MC06g1370 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1370
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC06: 20892366 .. 20892686 (-)
RNA-Seq Expression	MC06g1370
Synteny	MC06g1370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTCCAATTCCAGTTCCAAATCAAAGGCAAGCAACGGGAAGAGCGAATCCGCCATAGCCATGGAGAATCAGAGCACCTGCTTGTCGTACGAGAAGCTCAACGGCATGGCCACATGGGTCGGAACCAGCGTCGCCTCCGCCTTCTTCGCCTCCCTCGAGCGCTGCTCCTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAGGAGGCTCACGATCGCCCTCTCATGTACTGCAACTCCACCTCCTCCTCCGTCGTCATCCGCAGCTTCGAGCCTCTTCCTCCGCCGGTCAACGACGTCGCCAATCTCCCCGTC

mRNA sequence

AATTCCAATTCCAGTTCCAAATCAAAGGCAAGCAACGGGAAGAGCGAATCCGCCATAGCCATGGAGAATCAGAGCACCTGCTTGTCGTACGAGAAGCTCAACGGCATGGCCACATGGGTCGGAACCAGCGTCGCCTCCGCCTTCTTCGCCTCCCTCGAGCGCTGCTCCTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAGGAGGCTCACGATCGCCCTCTCATGTACTGCAACTCCACCTCCTCCTCCGTCGTCATCCGCAGCTTCGAGCCTCTTCCTCCGCCGGTCAACGACGTCGCCAATCTCCCCGTC

Coding sequence (CDS)

AATTCCAATTCCAGTTCCAAATCAAAGGCAAGCAACGGGAAGAGCGAATCCGCCATAGCCATGGAGAATCAGAGCACCTGCTTGTCGTACGAGAAGCTCAACGGCATGGCCACATGGGTCGGAACCAGCGTCGCCTCCGCCTTCTTCGCCTCCCTCGAGCGCTGCTCCTGCATCAATCTCTCCACCTCCGACGACCACGAAGATCCCGAGGAGGCTCACGATCGCCCTCTCATGTACTGCAACTCCACCTCCTCCTCCGTCGTCATCCGCAGCTTCGAGCCTCTTCCTCCGCCGGTCAACGACGTCGCCAATCTCCCCGTC

Protein sequence

NSNSSSKSKASNGKSESAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYCNSTSSSVVIRSFEPLPPPVNDVANLPV

Homology

[Close]

BLAST of MC06g1370 vs. NCBI nr
Match: XP_038875439.1 (uncharacterized protein LOC120067894 [Benincasa hispida] >XP_038875440.1 uncharacterized protein LOC120067894 [Benincasa hispida] >XP_038875441.1 uncharacterized protein LOC120067894 [Benincasa hispida] >XP_038875442.1 uncharacterized protein LOC120067894 [Benincasa hispida])

HSP 1 Score: 180 bits (457), Expect = 1.98e-56
Identity = 89/94 (94.68%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 14  KSESAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH 73
           K +SAIAMENQSTCLSYEKLNG+A+WVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH
Sbjct: 24  KKKSAIAMENQSTCLSYEKLNGVASWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH 83

Query: 74  DRPLMYCNSTSSSVVIRSFEPLPPPVNDVANLPV 107
           DRPLMYC STSSSVVIRSFEPLPPPVNDVANLPV
Sbjct: 84  DRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV 117

[Close]

BLAST of MC06g1370 vs. NCBI nr
Match: XP_008437637.1 (PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437638.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437639.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437640.1 PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo])

HSP 1 Score: 180 bits (456), Expect = 3.09e-56
Identity = 89/94 (94.68%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 14  KSESAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH 73
           K +S I MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH
Sbjct: 27  KKKSVIPMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH 86

Query: 74  DRPLMYCNSTSSSVVIRSFEPLPPPVNDVANLPV 107
           DRPLMYC STSSSVVIRSFEPLPPPVNDVANLPV
Sbjct: 87  DRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV 120

[Close]

BLAST of MC06g1370 vs. NCBI nr
Match: XP_022137766.1 (uncharacterized protein LOC111009130 [Momordica charantia] >XP_022137767.1 uncharacterized protein LOC111009130 [Momordica charantia] >XP_022137768.1 uncharacterized protein LOC111009130 [Momordica charantia])

HSP 1 Score: 178 bits (451), Expect = 6.37e-56
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 21  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 80
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 81  NSTSSSVVIRSFEPLPPPVNDVANLPV 107
           NSTSSSVVIRSFEPLPPPVNDVANLPV
Sbjct: 61  NSTSSSVVIRSFEPLPPPVNDVANLPV 87

[Close]

BLAST of MC06g1370 vs. NCBI nr
Match: KAG7016815.1 (hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176 bits (446), Expect = 5.51e-55
Identity = 88/95 (92.63%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 13  GKSESAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEA 72
           GK+ESAIAMENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EA
Sbjct: 7   GKNESAIAMENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEA 66

Query: 73  HDRPLMYCNSTSSSVVIRSFEPLPPPVNDVANLPV 107
           HDRPLMYC STSSS+ IRSFEPLPPPVNDVANLPV
Sbjct: 67  HDRPLMYCTSTSSSI-IRSFEPLPPPVNDVANLPV 100

[Close]

BLAST of MC06g1370 vs. NCBI nr
Match: XP_031742148.1 (uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus])

HSP 1 Score: 173 bits (439), Expect = 1.37e-53
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 14  KSESAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH 73
           K +S I MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH
Sbjct: 32  KKKSPIPMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH 91

Query: 74  DRPLMYCNSTSSSVVIRSFEPLPPPVNDVANLPV 107
           DRPLMYC STSSSV IRSFEPLPPPVNDVANLPV
Sbjct: 92  DRPLMYCTSTSSSV-IRSFEPLPPPVNDVANLPV 124

[Close]

BLAST of MC06g1370 vs. ExPASy TrEMBL
Match: A0A1S3AU63 (uncharacterized protein LOC103482984 OS=Cucumis melo OX=3656 GN=LOC103482984 PE=4 SV=1)

HSP 1 Score: 180 bits (456), Expect = 1.50e-56
Identity = 89/94 (94.68%), Postives = 90/94 (95.74%), Query Frame = 0


Query: 14  KSESAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH 73
           K +S I MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH
Sbjct: 27  KKKSVIPMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAH 86

Query: 74  DRPLMYCNSTSSSVVIRSFEPLPPPVNDVANLPV 107
           DRPLMYC STSSSVVIRSFEPLPPPVNDVANLPV
Sbjct: 87  DRPLMYCTSTSSSVVIRSFEPLPPPVNDVANLPV 120

[Close]

BLAST of MC06g1370 vs. ExPASy TrEMBL
Match: A0A6J1C970 (uncharacterized protein LOC111009130 OS=Momordica charantia OX=3673 GN=LOC111009130 PE=4 SV=1)

HSP 1 Score: 178 bits (451), Expect = 3.09e-56
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 21  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 80
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 81  NSTSSSVVIRSFEPLPPPVNDVANLPV 107
           NSTSSSVVIRSFEPLPPPVNDVANLPV
Sbjct: 61  NSTSSSVVIRSFEPLPPPVNDVANLPV 87

[Close]

BLAST of MC06g1370 vs. ExPASy TrEMBL
Match: A0A0A0KLU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139175 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 6.80e-53
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 21  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 80
           MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 60

Query: 81  NSTSSSVVIRSFEPLPPPVNDVANLPV 107
            STSSSV IRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSV-IRSFEPLPPPVNDVANLPV 86

[Close]

BLAST of MC06g1370 vs. ExPASy TrEMBL
Match: A0A6J1E5Z9 (uncharacterized protein LOC111430272 OS=Cucurbita moschata OX=3662 GN=LOC111430272 PE=4 SV=1)

HSP 1 Score: 164 bits (416), Expect = 6.53e-51
Identity = 82/87 (94.25%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 21  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 80
           MENQSTCLSYEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYC
Sbjct: 1   MENQSTCLSYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYC 60

Query: 81  NSTSSSVVIRSFEPLPPPVNDVANLPV 107
            STSSSV IRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSV-IRSFEPLPPPVNDVANLPV 86

[Close]

BLAST of MC06g1370 vs. ExPASy TrEMBL
Match: A0A6J1ID63 (uncharacterized protein LOC111471501 OS=Cucurbita maxima OX=3661 GN=LOC111471501 PE=4 SV=1)

HSP 1 Score: 163 bits (412), Expect = 2.66e-50
Identity = 80/87 (91.95%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 21  MENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPEEAHDRPLMYC 80
           MENQSTCL+YEKLNG+ATWVGTSVASAFFASLE CSCINLSTSDDHEDP+EAHDRPLMYC
Sbjct: 1   MENQSTCLTYEKLNGVATWVGTSVASAFFASLESCSCINLSTSDDHEDPDEAHDRPLMYC 60

Query: 81  NSTSSSVVIRSFEPLPPPVNDVANLPV 107
            STSSS+ IRSFEPLPPPVNDVANLPV
Sbjct: 61  TSTSSSI-IRSFEPLPPPVNDVANLPV 86

[Close]

BLAST of MC06g1370 vs. TAIR 10
Match: AT4G10810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24026.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 72.8 bits (177), Expect = 1.9e-13
Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0


Query: 11 SNGKSESAIAMENQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTSDDHEDPE 70
          S+  + +A    N ST  S EKL+  A+WV T+V SAFFASLERCSC+NLSTSDD ++ E
Sbjct: 4  SSSINSTASTASNLSTA-SLEKLDQAASWVSTTVISAFFASLERCSCVNLSTSDDDDEGE 63

Query: 71 EAHDRPL 78
          E+H+RPL
Sbjct: 64 ESHNRPL 69

[Close]

BLAST of MC06g1370 vs. TAIR 10
Match: AT4G24026.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-11
Identity = 32/57 (56.14%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 23 NQSTCLSYEKLNGMATWVGTSVASAFFASLERCSCINLSTS--DDHEDPEEAHDRPL 78
          N ST  S EK++  A+W+  +V SAFF SLERC+C+NLSTS  DD +D +E+H RPL
Sbjct: 10 NVSTTTSMEKIDHAASWISATVISAFFTSLERCACVNLSTSHDDDDDDDDESHHRPL 66

The following BLAST results are available for this feature:

BLAST of MC06g1370 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g1370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875439.1	1.98e-56	94.68	uncharacterized protein LOC120067894 [Benincasa hispida] >XP_038875440.1 unchara...	[more]
XP_008437637.1	3.09e-56	94.68	PREDICTED: uncharacterized protein LOC103482984 [Cucumis melo] >XP_008437638.1 P...	[more]
XP_022137766.1	6.37e-56	100.00	uncharacterized protein LOC111009130 [Momordica charantia] >XP_022137767.1 uncha...	[more]
KAG7016815.1	5.51e-55	92.63	hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_031742148.1	1.37e-53	93.62	uncharacterized protein LOC101207351 isoform X2 [Cucumis sativus]	[more]

BLAST of MC06g1370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AU63	1.50e-56	94.68	uncharacterized protein LOC103482984 OS=Cucumis melo OX=3656 GN=LOC103482984 PE=...	[more]
A0A6J1C970	3.09e-56	100.00	uncharacterized protein LOC111009130 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A0A0KLU3	6.80e-53	97.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139175 PE=4 SV=1	[more]
A0A6J1E5Z9	6.53e-51	94.25	uncharacterized protein LOC111430272 OS=Cucurbita moschata OX=3662 GN=LOC1114302...	[more]
A0A6J1ID63	2.66e-50	91.95	uncharacterized protein LOC111471501 OS=Cucurbita maxima OX=3661 GN=LOC111471501...	[more]

BLAST of MC06g1370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10810.1	1.9e-13	58.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G24026.1	1.8e-11	56.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34061	PROTEIN, PUTATIVE-RELATED	coord: 16..84
None	No IPR available	PANTHER	PTHR34061:SF19	OS10G0502100 PROTEIN	coord: 16..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1370.1	MC06g1370.1	mRNA