![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MC06g1860 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCATGGAGCCTAAGTTTTTTCCTCCGGCAAAATCCTATCTTTTGCGTTTTGGTTTTTGATTATGCAAGGTACCACACCATTGACTCCCTTTTTTTACAGCTTGAATCACTACTTCCGTGTCTGAACCGCCTTTGCGGGTGAGGAAAAACAAAGAAAAAAAGCTCATTTCTCTTCCTATTTCCATTTCTATTTCTTTCTCTCTTCTCCCCCAACCCACAACCCAGCAAAAATCAAGATAAACCAAAATCATGTCTTCTCCAAGCAAGCGACGCGAAATGGATTTGATGAAACTGTAAGTTCCCACGATTCCCATGGCTTCCCCGATTGGATTGTTCTCTCCTTTCTTCATCTTCTTCTGCTTTGACTGAATCAGGATGATGAGTGATTACAAGGTGGAGATGATCAATGATAGCATGCAGGAGTTCTATGTCGACTTCCATGGCCCTAAAGACAGTAAATCTTCTATACCCATGTTTGATTTCGTCCATTTTTTTGCTGTTTTTCATCTGATTCTTCTCTGGGGCTGGCTTTCTTGTATATTCTGTTGGGCCTGTCTCTTTTGGTTTCCCCCTTTTTCCTAAACCCCATGATTCATTGTTTTGAGGCATGTTGTGATTATAAGCTGACTTCCTCTGAATGAATTAATCTGTTTGGTTCTTCATTTCCTGAGTTTGTTGTCTGGTTCTGTTCCATTTCCTACATGACTAGTGTCAGATTAATCCGGAGCTGATGTTCAAAGCTTGTTTTTTTTGCTGACCCAGTTGATATATATGCAATTCTAGGCAATAGGAATTTGGATTGAGATGAGATGTTAACTTATCTTGTCTATTTTTTTCTTTATTTACTTTGTTGGCTTGAAATTGGAAGGTCTTTACCAAGGAGGTGTGTGGAGGATTAGGGTGGAGTTGCCAGATGCTTATCCTTACAAATCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCCAATGTTGATGAAATGTGAGTTGCCTGACTCCGCAACCACTACCCCGAAACCGAAACTGAAACCTACTACTCTGGTTCTTGCTATGGCTAGGGCCTTTTATTCTTATGGGGTAGATTGTTGACTGATATAGATGTTTATGAATTGCAGGTCGGGCTCGGTTTGTTTAGACGTTATCAACCAGACATGGAGCCCTATGTTTGGTAGGAACCATCACTATTCTTTTATTTGTGGAATTGTAATGTTATTGGTTCTGATGTATATAGTTTGGCAATCAATTGGTTTTTTCTTTGTGGAATTATAATGCTGCAATCGAATAATCGTGACCTCATTCGGGTTCTTTTTTGTCATGTAGACCTTGTAAATGTTTTCGAAGTGTTTCTTCCACAACTTCTCCTGTATCCCAACCCTTCTGATCCATTGAATGGAGAAGCTGCTGCGGTAATGATGCGTGATCGCACTGCATATGAACAAAGAGTAAAAGGTACTTCTATCGAAGATTTTATAGTTTAAGCATATTTTAAGCTGTTGGTTCGGGTGCTAACAGTAACACGAAACAAGATTTAGTAGTATCTTCATATGATAATGACATATATTAAGACATTCTTATTGCAAAGCTTTAAACCAGCAAACATACTGAGGACAATCTATTCATGTCAAAGGCCAAAAACATCAATGAATATCAATTCAGGCCTGCTTAATTTTCGGTCATTCATGTCGTGTTAATTCACTTGATAAACTTACTGGCCGAGCTTCATCTGTAATAGAAATTCCCATTTTAATGACATTCACCATTCAAGTGCACCCAACCTTTTTGTGTTCTGCATCTGTGATGACTAGAACATCGATTCTCATCTGCGAGAAATTGTTGATAGTGATCATCACAATGTAAGCCCCTGTCCCGACCGATTCTTTCTCATTTCACATTTTGGTTATTTATGTTTACAGAATACTGTGAGAAATACGCAAAGCCAGAAGACATTGGTGCTGTCCCTGAGGAGAAATCAAGTGATGAGGAGCTGAGTGAAGATGATTATGCCTCAAGTGATGAGGACATGGCAGGCCAAGCTGATGCTTGAATGGCAAAGATCAAGCCCCTTCTTCTGTACATTATTGAAAAACTCAGTAACCATAAAAAGAAATTGAAAGCTATGGAGAAGTTTCCAAGCTCTTCTGTCTCTGTATTTTCATGATAGTTGTGTACATTAATCAAACTATGATATAATGTTTCATATATTTCCATTTACCATTTAATCTAAAGTAACAAATATCATATACATTTCTTGATATATGTCTTTACCAAT ATTTCATGGAGCCTAAGTTTTTTCCTCCGGCAAAATCCTATCTTTTGCGTTTTGGTTTTTGATTATGCAAGCAAAAATCAAGATAAACCAAAATCATGTCTTCTCCAAGCAAGCGACGCGAAATGGATTTGATGAAACTGATGATGAGTGATTACAAGGTGGAGATGATCAATGATAGCATGCAGGAGTTCTATGTCGACTTCCATGGCCCTAAAGACAGTCTTTACCAAGGAGGTGTGTGGAGGATTAGGGTGGAGTTGCCAGATGCTTATCCTTACAAATCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCCAATGTTGATGAAATGTCGGGCTCGGTTTGTTTAGACGTTATCAACCAGACATGGAGCCCTATGTTTGACCTTGTAAATGTTTTCGAAGTGTTTCTTCCACAACTTCTCCTGTATCCCAACCCTTCTGATCCATTGAATGGAGAAGCTGCTGCGGTAATGATGCGTGATCGCACTGCATATGAACAAAGAGTAAAAGAATACTGTGAGAAATACGCAAAGCCAGAAGACATTGGTGCTGTCCCTGAGGAGAAATCAAGTGATGAGGAGCTGAGTGAAGATGATTATGCCTCAAGTGATGAGGACATGGCAGGCCAAGCTGATGCTTGAATGGCAAAGATCAAGCCCCTTCTTCTGTACATTATTGAAAAACTCAGTAACCATAAAAAGAAATTGAAAGCTATGGAGAAGTTTCCAAGCTCTTCTGTCTCTGTATTTTCATGATAGTTGTGTACATTAATCAAACTATGATATAATGTTTCATATATTTCCATTTACCATTTAATCTAAAGTAACAAATATCATATACATTTCTTGATATATGTCTTTACCAAT ATGTCTTCTCCAAGCAAGCGACGCGAAATGGATTTGATGAAACTGATGATGAGTGATTACAAGGTGGAGATGATCAATGATAGCATGCAGGAGTTCTATGTCGACTTCCATGGCCCTAAAGACAGTCTTTACCAAGGAGGTGTGTGGAGGATTAGGGTGGAGTTGCCAGATGCTTATCCTTACAAATCACCTTCAATTGGCTTTGTCAACAAAATTTATCATCCCAATGTTGATGAAATGTCGGGCTCGGTTTGTTTAGACGTTATCAACCAGACATGGAGCCCTATGTTTGACCTTGTAAATGTTTTCGAAGTGTTTCTTCCACAACTTCTCCTGTATCCCAACCCTTCTGATCCATTGAATGGAGAAGCTGCTGCGGTAATGATGCGTGATCGCACTGCATATGAACAAAGAGTAAAAGAATACTGTGAGAAATACGCAAAGCCAGAAGACATTGGTGCTGTCCCTGAGGAGAAATCAAGTGATGAGGAGCTGAGTGAAGATGATTATGCCTCAAGTGATGAGGACATGGCAGGCCAAGCTGATGCTTGA MSSPSKRREMDLMKLMMSDYKVEMINDSMQEFYVDFHGPKDSLYQGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFEVFLPQLLLYPNPSDPLNGEAAAVMMRDRTAYEQRVKEYCEKYAKPEDIGAVPEEKSSDEELSEDDYASSDEDMAGQADA Homology
BLAST of MC06g1860 vs. ExPASy Swiss-Prot
Match: P42748 (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana OX=3702 GN=UBC4 PE=2 SV=2) HSP 1 Score: 309.7 bits (792), Expect = 2.2e-83 Identity = 151/176 (85.80%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy Swiss-Prot
Match: P16577 (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 7.2e-82 Identity = 148/183 (80.87%), Postives = 164/183 (89.62%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy Swiss-Prot
Match: P42749 (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2) HSP 1 Score: 304.7 bits (779), Expect = 7.2e-82 Identity = 152/187 (81.28%), Postives = 166/187 (88.77%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy Swiss-Prot
Match: P42750 (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana OX=3702 GN=UBC6 PE=2 SV=2) HSP 1 Score: 280.4 bits (716), Expect = 1.4e-74 Identity = 133/182 (73.08%), Postives = 156/182 (85.71%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy Swiss-Prot
Match: Q9P7R4 (Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc8 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.1e-61 Identity = 111/183 (60.66%), Postives = 144/183 (78.69%), Query Frame = 0
BLAST of MC06g1860 vs. NCBI nr
Match: XP_022159827.1 (ubiquitin-conjugating enzyme E2 4-like [Momordica charantia]) HSP 1 Score: 369 bits (946), Expect = 1.13e-128 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of MC06g1860 vs. NCBI nr
Match: XP_004143895.1 (ubiquitin-conjugating enzyme E2 4 [Cucumis sativus] >XP_008437307.1 PREDICTED: ubiquitin-conjugating enzyme E2 4-like [Cucumis melo] >XP_038906796.1 ubiquitin-conjugating enzyme E2 4-like [Benincasa hispida] >KAA0042743.1 ubiquitin-conjugating enzyme E2 4-like isoform X1 [Cucumis melo var. makuwa] >KGN50082.1 hypothetical protein Csa_000238 [Cucumis sativus]) HSP 1 Score: 360 bits (925), Expect = 1.80e-125 Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of MC06g1860 vs. NCBI nr
Match: XP_022996146.1 (ubiquitin-conjugating enzyme E2 4-like [Cucurbita maxima]) HSP 1 Score: 354 bits (908), Expect = 7.02e-123 Identity = 174/183 (95.08%), Postives = 179/183 (97.81%), Query Frame = 0
BLAST of MC06g1860 vs. NCBI nr
Match: XP_030946370.1 (ubiquitin-conjugating enzyme E2 4-like [Quercus lobata] >KAF3972056.1 hypothetical protein CMV_004407 [Castanea mollissima]) HSP 1 Score: 353 bits (906), Expect = 1.42e-122 Identity = 173/182 (95.05%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of MC06g1860 vs. NCBI nr
Match: XP_022929074.1 (ubiquitin-conjugating enzyme E2 4-like [Cucurbita moschata] >XP_022970107.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita maxima] >XP_023549616.1 ubiquitin-conjugating enzyme E2 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 353 bits (906), Expect = 1.42e-122 Identity = 173/182 (95.05%), Postives = 179/182 (98.35%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy TrEMBL
Match: A0A6J1E0W4 (ubiquitin-conjugating enzyme E2 4-like OS=Momordica charantia OX=3673 GN=LOC111026131 PE=3 SV=1) HSP 1 Score: 369 bits (946), Expect = 5.45e-129 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy TrEMBL
Match: A0A5A7THI1 (Ubiquitin-conjugating enzyme E2 4-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002420 PE=3 SV=1) HSP 1 Score: 360 bits (925), Expect = 8.69e-126 Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy TrEMBL
Match: A0A0A0KNV9 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152970 PE=3 SV=1) HSP 1 Score: 360 bits (925), Expect = 8.69e-126 Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy TrEMBL
Match: A0A1S3AUA7 (ubiquitin-conjugating enzyme E2 4-like OS=Cucumis melo OX=3656 GN=LOC103482765 PE=3 SV=1) HSP 1 Score: 360 bits (925), Expect = 8.69e-126 Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0
BLAST of MC06g1860 vs. ExPASy TrEMBL
Match: A0A6J1K3W2 (ubiquitin-conjugating enzyme E2 4-like OS=Cucurbita maxima OX=3661 GN=LOC111491458 PE=3 SV=1) HSP 1 Score: 354 bits (908), Expect = 3.40e-123 Identity = 174/183 (95.08%), Postives = 179/183 (97.81%), Query Frame = 0
BLAST of MC06g1860 vs. TAIR 10
Match: AT5G41340.1 (ubiquitin conjugating enzyme 4 ) HSP 1 Score: 309.7 bits (792), Expect = 1.6e-84 Identity = 151/176 (85.80%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of MC06g1860 vs. TAIR 10
Match: AT1G63800.1 (ubiquitin-conjugating enzyme 5 ) HSP 1 Score: 304.7 bits (779), Expect = 5.1e-83 Identity = 152/187 (81.28%), Postives = 166/187 (88.77%), Query Frame = 0
BLAST of MC06g1860 vs. TAIR 10
Match: AT2G46030.1 (ubiquitin-conjugating enzyme 6 ) HSP 1 Score: 280.4 bits (716), Expect = 1.0e-75 Identity = 133/182 (73.08%), Postives = 156/182 (85.71%), Query Frame = 0
BLAST of MC06g1860 vs. TAIR 10
Match: AT5G56150.1 (ubiquitin-conjugating enzyme 30 ) HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21 Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 0
BLAST of MC06g1860 vs. TAIR 10
Match: AT5G56150.2 (ubiquitin-conjugating enzyme 30 ) HSP 1 Score: 100.5 bits (249), Expect = 1.5e-21 Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|