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MC06g1350 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACCAGTGAACTCGCTTGCACCTACGCTGCGTTGATTCTTCACGACGACGCCATCTCCGTCACTGTATATTCTCCTTGATCTCTGTTTCTAATTATTTTGTATTGTTTCTCCGATTTGATTTCCAAGTACTCGATCTGTTTTTAATTTGTTCGATTTTAGGCGGAGAAGATTGCGACATTGGTTAAGGCTGCTGGCCTGACCGTGGAATCATACTGGCCCTCTCTGTTCGCTAAGTTGTCGTCAAAAAGGAACATCGACGATCTCATTCTCAACGTCGGATCTGCTGCTGCTTCTGCTCCTCTGTCCATGGCATCTTCCAGTTCCGCCGATGCCTCTGCCGCTCCCGCTCCTGCTCCTGCGCCCGTCGAGAAGAAGGTACCGAGTTTTAATTTCGTTTGGCAATTGCGATTGTTGATTTATAGATGATCAGTTCAAAATCAATTCTAAAACCGAGAATCGCGGCAATTAGGATTGTTGATTTATAGACGATCAGTTCAAAATCAATTCTAAAACCGAGATCTGAGGCATAGTCTTGATTTGATTGTTTGTGTTTGTATGTACAGGAAGAGGCAGTGGAAGAGAGCGAGGATGATTTGGTCTTCGGCTTGTTCGATTAGATATATAATATACACGTTAGTTTCTTAATTTTCAAGCTTGATTTAGATAATTGGGAGATTTTTGTTTTGTTCTTAAAATTCGATTACTGTGGACTTGGATTTTGTCGTCAATGGCGAGATGAATTCTTCTTCTTCTTCGATGGTATGTTTCTGAATGACATGGAAATTAGAATATATATTACTGTGTAATGTGAAC ATGTCGACCAGTGAACTCGCTTGCACCTACGCTGCGTTGATTCTTCACGACGACGCCATCTCCGTCACTGCGGAGAAGATTGCGACATTGGTTAAGGCTGCTGGCCTGACCGTGGAATCATACTGGCCCTCTCTGTTCGCTAAGTTGTCGTCAAAAAGGAACATCGACGATCTCATTCTCAACGTCGGATCTGCTGCTGCTTCTGCTCCTCTGTCCATGGCATCTTCCAGTTCCGCCGATGCCTCTGCCGCTCCCGCTCCTGCTCCTGCGCCCGTCGAGAAGAAGGAAGAGGCAGTGGAAGAGAGCGAGGATGATTTGGTCTTCGGCTTGTTCGATTAGATATATAATATACACGTTAGTTTCTTAATTTTCAAGCTTGATTTAGATAATTGGGAGATTTTTGTTTTGTTCTTAAAATTCGATTACTGTGGACTTGGATTTTGTCGTCAATGGCGAGATGAATTCTTCTTCTTCTTCGATGGTATGTTTCTGAATGACATGGAAATTAGAATATATATTACTGTGTAATGTGAAC ATGTCGACCAGTGAACTCGCTTGCACCTACGCTGCGTTGATTCTTCACGACGACGCCATCTCCGTCACTGCGGAGAAGATTGCGACATTGGTTAAGGCTGCTGGCCTGACCGTGGAATCATACTGGCCCTCTCTGTTCGCTAAGTTGTCGTCAAAAAGGAACATCGACGATCTCATTCTCAACGTCGGATCTGCTGCTGCTTCTGCTCCTCTGTCCATGGCATCTTCCAGTTCCGCCGATGCCTCTGCCGCTCCCGCTCCTGCTCCTGCGCCCGTCGAGAAGAAGGAAGAGGCAGTGGAAGAGAGCGAGGATGATTTGGTCTTCGGCTTGTTCGATTAG MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKEEAVEESEDDLVFGLFD Homology
BLAST of MC06g1350 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 8.1e-28 Identity = 70/112 (62.50%), Postives = 88/112 (78.57%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2) HSP 1 Score: 114.4 bits (285), Expect = 8.4e-25 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2) HSP 1 Score: 113.6 bits (283), Expect = 1.4e-24 Identity = 66/114 (57.89%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 1.2e-23 Identity = 64/113 (56.64%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 7.9e-23 Identity = 65/113 (57.52%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of MC06g1350 vs. NCBI nr
Match: XP_022138164.1 (60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia]) HSP 1 Score: 198 bits (504), Expect = 1.41e-63 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of MC06g1350 vs. NCBI nr
Match: XP_022138163.1 (60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia]) HSP 1 Score: 191 bits (486), Expect = 1.93e-60 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MC06g1350 vs. NCBI nr
Match: MBA0801017.1 (hypothetical protein [Gossypium harknessii]) HSP 1 Score: 136 bits (342), Expect = 6.88e-39 Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of MC06g1350 vs. NCBI nr
Match: XP_016670842.1 (60S acidic ribosomal protein P1 [Gossypium hirsutum] >XP_016717235.1 60S acidic ribosomal protein P1-like [Gossypium hirsutum] >KAB1669783.1 hypothetical protein ES319_1Z011100v1 [Gossypium barbadense] >MBA0684678.1 hypothetical protein [Gossypium aridum] >TYG54798.1 hypothetical protein ES288_D09G219900v1 [Gossypium darwinii] >TYI11565.1 hypothetical protein ES332_A09G215300v1 [Gossypium tomentosum] >TYJ19550.1 hypothetical protein E1A91_A09G198400v1 [Gossypium mustelinum]) HSP 1 Score: 134 bits (338), Expect = 2.80e-38 Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 0
BLAST of MC06g1350 vs. NCBI nr
Match: KAG9158055.1 (hypothetical protein Leryth_000214 [Lithospermum erythrorhizon]) HSP 1 Score: 134 bits (337), Expect = 3.74e-38 Identity = 76/112 (67.86%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy TrEMBL
Match: A0A6J1C9A3 (60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1) HSP 1 Score: 198 bits (504), Expect = 6.82e-64 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy TrEMBL
Match: A0A6J1CC92 (60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1) HSP 1 Score: 191 bits (486), Expect = 9.35e-61 Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy TrEMBL
Match: A0A7J9GTV1 (Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_011410 PE=3 SV=1) HSP 1 Score: 136 bits (342), Expect = 3.33e-39 Identity = 77/112 (68.75%), Postives = 90/112 (80.36%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy TrEMBL
Match: A0A1U8HXU8 (60S acidic ribosomal protein P1-like OS=Gossypium hirsutum OX=3635 GN=LOC107890794 PE=3 SV=1) HSP 1 Score: 134 bits (338), Expect = 1.35e-38 Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 0
BLAST of MC06g1350 vs. ExPASy TrEMBL
Match: A0A5D2P7Z1 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A09G215300v1 PE=3 SV=1) HSP 1 Score: 134 bits (338), Expect = 1.35e-38 Identity = 76/112 (67.86%), Postives = 89/112 (79.46%), Query Frame = 0
BLAST of MC06g1350 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family ) HSP 1 Score: 114.4 bits (285), Expect = 6.0e-26 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of MC06g1350 vs. TAIR 10
Match: AT4G00810.2 (60S acidic ribosomal protein family ) HSP 1 Score: 114.4 bits (285), Expect = 6.0e-26 Identity = 63/113 (55.75%), Postives = 84/113 (74.34%), Query Frame = 0
BLAST of MC06g1350 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family ) HSP 1 Score: 113.6 bits (283), Expect = 1.0e-25 Identity = 66/114 (57.89%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of MC06g1350 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family ) HSP 1 Score: 113.6 bits (283), Expect = 1.0e-25 Identity = 66/114 (57.89%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of MC06g1350 vs. TAIR 10
Match: AT5G24510.1 (60S acidic ribosomal protein family ) HSP 1 Score: 110.9 bits (276), Expect = 6.6e-25 Identity = 67/115 (58.26%), Postives = 77/115 (66.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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