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MC06g1827 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGTACGATCTGCTTGAGTAAAATGGAGAAATCGGAGAAGATGAGAGAGCTCTCCAATTGCTGCCATGTCTTCCACAAGGAGTGTTTGGATACGTGGATAGACGAATTCCAGATTACTTGCCCTATTTGTAGATCCATGCTTTTG TGTACGATCTGCTTGAGTAAAATGGAGAAATCGGAGAAGATGAGAGAGCTCTCCAATTGCTGCCATGTCTTCCACAAGGAGTGTTTGGATACGTGGATAGACGAATTCCAGATTACTTGCCCTATTTGTAGATCCATGCTTTTG TGTACGATCTGCTTGAGTAAAATGGAGAAATCGGAGAAGATGAGAGAGCTCTCCAATTGCTGCCATGTCTTCCACAAGGAGTGTTTGGATACGTGGATAGACGAATTCCAGATTACTTGCCCTATTTGTAGATCCATGCTTTTG CTICLSKMEKSEKMRELSNCCHVFHKECLDTWIDEFQITCPICRSMLL Homology
BLAST of MC06g1827 vs. ExPASy Swiss-Prot
Match: Q9ZT50 (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.3e-10 Identity = 25/48 (52.08%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 3.6e-09 Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy Swiss-Prot
Match: Q9SUS5 (E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 6.2e-09 Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 6.2e-09 Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.1e-08 Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MC06g1827 vs. NCBI nr
Match: XP_022159502.1 (RING-H2 finger protein ATL2-like [Momordica charantia]) HSP 1 Score: 108 bits (271), Expect = 1.86e-28 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of MC06g1827 vs. NCBI nr
Match: XP_022996076.1 (RING-H2 finger protein ATL46-like [Cucurbita maxima]) HSP 1 Score: 94.7 bits (234), Expect = 6.42e-23 Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of MC06g1827 vs. NCBI nr
Match: XP_023520502.1 (RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo] >KAG7017057.1 RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 94.0 bits (232), Expect = 1.25e-22 Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 0
BLAST of MC06g1827 vs. NCBI nr
Match: XP_038907243.1 (RING-H2 finger protein ATL2-like [Benincasa hispida]) HSP 1 Score: 94.0 bits (232), Expect = 1.25e-22 Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 0
BLAST of MC06g1827 vs. NCBI nr
Match: XP_023533023.1 (RING-H2 finger protein ATL2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 92.0 bits (227), Expect = 5.70e-22 Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy TrEMBL
Match: A0A6J1E009 (RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111025900 PE=4 SV=1) HSP 1 Score: 108 bits (271), Expect = 9.02e-29 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy TrEMBL
Match: A0A6J1K3P6 (RING-H2 finger protein ATL46-like OS=Cucurbita maxima OX=3661 GN=LOC111491392 PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 3.11e-23 Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy TrEMBL
Match: A0A438DBU0 (E3 ubiquitin-protein ligase RHA1B OS=Vitis vinifera OX=29760 GN=RHA1B_6 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.75e-20 Identity = 33/47 (70.21%), Postives = 43/47 (91.49%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy TrEMBL
Match: A0A1R3K6P6 (Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_10837 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 9.13e-20 Identity = 33/47 (70.21%), Postives = 41/47 (87.23%), Query Frame = 0
BLAST of MC06g1827 vs. ExPASy TrEMBL
Match: A0A6J1AZI3 (E3 ubiquitin-protein ligase RHA2B-like OS=Herrania umbratica OX=108875 GN=LOC110422628 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.55e-19 Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0
BLAST of MC06g1827 vs. TAIR 10
Match: AT1G15100.1 (RING-H2 finger A2A ) HSP 1 Score: 64.7 bits (156), Expect = 2.3e-11 Identity = 25/48 (52.08%), Postives = 38/48 (79.17%), Query Frame = 0
BLAST of MC06g1827 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 ) HSP 1 Score: 61.2 bits (147), Expect = 2.6e-10 Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 0
BLAST of MC06g1827 vs. TAIR 10
Match: AT3G43430.1 (RING/U-box superfamily protein ) HSP 1 Score: 60.1 bits (144), Expect = 5.7e-10 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of MC06g1827 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein ) HSP 1 Score: 59.7 bits (143), Expect = 7.5e-10 Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
BLAST of MC06g1827 vs. TAIR 10
Match: AT3G60220.1 (TOXICOS EN LEVADURA 4 ) HSP 1 Score: 59.7 bits (143), Expect = 7.5e-10 Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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