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MC06g1834 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGCATAATGCGATTTTTCCAATTGAGTTTTGTGTCTCAGTCGTTGTTTGGACTGAAATGAGCTTGGTAGGAGAGAATTTTGCTTCGATTTGGTTGGTGGGGACTCTTTTATAAAATTGGGTTTTGTGGATTAAGGAGGTTGTTCGTGATTTTGTTTTTCTTTTTTCTCTGAATGAATGAATTATTCGGTTCACTTGCGACATGTAATGCAATCGTCTCTCATTGTATTTTATGTCTCAGTCGTTTGTTTGGACTGGAAGAAATTTGGTAGGTGGAAATTTTGCTTCAATTGGTTGGTGGACTTTGTTTGTTTATTTCTTTTTGGTTTTTGGATGAGGACTGAGCTGCAGATATTTTCCATTTCAATTTAGGGTGAGAGAAATTTGGTAAAGGGATGATGCTCTGATATGTCAGCCAAGGATTTTTGTTCAATAGATTCAATTTTGAGGAGTTTGGAATTTGAGTAACCTTTCAATATGTCGGAATGCCCTTCAAATGATGTAAAGACCAGCACCATAGCTAATTCAAGCGATGAATCCGACCTCGAGAAGCAGCGGGGAGCTCAGCCATCAGCATCAGAGCCCTCTGCCAGTGATGCTGATGATCATACTCGGTTGACGATTGTTGTTTCAACTGGGGAGCCCAAACCAGTCTCCGAGGTTCCTACGACGACGGCAACCCGGTTGTCTCACGAAGAAGAATCGCCTGGTATAGTTTCCCCCAAAAAGGAGCTCTTGTCTATGGCTTCCAGTTCTGATGAGCAGTGCAGGTAACTTCAAACGCACTGCTCTTCCCTGAAAAATGATATTCTAATTGTTGTAGATCATTTCTGAATTATGAAGTCGAATAATTACTTTCTGCTGGTCCATTTTGGTTACCTCATGCTGTTGTTAATTTTTTTTGTTCATTGCTCAATCTTTTGGCAGATCTAAAAACATGAGATACTTTCAAGTCTTCCTGGAGGACTAAACCCAAAAGCTAAATTTGACAAATTATGATATATTTAATCTTTTATACATATTGTTAATCCTCTCTTTCTCTCTCTCGTTTGAATCACCATCAGCACATGACCAATTAATATCAATTGGGAGAGGAAATAGGGGTTTTGATCAACTATCGCTAAATTTGAAAACTTAAGTTGATAAGTTTGATATGTAGGCATCATAATACTATTGATTTTCTTTATGGAGTCATACCTGTTATATACATGATATACAGATAACTTTTCTTCAAATATTCTTGTCTTTCATTCAGTTGACATGTTATTTGCATTATGGTGGAGTATGTCCACAATTACCATTGGCTTCATTTATCTGGTTAATATGTTGTAAAGGAAGTTGAGGCCATTAAGTCTGAGTACTATTATTCAGAATTTGTCAGCAAGAGAAGGAAGAAGCCTTGATAGAACTTGGATGTCAATGTCGAGGCGGTCTCGCTAAAGCTCACCGAACTTGTATAGATACTTGGTTTCGGACTAAAGGATCAAACAGATGTGAGATATGCCAGTAAGTTAGCTATTTGAGGATGACTTTCATTAATTTTACAGAATGATATTGTATTGGGGGCATTCTGAAATGTAGTTTTTCTAATTTTGCAGGGTTATAGCAGCGAATGTATCACCTCCCCAATCACATCATGGTGTAGGTATTCTAGCTCATGGTGCAATGCTTTTGATTAATTCCTTTTCCATCTTCGTTAAGCCTAATTTTAAAGCATATTAAATCAGACACTTCAATGAATATTGAATCAGTATTTTATCTTCACTATAGTATCAAATGTTGCGAGTTGTTGTTCAATGTTTTTGGTTCTGCAGTTGATGTACTGGTATGTATTATATGGAGATGAATTCTAGACTTGTTCTCTCTTCACTTTTGCATTCGCTACATTTTTGAAAGGCTTTTTGCAGTAGAATAATGGATATTTGCAAAAAAAAAAAAAAATCTTTGATGTCTCCTAGGTCCAAGCCTTGAGGCAAGCGTGAGTACCCGTGGATATAGGGGAGCAAAGCTCCGACCCCCTTTATCAAAAAGAAAAAAAAAAGGATATTTGCAAATATATGTCCAGTGTATTGAATCTAAGTTACTGGTTTACCTGGAATTGAAATGAAATATGGAAAGATATTATAGGTGAGGACAACAGGTTATCATTCACAACGTTTCCTCCCCTCTAAAAGAATATTTTAGCTTATGAATGAAATAGTTTGTTGAGAAAGAGGCAATGTGCAAAGTGAATCACCCCAAAACTATATACAAAGAAAACCAAAATCCTGTAATAATTTACACAGCTCGAAAATTATTATGGTTAATGTTTTGCTCTAAAGACAAGCTTTCTTTTGCTTTGTATGTTTTGTCGCTGTCTATTCAAACTACTGATTCATGAGAATTGCAAATTTACGTGTCACTATACATTTAGCATTAACTTATGATCTCGATGGATGTCGCAAGTAACTTGAACTTCGGTTGTTTCTTATATTTGACAAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACCCAAGATCCTGAGAGGGTAAAAGGTCCATTTTTCTACTGATATCCTTGTTTCATTAGTCAAAAACATCAACCTTCATATTTTATTTATGCAGCAGCACTGCTTCAGTCCACTTTGGTTGGCTTTTGCTATCCTCATAGGGGGTCTGCTATTGGATGTTCTTATATCAATTACCCTCGGTGTTTCTGCATTGCCTGTAAATATCATCATCGGTACGTTTTTAAAAGTCCTTTTTGCAGAACAAGCTATCTAGTTTCATGTTGTGCATGTTTATGGTAATTGAAAACCTTGAAGAACAGGAGTCATTGTGGTGCTTGGACTTGGAACCGTGTTTCGACTTGCGCTCGAGTTCTTCCAGGAGTGGAGTTCAACAAGAGGGTTGCAGAGAGTCGAATCGAACATCACTATTGGGTACTATCCAGCTATA GTGCATAATGCGATTTTTCCAATTGAGTTTTGTGTCTCAGTCGTTGTTTGGACTGAAATGAGCTTGGTAGGAGAGAATTTTGCTTCGATTTGGTTGGTGGGGACTCTTTTATAAAATTGGGTTTTGTGGATTAAGGAGGTTGTTCGTGATTTTGTTTTTCTTTTTTCTCTGAATGAATGAATTATTCGGTTCACTTGCGACATGTAATGCAATCGTCTCTCATTGTATTTTATGTCTCAGTCGTTTGTTTGGACTGGAAGAAATTTGGGTGAGAGAAATTTGGTAAAGGGATGATGCTCTGATATGTCAGCCAAGGATTTTTGTTCAATAGATTCAATTTTGAGGAGTTTGGAATTTGAGTAACCTTTCAATATGTCGGAATGCCCTTCAAATGATGTAAAGACCAGCACCATAGCTAATTCAAGCGATGAATCCGACCTCGAGAAGCAGCGGGGAGCTCAGCCATCAGCATCAGAGCCCTCTGCCAGTGATGCTGATGATCATACTCGGTTGACGATTGTTGTTTCAACTGGGGAGCCCAAACCAGTCTCCGAGGTTCCTACGACGACGGCAACCCGGTTGTCTCACGAAGAAGAATCGCCTGGTATAGTTTCCCCCAAAAAGGAGCTCTTGTCTATGGCTTCCAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAAGAAGCCTTGATAGAACTTGGATGTCAATGTCGAGGCGGTCTCGCTAAAGCTCACCGAACTTGTATAGATACTTGGTTTCGGACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTATAGCAGCGAATGTATCACCTCCCCAATCACATCATGGTGTAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACCCAAGATCCTGAGAGGGTAAAAGTCAAAAACATCAACCTTCATATTTTATTTATGCAGCAGCACTGCTTCAGTCCACTTTGGTTGGCTTTTGCTATCCTCATAGGGGGTCTGCTATTGGATGTTCTTATATCAATTACCCTCGGTGTTTCTGCATTGCCTGTAAATATCATCATCGGAGTCATTGTGGTGCTTGGACTTGGAACCGTGTTTCGACTTGCGCTCGAGTTCTTCCAGGAGTGGAGTTCAACAAGAGGGTTGCAGAGAGTCGAATCGAACATCACTATTGGGTACTATCCAGCTATA ATGTCGGAATGCCCTTCAAATGATGTAAAGACCAGCACCATAGCTAATTCAAGCGATGAATCCGACCTCGAGAAGCAGCGGGGAGCTCAGCCATCAGCATCAGAGCCCTCTGCCAGTGATGCTGATGATCATACTCGGTTGACGATTGTTGTTTCAACTGGGGAGCCCAAACCAGTCTCCGAGGTTCCTACGACGACGGCAACCCGGTTGTCTCACGAAGAAGAATCGCCTGGTATAGTTTCCCCCAAAAAGGAGCTCTTGTCTATGGCTTCCAGTTCTGATGAGCAGTGCAGAATTTGTCAGCAAGAGAAGGAAGAAGCCTTGATAGAACTTGGATGTCAATGTCGAGGCGGTCTCGCTAAAGCTCACCGAACTTGTATAGATACTTGGTTTCGGACTAAAGGATCAAACAGATGTGAGATATGCCAGGTTATAGCAGCGAATGTATCACCTCCCCAATCACATCATGGTGTAGCACAGACCAACTACTGGATTTGGAGGATTGATCCAACCTACAGAACCCAAGATCCTGAGAGGGTAAAAGTCAAAAACATCAACCTTCATATTTTATTTATGCAGCAGCACTGCTTCAGTCCACTTTGGTTGGCTTTTGCTATCCTCATAGGGGGTCTGCTATTGGATGTTCTTATATCAATTACCCTCGGTGTTTCTGCATTGCCTGTAAATATCATCATCGGAGTCATTGTGGTGCTTGGACTTGGAACCGTGTTTCGACTTGCGCTCGAGTTCTTCCAGGAGTGGAGTTCAACAAGAGGGTTGCAGAGAGTCGAATCGAACATCACTATTGGGTACTATCCAGCTATA MSECPSNDVKTSTIANSSDESDLEKQRGAQPSASEPSASDADDHTRLTIVVSTGEPKPVSEVPTTTATRLSHEEESPGIVSPKKELLSMASSSDEQCRICQQEKEEALIELGCQCRGGLAKAHRTCIDTWFRTKGSNRCEICQVIAANVSPPQSHHGVAQTNYWIWRIDPTYRTQDPERVKVKNINLHILFMQQHCFSPLWLAFAILIGGLLLDVLISITLGVSALPVNIIIGVIVVLGLGTVFRLALEFFQEWSSTRGLQRVESNITIGYYPAI Homology
BLAST of MC06g1834 vs. NCBI nr
Match: XP_022159784.1 (E3 ubiquitin-protein ligase MARCH2 isoform X2 [Momordica charantia]) HSP 1 Score: 488 bits (1255), Expect = 5.43e-173 Identity = 258/275 (93.82%), Postives = 258/275 (93.82%), Query Frame = 0
BLAST of MC06g1834 vs. NCBI nr
Match: XP_022159785.1 (E3 ubiquitin-protein ligase MARCH2 isoform X3 [Momordica charantia]) HSP 1 Score: 485 bits (1249), Expect = 4.30e-172 Identity = 257/275 (93.45%), Postives = 257/275 (93.45%), Query Frame = 0
BLAST of MC06g1834 vs. NCBI nr
Match: XP_038875308.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X3 [Benincasa hispida]) HSP 1 Score: 393 bits (1010), Expect = 1.17e-135 Identity = 215/277 (77.62%), Postives = 229/277 (82.67%), Query Frame = 0
BLAST of MC06g1834 vs. NCBI nr
Match: XP_038875309.1 (E3 ubiquitin-protein ligase MARCHF2 isoform X4 [Benincasa hispida]) HSP 1 Score: 391 bits (1004), Expect = 9.28e-135 Identity = 214/277 (77.26%), Postives = 228/277 (82.31%), Query Frame = 0
BLAST of MC06g1834 vs. NCBI nr
Match: XP_004145881.1 (E3 ubiquitin-protein ligase MARCH2 [Cucumis sativus] >XP_031742128.1 E3 ubiquitin-protein ligase MARCH2 [Cucumis sativus] >KGN49961.1 hypothetical protein Csa_000267 [Cucumis sativus]) HSP 1 Score: 379 bits (972), Expect = 7.93e-130 Identity = 207/275 (75.27%), Postives = 219/275 (79.64%), Query Frame = 0
BLAST of MC06g1834 vs. ExPASy TrEMBL
Match: A0A6J1E3C4 (E3 ubiquitin-protein ligase MARCH2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026101 PE=4 SV=1) HSP 1 Score: 488 bits (1255), Expect = 2.63e-173 Identity = 258/275 (93.82%), Postives = 258/275 (93.82%), Query Frame = 0
BLAST of MC06g1834 vs. ExPASy TrEMBL
Match: A0A6J1DZR7 (E3 ubiquitin-protein ligase MARCH2 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111026101 PE=4 SV=1) HSP 1 Score: 485 bits (1249), Expect = 2.08e-172 Identity = 257/275 (93.45%), Postives = 257/275 (93.45%), Query Frame = 0
BLAST of MC06g1834 vs. ExPASy TrEMBL
Match: A0A0A0KQJ1 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G146840 PE=4 SV=1) HSP 1 Score: 379 bits (972), Expect = 3.84e-130 Identity = 207/275 (75.27%), Postives = 219/275 (79.64%), Query Frame = 0
BLAST of MC06g1834 vs. ExPASy TrEMBL
Match: A0A5A7TM25 (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001330 PE=4 SV=1) HSP 1 Score: 376 bits (966), Expect = 3.14e-129 Identity = 210/275 (76.36%), Postives = 222/275 (80.73%), Query Frame = 0
BLAST of MC06g1834 vs. ExPASy TrEMBL
Match: A0A1S3AU77 (E3 ubiquitin-protein ligase MARCH2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482880 PE=4 SV=1) HSP 1 Score: 376 bits (965), Expect = 4.46e-129 Identity = 210/275 (76.36%), Postives = 222/275 (80.73%), Query Frame = 0
BLAST of MC06g1834 vs. TAIR 10
Match: AT2G45530.1 (RING/U-box superfamily protein ) HSP 1 Score: 251.5 bits (641), Expect = 7.7e-67 Identity = 149/270 (55.19%), Postives = 177/270 (65.56%), Query Frame = 0
BLAST of MC06g1834 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 2.7e-11 Identity = 46/130 (35.38%), Postives = 59/130 (45.38%), Query Frame = 0
BLAST of MC06g1834 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 3.5e-11 Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 0
BLAST of MC06g1834 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 3.3e-09 Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = 0
BLAST of MC06g1834 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 4.3e-09 Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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