-09 Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 0
BLAST of MC06g1959 vs. ExPASy Swiss-Prot
Match: O59835 (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.2e-08 Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of MC06g1959 vs. ExPASy Swiss-Prot
Match: Q9CWP8 (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.8e-08 Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0
BLAST of MC06g1959 vs. NCBI nr
Match: XP_022156193.1 (DNA polymerase delta subunit 4 [Momordica charantia]) HSP 1 Score: 233 bits (593), Expect = 9.77e-77 Identity = 120/129 (93.02%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of MC06g1959 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo] >KAA0055161.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa] >TYK00302.1 DNA polymerase delta subunit 4 [Cucumis melo var. makuwa]) HSP 1 Score: 168 bits (425), Expect = 4.64e-51 Identity = 92/127 (72.44%), Postives = 98/127 (77.17%), Query Frame = 0
BLAST of MC06g1959 vs. NCBI nr
Match: XP_004143634.1 (uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_000175 [Cucumis sativus]) HSP 1 Score: 166 bits (419), Expect = 3.80e-50 Identity = 91/127 (71.65%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of MC06g1959 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata]) HSP 1 Score: 163 bits (413), Expect = 2.92e-49 Identity = 88/126 (69.84%), Postives = 96/126 (76.19%), Query Frame = 0
BLAST of MC06g1959 vs. NCBI nr
Match: KAG6605696.1 (DNA polymerase delta subunit 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035605.1 DNA polymerase delta subunit 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 163 bits (413), Expect = 2.92e-49 Identity = 88/126 (69.84%), Postives = 97/126 (76.98%), Query Frame = 0
BLAST of MC06g1959 vs. ExPASy TrEMBL
Match: A0A6J1DPY8 (DNA polymerase delta subunit 4 OS=Momordica charantia OX=3673 GN=LOC111023139 PE=4 SV=1) HSP 1 Score: 233 bits (593), Expect = 4.73e-77 Identity = 120/129 (93.02%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of MC06g1959 vs. ExPASy TrEMBL
Match: A0A5A7UNL0 (DNA polymerase delta subunit 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00460 PE=4 SV=1) HSP 1 Score: 168 bits (425), Expect = 2.25e-51 Identity = 92/127 (72.44%), Postives = 98/127 (77.17%), Query Frame = 0
BLAST of MC06g1959 vs. ExPASy TrEMBL
Match: A0A1S3CT23 (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1) HSP 1 Score: 168 bits (425), Expect = 2.25e-51 Identity = 92/127 (72.44%), Postives = 98/127 (77.17%), Query Frame = 0
BLAST of MC06g1959 vs. ExPASy TrEMBL
Match: A0A0A0KND6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1) HSP 1 Score: 166 bits (419), Expect = 1.84e-50 Identity = 91/127 (71.65%), Postives = 97/127 (76.38%), Query Frame = 0
BLAST of MC06g1959 vs. ExPASy TrEMBL
Match: A0A6J1H180 (uncharacterized protein LOC111459143 OS=Cucurbita moschata OX=3662 GN=LOC111459143 PE=4 SV=1) HSP 1 Score: 163 bits (413), Expect = 1.42e-49 Identity = 88/126 (69.84%), Postives = 96/126 (76.19%), Query Frame = 0
BLAST of MC06g1959 vs. TAIR 10
Match: AT1G09815.1 (polymerase delta 4 ) HSP 1 Score: 134.0 bits (336), Expect = 8.4e-32 Identity = 77/132 (58.33%), Postives = 92/132 (69.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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