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MC06g1861 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.CTTGACCTTGCCGTAGAGTTTCCTCCTTCAGCTCGTGCAGGAAATTTAATGCGTTTTAATTTTTCTGTAAAAAGAAAAAGAAAAAAAATCCAACAAATAAACCCTAAACCAAACAAAATTTAATGTGAATCATATATGCACCGAATAGATTCATCATGATATTCATAAGATTACAAAATAATAAATAAATAAATAAATAAATAACAAATTACAATCAATAAATAGTAATCCAACCAAATAAACCTAAACCAAACACATTTTATCTGAGATATGCAATTTATCTTCGCCGAATTTTCAGCCCTCCGGCGGCTGTAAAAAGAAAGTTCAGTTCAGTTCAGTTCAGGCGACCGGTCGGCAGCTCTTCCCTCCGGCGCCGGCAGCCGAAAACCTAGAGGTGAGAAAATTAATTTTCCATCCATCCATCCAATTCCAAACAGGATAATGGGAACTGTTCTTATTAAATTTAAATTTATTGTTTCTGTTTTTACTTTTCAATTCTTATACTGAGTGGAAAGTCATACTCGCGCACGAAACATTCTCTCTCTACAGAGAGAAGAGAGAGAAGCCTGCTCCGCCTTCTCTGCTTCCCTGCATATGGCCCAAAGGGGAAGAACAGCGTTCTGAAACGGAGTCCAAATCCTCTCCGCTTTTCCATTGGAATTGAATTCGCAATTCGCTTTTTCCACTTCCAACGAATCGATTGAGTTCTCGGCGTGAAACGGGTAAGATTCTGCTTCCTAGACATTTCATCGCTTTTGCTTCGAACTGATTCCGATGACCGCTGATTGATTGGAAGCTCCTGTTTCTGTTATGCTTATGGATATGTGCGCGAGTTTATGGCTGTTTTTTTTTAATTTTTTTTATTCGTTCTGTGGAGCTCTGTTCGATTTTGGATTCTCCTCTGTAGGTTTATTTTGATGCTGGTTGTTTTGTTTGATTGACTTGCTCGCAATCGCTTGGAGTTTGTTCATCGGGCTTTGCTTCATAATCCGAATTTTTCGTTTTCTTCTTACTTTGCTGTTATCGACTTTATCACTTTTAGTTATTGTTTGCATTGACTGTGGTCTAGTTTGCTTCATTAGCTTCATTTTTGTTTTGGAATGATAAGTGAGGATGTCATTTTATGGTGAGTGAGGGGGATTTATAATGGATGATTGAAGACGAATCTGTCTATTATGGTTCTTTAGGAGTACTTCGTCCCTCTTTTAGTTGCCTTTGTTCCCCTAATTACAGTCACTTATTTCAAATGATCAAGCCTTACAAAATTGTAATACTGTTATTTAGCTTAGCTCATGGAAGCTGGAGATGTTATCAGTAAGTGGCTCTGCTATACAAGTTCTTGCTTATGAGAACCTTTTTTGCCCTTTCCTTCAATTGTGGTCTGGCAGCATTTCTGTTCCCCTTCCCGCACGAAAAGCAAAAAAAATTAATAAGAAGGAAAAATAGCATTTATGTTTGCTCTTTGTGAGATGCAACTCTAATCTTGATTATACCTTTAGGCCACTGTCTACTCTCTACGATTACTTCATAATATTTGCTACTAGCTTTGTTTATCTATGATTCTCTCGGCATATTATGTTATTATCTGTTATTTCATATAAACTAGTGGTCTGCACCTGTCATATCTCATAAGGAATTTTTTAGTTTACATAAACTAGTTAAATTGATTTTTATTATGTTTTCTGTAACAGGGCTAACATTCTATAAAATTTTGAAAGAGGGACATATTGCTACTGGTGCCGATGGTTTTTTGGTGTGTCTTGTAGAAAAGTATACTGAAATGGGAGGTTGCTGCTGTTGTTCTTCAAAAGGAACAGAATCAAATATTGCACCATCCTACTATTATGTCAGTATTGAATTTACCATTGGATGTTTATTTTCATATTTTTATCAATCAAATTCATTATTGTAAGCAAACACTGCAGCCATTATCTAGTATTCATTCATTTCTTAATTATCATTGCCAACAGGCCTAGTTGCATATAATTGTAGGTATTCTGTTATAGCCTGTGAGATAGTGAAGGTCATTTACATCATTTGAAACCCAAAACAGAGAGTGATTTTTATAATGAACTATATTTTCTATAAGTATTTTTATGCATTATGTTGCATAATTCATCATCCATGTATTTTCCCGAGAAGTCTTCTGCCTTCGCACGAATTAACTTAGATTGGTGGTGATCATAGGAGACGCTTGTGTGCCATACTTAATAAATCATGTAAGTTGCAGATTTAACATTTTAAGTGAATATAATAAACATTACATACACTCAAAAACTATCAGTCTATCACTTCTGTTATTTGATCTTGGAACTAGTTGAACTATATGCTGAACTGTTAGCACGATAGTGAAAAGAGTTTTCTTGCCATTGTAAACTGCCTTGCTCAATTTACTTGAATTCAAGTTTTGATGCAGTACCCAAGAGCATCAGATGAGCATGTTCCCCTGTCATCTCCAATTGGTGCTCCCTCAGCATTTTCTAGCGGGCTTTTGGTCGATACAAATCTAGATACATCAATACCTGACACTTATAGATCACCTCCCTTGCCTATGCCATATGATGTTGTTTTAACACATCCACATACTCCACCTGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCCCAGACAACAAATTCTGATGCAGTTCAAGAAATCGCATGCACTAATGCTCGAGAAACTTCAGCCAAGTGTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGACTTTGAAACAGACACATTAAAGGAATCTGAAATCGAACTTTCGAAGGGTGTAGAATCTGTGGCCTTAGCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGGTGAAGTTTTGCCAAAACTTCGTTCAGCTGCCTAGTACCAACCCCACCAAACTATGGAAACATCTTTAACCTCTTATTTTCCAATGTTTGACCTTTTAGTTGCTTGAACTAACAAGTCACCACATTATCGCTTTCTCGATAGGCTGCAGTAGCTTTCCCTTTCGATTCATCCTTTTCTATTATTTTATGCAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCCGTGTGCGATCAGGTGTGTGCCTCACTTTACATTTAACGTTTATTTCTACTCATTAGCTCGTAAAACCATAAAGAAAACTTTCTTATCTCTTCATCATCCCCCCCTGAAATGCAGGAAATGCTCTTTAGCCCTCCAATTGATTAGTGGCGACAAGAAAGTCAGCCGAACGTTTTCTCACATTGAAGTAAAGTTGAAAGTATAGGTTATAAAGTTCCAGCTGCCAGCTCCAGGTTCTTTTTTATAGTTGTTTTCTCTTTTCTACTTTTTCCTTAATGAGTTGTCCATTCCTGTTGCACTTTTCTGTGTGAATTTGTTTTCTGAACATAGAATGGGGGAAAATTTGGGATTATAATTCTTTTCTTTCTTTTTTTTTTTTTTCATTTTGTTGTTTCGTTTCATTTTGTTTTTGTTTTTTTTGTTTTTTTTGGGTGGGAGGGCGGGAAGATGTAAATACAGTTATGCAATATAGTATGTCTGAGCTTGGTTTTTCATTTTACTTCCATTTATCTGAGGTTGTGATTTGTCATAAATGGAATTAAAATGAAGAAAAACAACAGATCTGGGTCGTTGACTTGAATTAAAATGAAAGTGTTTATTCCGTCCTTAAGCTTTGAAAAAGTAATCAATTATGTTCTTGAACTTTGATTAACTAAATGATTATAACAGATGATGAGTTATGCTTACTCTTATTATTGAGTTTCTGATCAATTTAGCATAAACAGTTGAACAAATAGCAC CTTGACCTTGCCGTAGAGTTTCCTCCTTCAGCTCGTGCAGGAAATTTAATGCGTTTTAATTTTTCTGTAAAAAGAAAAAGAAAAAAAATCCAACAAATAAACCCTAAACCAAACAAAATTTAATGTGAATCATATATGCACCGAATAGATTCATCATGATATTCATAAGATTACAAAATAATAAATAAATAAATAAATAAATAACAAATTACAATCAATAAATAGTAATCCAACCAAATAAACCTAAACCAAACACATTTTATCTGAGATATGCAATTTATCTTCGCCGAATTTTCAGCCCTCCGGCGGCTGTAAAAAGAAAGTTCAGTTCAGTTCAGTTCAGGCGACCGGTCGGCAGCTCTTCCCTCCGGCGCCGGCAGCCGAAAACCTAGAGAGAGAAGAGAGAGAAGCCTGCTCCGCCTTCTCTGCTTCCCTGCATATGGCCCAAAGGGGAAGAACAGCGTTCTGAAACGGAGTCCAAATCCTCTCCGCTTTTCCATTGGAATTGAATTCGCAATTCGCTTTTTCCACTTCCAACGAATCGATTGAGTTCTCGGCGTGAAACGGGGCTAACATTCTATAAAATTTTGAAAGAGGGACATATTGCTACTGGTGCCGATGGTTTTTTGGTGTGTCTTGTAGAAAAGTATACTGAAATGGGAGGTTGCTGCTGTTGTTCTTCAAAAGGAACAGAATCAAATATTGCACCATCCTACTATTATTACCCAAGAGCATCAGATGAGCATGTTCCCCTGTCATCTCCAATTGGTGCTCCCTCAGCATTTTCTAGCGGGCTTTTGGTCGATACAAATCTAGATACATCAATACCTGACACTTATAGATCACCTCCCTTGCCTATGCCATATGATGTTGTTTTAACACATCCACATACTCCACCTGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCCCAGACAACAAATTCTGATGCAGTTCAAGAAATCGCATGCACTAATGCTCGAGAAACTTCAGCCAAGTGTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGACTTTGAAACAGACACATTAAAGGAATCTGAAATCGAACTTTCGAAGGGTGTAGAATCTGTGGCCTTAGCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCCGTGTGCGATCAGGAAATGCTCTTTAGCCCTCCAATTGATTAGTGGCGACAAGAAAGTCAGCCGAACGTTTTCTCACATTGAAGTAAAGTTGAAAGTATAGGTTATAAAGTTCCAGCTGCCAGCTCCAGGTTCTTTTTTATAGTTGTTTTCTCTTTTCTACTTTTTCCTTAATGAGTTGTCCATTCCTGTTGCACTTTTCTGTGTGAATTTGTTTTCTGAACATAGAATGGGGGAAAATTTGGGATTATAATTCTTTTCTTTCTTTTTTTTTTTTTTCATTTTGTTGTTTCGTTTCATTTTGTTTTTGTTTTTTTTGTTTTTTTTGGGTGGGAGGGCGGGAAGATGTAAATACAGTTATGCAATATAGTATGTCTGAGCTTGGTTTTTCATTTTACTTCCATTTATCTGAGGTTGTGATTTGTCATAAATGGAATTAAAATGAAGAAAAACAACAGATCTGGGTCGTTGACTTGAATTAAAATGAAAGTGTTTATTCCGTCCTTAAGCTTTGAAAAAGTAATCAATTATGTTCTTGAACTTTGATTAACTAAATGATTATAACAGATGATGAGTTATGCTTACTCTTATTATTGAGTTTCTGATCAATTTAGCATAAACAGTTGAACAAATAGCAC ATGGGAGGTTGCTGCTGTTGTTCTTCAAAAGGAACAGAATCAAATATTGCACCATCCTACTATTATTACCCAAGAGCATCAGATGAGCATGTTCCCCTGTCATCTCCAATTGGTGCTCCCTCAGCATTTTCTAGCGGGCTTTTGGTCGATACAAATCTAGATACATCAATACCTGACACTTATAGATCACCTCCCTTGCCTATGCCATATGATGTTGTTTTAACACATCCACATACTCCACCTGTGGCTCAAGAAATTGGCAGCAATAAGAATGATGCTGCAGCCCAGACAACAAATTCTGATGCAGTTCAAGAAATCGCATGCACTAATGCTCGAGAAACTTCAGCCAAGTGTGAAGGCATCGATGAATCAGACTGCAAGAAGCATACAGACTTTGAAACAGACACATTAAAGGAATCTGAAATCGAACTTTCGAAGGGTGTAGAATCTGTGGCCTTAGCAATTGAAGAGGAGGATGTTTGTCCCATCTGTTTGGAAGAATATGATGGGGAGAATCCAAAACTTACCACAAAATGCGAGCATCATTTTCATCTTGCATGCATTCTGGAATGGATGGAAAGAAGTGATATCTGTCCCGTGTGCGATCAGGAAATGCTCTTTAGCCCTCCAATTGATTAG MGGCCCCSSKGTESNIAPSYYYYPRASDEHVPLSSPIGAPSAFSSGLLVDTNLDTSIPDTYRSPPLPMPYDVVLTHPHTPPVAQEIGSNKNDAAAQTTNSDAVQEIACTNARETSAKCEGIDESDCKKHTDFETDTLKESEIELSKGVESVALAIEEEDVCPICLEEYDGENPKLTTKCEHHFHLACILEWMERSDICPVCDQEMLFSPPID Homology
BLAST of MC06g1861 vs. ExPASy Swiss-Prot
Match: Q2HIJ8 (Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana OX=3702 GN=RHB1A PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.6e-40 Identity = 92/207 (44.44%), Postives = 128/207 (61.84%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy Swiss-Prot
Match: Q8LE94 (E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.3e-20 Identity = 60/180 (33.33%), Postives = 96/180 (53.33%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy Swiss-Prot
Match: Q93ZF6 (E3 ubiquitin-protein ligase AIRP1 OS=Arabidopsis thaliana OX=3702 GN=AIRP1 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18 Identity = 71/208 (34.13%), Postives = 90/208 (43.27%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy Swiss-Prot
Match: Q4TU14 (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana OX=3702 GN=RHF1A PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-09 Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy Swiss-Prot
Match: Q9ZT42 (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana OX=3702 GN=RHF2A PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.5e-09 Identity = 29/73 (39.73%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of MC06g1861 vs. NCBI nr
Match: XP_022156147.1 (probable E3 ubiquitin-protein ligase RHB1A isoform X1 [Momordica charantia]) HSP 1 Score: 439 bits (1130), Expect = 9.06e-156 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of MC06g1861 vs. NCBI nr
Match: XP_038876112.1 (probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876113.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida] >XP_038876115.1 probable E3 ubiquitin-protein ligase RHB1A [Benincasa hispida]) HSP 1 Score: 398 bits (1022), Expect = 2.66e-139 Identity = 190/212 (89.62%), Postives = 196/212 (92.45%), Query Frame = 0
BLAST of MC06g1861 vs. NCBI nr
Match: XP_022970099.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita maxima]) HSP 1 Score: 395 bits (1016), Expect = 2.27e-138 Identity = 190/213 (89.20%), Postives = 197/213 (92.49%), Query Frame = 0
BLAST of MC06g1861 vs. NCBI nr
Match: KAG6579518.1 (putative E3 ubiquitin-protein ligase RHB1A, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 394 bits (1013), Expect = 6.73e-138 Identity = 192/214 (89.72%), Postives = 197/214 (92.06%), Query Frame = 0
BLAST of MC06g1861 vs. NCBI nr
Match: XP_023551494.1 (probable E3 ubiquitin-protein ligase RHB1A [Cucurbita pepo subsp. pepo]) HSP 1 Score: 394 bits (1013), Expect = 6.73e-138 Identity = 192/214 (89.72%), Postives = 197/214 (92.06%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy TrEMBL
Match: A0A6J1DR88 (probable E3 ubiquitin-protein ligase RHB1A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023100 PE=4 SV=1) HSP 1 Score: 439 bits (1130), Expect = 4.39e-156 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy TrEMBL
Match: A0A6J1I4I7 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita maxima OX=3661 GN=LOC111469091 PE=4 SV=1) HSP 1 Score: 395 bits (1016), Expect = 1.10e-138 Identity = 190/213 (89.20%), Postives = 197/213 (92.49%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy TrEMBL
Match: A0A6J1ER94 (probable E3 ubiquitin-protein ligase RHB1A OS=Cucurbita moschata OX=3662 GN=LOC111435815 PE=4 SV=1) HSP 1 Score: 393 bits (1009), Expect = 1.33e-137 Identity = 191/214 (89.25%), Postives = 197/214 (92.06%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy TrEMBL
Match: A0A6J1DPI0 (probable E3 ubiquitin-protein ligase RHB1A isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023100 PE=4 SV=1) HSP 1 Score: 389 bits (999), Expect = 2.02e-136 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0
BLAST of MC06g1861 vs. ExPASy TrEMBL
Match: A0A5A7TH60 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002410 PE=4 SV=1) HSP 1 Score: 389 bits (998), Expect = 5.87e-136 Identity = 185/212 (87.26%), Postives = 194/212 (91.51%), Query Frame = 0
BLAST of MC06g1861 vs. TAIR 10
Match: AT5G41350.1 (RING/U-box superfamily protein ) HSP 1 Score: 190.3 bits (482), Expect = 1.6e-48 Identity = 104/216 (48.15%), Postives = 141/216 (65.28%), Query Frame = 0
BLAST of MC06g1861 vs. TAIR 10
Match: AT4G00335.1 (RING-H2 finger B1A ) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41 Identity = 92/207 (44.44%), Postives = 128/207 (61.84%), Query Frame = 0
BLAST of MC06g1861 vs. TAIR 10
Match: AT4G00335.2 (RING-H2 finger B1A ) HSP 1 Score: 167.5 bits (423), Expect = 1.1e-41 Identity = 92/207 (44.44%), Postives = 128/207 (61.84%), Query Frame = 0
BLAST of MC06g1861 vs. TAIR 10
Match: AT4G00335.3 (RING-H2 finger B1A ) HSP 1 Score: 162.9 bits (411), Expect = 2.8e-40 Identity = 91/206 (44.17%), Postives = 125/206 (60.68%), Query Frame = 0
BLAST of MC06g1861 vs. TAIR 10
Match: AT3G02290.1 (RING/U-box superfamily protein ) HSP 1 Score: 99.4 bits (246), Expect = 3.8e-21 Identity = 60/180 (33.33%), Postives = 96/180 (53.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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