MC06g1243 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g1243
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Superoxide dismutase [Cu-Zn]
Location	MC06: 17948418 .. 17951580 (+)
RNA-Seq Expression	MC06g1243
Synteny	MC06g1243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGACCACCATCCTGATTCCAAAAGCGCTGCTACTCTGATTATGAAACTACCATATTACCCCTAAAGACGAATAGGCAGGTGAAGAAGCAGAGAGACACGTCCCTCCACTATATAAATCTGTAAAAACCATTAGGTCTCCATATTTCTAGATTCTTCCACAAATTCAATCTCTCCTGCACTCTCTTTCAGCTCTCCAAGGGGTGTTCTGAGGTGATATCTCCATTTTCCTCTCTTAGATCCATCGCTTTTTCCTGTATTAGCTCTTTGTTTTGATCTCTTGCCCCTAATTCTTCTCAGTTTTAGCTTAATTTAGTTGTTACCTCAACGATCGGTGTAGTTTTGTCCCGAATTTCGAAATGATGGGATTCGAGTGCTTGTAATATCAGTATGATTTTGTACTCTTTGATGCTCGAGATTGTGTTTGTTGTTTTGTATCGAAATGGATATCGTTGACTGTTGTATTCTTTTATCGTTGTACCGATTTTTGTGAACTTGTTTGGTGATTTTCAATGTTTATGGAACTTCGGAGCTGCTTCTTTACCTGATTCGTGACAGTATGAAACATGCGGGCATCAATTATTGAGTTAATTTTTAAGTCCCTGACGGCATGTTGAATGAATAATGGTCTGTTTGGTACCTCTATATTTTGAGCGAGACGGGTTTCATGAATTCCCTTGCTTGTTATCCCATGAATTAGAATGGTATCTTGTTTTCAATGGGATTTGACAAGATTTCGTAGAATTTCAAAGTAAATTATTTATTTAACTTCTCATATGTTAGTTTTTAATTAATACATTTAGATTAAATTCCTAAATCAGTAAACTTTTTATATTTTTTCTGGCAAACATCCAAACAAAGAAAGTTACTTATATTCATTTAAAACCATTCTCATTCCGGACAAGACAAAGAATTGGAATAAATTCAATTAAAACCATTCTAATTCCAAACAAGATCAAGAATTTAAAAACATTTCTCGAATTACAGATCACAGTATTTAAAATCATTTCTTGGACTTTTTTTTTTTATGCCAAACAGAGTGTAAATGTTTCTCTTAAGCTCCATATTCTTTCATTGATTTAGTGTTTTTGTTATGTCACCTTGTCTAATCTTGTTTAAGGGTGTTAGATCACAGAAAACATGGTGAAGGCTGTGGCTGTTCTTGGTGCTAGCGACGTTGTCAGTGGAACTATCTTTTTTTCCCAAGAAGGAGATGGTAATTTGGTGATGGGTTTCATCTCTACGACTTATATTGCTATTTCTTCTTTCTTGTACTTGATCCGAAATGTTTCAGGTCCAACTACTGTGACGGGTAATGTTTCTGGTCTCAAGGCTGGGCTTCACGGTTTCCATGTTCATGCCCTCGGTGACACAACCAACGGCTGCATGTCAACTGGTATTGTTGGACACATATACAATTTTTTATTTATGTTACCTCTCTATTTTGAATTATGTGGATTCTTCTGAACTATTAAATATAGATACCTTCCTTTATCTGCATTAAATCTTCTAAATGTATTTGTAGGGCCACATTTCAACCCTGCTGGAAAACAGCATGGTGCTCCTGAGGATGAGAATCGCCATGCTGGTGATTTAGGGAACATTACTGTTGGTGAAGATGGTATGTTTCATTCTTTTTTCATAAAATAAATATAAATCTTGCTGGGTTATTCTATTGCCTCTTTTACAACATTTATGTTATATTTGTTTAGGTTATTTTTGTAAGAGTGTGATCTTGTCTGAGATTTCCTTTGAGAAATATATACCTATTTTGATGTTGGATCTGAGTATTGCGTCCTATGATATAGTTGTTGGATGCTCAGTAACTGCTAACACTTTGAATTTGACTGAATTCTACAGGCAAAGCTAGCTTCACGATTACTGACTGTCAGGTTTTTTCGACTGCCCCTGTTTAATTATTCTGTCATTTTTGTATTGCCAGAGGCACCCAATAGTATGGATCTTCCTCCATGTTCTAAGCTTTAGAAATTCATGCAGATTCCTCTCTCTGGACCTAACTCCATTATCGGAAGAGCTGTTGTGGTCCATGCTGACCCTGATGATCTTGGCAAGGGTAATATCTCAAACCATTTGCTGCTCAAGAGTCCTTTTAAATCTTCTTGATAGTATTTGGTCTATATCTGACATATCCCAACCCAAAAGAAACTTATTATCAATTGGCTTAAGGCTGCACCATAGGCAAGTGTTTGGTTCAGGGGAAAATTTTTTAGTAATATTATCCCATGTTTCTTTTCTTTTTTCATTTGAATATTTAGAATGGCAGCAGGGTTCATAAACATGCATGTAGATTATAATACAGCCGATACAGAAAATTGATAGTATGGAGGTGATGAGAACCGACTTTAAGATAGCAGTAAGAAGAATATTGGCTTAAAGTTGTATTGAGATTATATTCCCTTTAATATATACTTACGTTAGTGGTTCATATTATTCAACTTTTTTGGAGTAATTGGGTAGTCTATCCTCCCAAACTTCTGATTTTTGGCATTTCCAACTTTTTAGTCGGTCTTTAGTCCTTACCGCTAAACTTTAACCCAAAAGCTTAAGGTGATAGGTTATTTAAACTTTTGTACATATTCTTAAAATTCTCCACTTTTGGGCTTGGAAATTAGCATAAAACTCTATAAGTGATTATCAAATATTAATTTGGGTAGGGTTCAAACTCAAGTTCCTAGTCTTTGATAGATAGTATATTTAAGCTAACTTTGGGAGGTTTTCCGCTCAAAATTTTCATGTTTGGAAGTGATTCAAAGTAGTGGTTCACATAAAAGTGAAAAACATCTTAAAAGTGATTTGTGAGAAAGAATTTCTAGAGTGCTTTTAGTTGAGTGGATGATTGGGAAGCACTCAAAAGCAGTTTTAGGAGTGTAGGAGCAAACATCAACCTTATTTATTTGAGTATAGCTCTAATTGGTTGAGGCATATATCTCGAACAAAAAGTCGTGGGCTCCACTCAAATACTCAAAAAAATATTATTAAGCATTTTCTTACTGGAGTACTTTTTCTAAAGCACCTAAAAGCATTTGCAAACACACCTTTTCATACATATTATTAACAGTTGCTCTATTCTTGATATCCAGGTGGGCATGAACTCAGCTTGACCACTGGAAACGCTGGTGGCAGAGTAGCCTGTGGTAAGCAAATC

mRNA sequence

TGACCACCATCCTGATTCCAAAAGCGCTGCTACTCTGATTATGAAACTACCATATTACCCCTAAAGACGAATAGGCAGGTGAAGAAGCAGAGAGACACGTCCCTCCACTATATAAATCTGTAAAAACCATTAGGTCTCCATATTTCTAGATTCTTCCACAAATTCAATCTCTCCTGCACTCTCTTTCAGCTCTCCAAGGGGTGTTCTGAGATCACAGAAAACATGGTGAAGGCTGTGGCTGTTCTTGGTGCTAGCGACGTTGTCAGTGGAACTATCTTTTTTTCCCAAGAAGGAGATGGTCCAACTACTGTGACGGGTAATGTTTCTGGTCTCAAGGCTGGGCTTCACGGTTTCCATGTTCATGCCCTCGGTGACACAACCAACGGCTGCATGTCAACTGGGCCACATTTCAACCCTGCTGGAAAACAGCATGGTGCTCCTGAGGATGAGAATCGCCATGCTGGTGATTTAGGGAACATTACTGTTGGTGAAGATGGCAAAGCTAGCTTCACGATTACTGACTGTCAGATTCCTCTCTCTGGACCTAACTCCATTATCGGAAGAGCTGTTGTGGTCCATGCTGACCCTGATGATCTTGGCAAGGGTGGGCATGAACTCAGCTTGACCACTGGAAACGCTGGTGGCAGAGTAGCCTGTGGTAAGCAAATC

Coding sequence (CDS)

ATGGTGAAGGCTGTGGCTGTTCTTGGTGCTAGCGACGTTGTCAGTGGAACTATCTTTTTTTCCCAAGAAGGAGATGGTCCAACTACTGTGACGGGTAATGTTTCTGGTCTCAAGGCTGGGCTTCACGGTTTCCATGTTCATGCCCTCGGTGACACAACCAACGGCTGCATGTCAACTGGGCCACATTTCAACCCTGCTGGAAAACAGCATGGTGCTCCTGAGGATGAGAATCGCCATGCTGGTGATTTAGGGAACATTACTGTTGGTGAAGATGGCAAAGCTAGCTTCACGATTACTGACTGTCAGATTCCTCTCTCTGGACCTAACTCCATTATCGGAAGAGCTGTTGTGGTCCATGCTGACCCTGATGATCTTGGCAAGGGTGGGCATGAACTCAGCTTGACCACTGGAAACGCTGGTGGCAGAGTAGCCTGTGGTAAGCAAATC

Protein sequence

MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTGPHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSLTTGNAGGRVACGKQI

Homology

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BLAST of MC06g1243 vs. ExPASy Swiss-Prot
Match: Q07796 (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 3.5e-71
Identity = 130/146 (89.04%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVL +S+ VSGTIFFSQEGDGPTTVTGNVSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGK+HGAP D+NRHAGDLGNITVGEDG ASFTITD QIPL+G NS+IGRAVVVH 
Sbjct: 61  PHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHG 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 147
           DPDDLGKGGHELS +TGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. ExPASy Swiss-Prot
Match: O22373 (Superoxide dismutase [Cu-Zn] OS=Capsicum annuum OX=4072 GN=SODCC PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 7.9e-71
Identity = 129/146 (88.36%), Postives = 136/146 (93.15%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVL +S+ VSGTI FSQ+GD PTTVTGNVSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MVKAVAVLSSSECVSGTILFSQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PH+NPAGK+HGAPEDENRHAGDLGNITVGEDG ASFTITD QIPL+GP SIIGR VVVHA
Sbjct: 61  PHYNPAGKEHGAPEDENRHAGDLGNITVGEDGTASFTITDEQIPLTGPQSIIGRGVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 147
           DPDDLGKGGHEL+ TTGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELTKTTGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. ExPASy Swiss-Prot
Match: P27082 (Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 SV=2)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-70
Identity = 129/146 (88.36%), Postives = 137/146 (93.84%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVL +S+ VSGTIFF+Q+GD PTTVTGNVSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MVKAVAVLSSSEGVSGTIFFTQDGDAPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PH+NPAGK+HGAPEDE RHAGDLGNITVGEDG ASFT+TD QIPL+GP SIIGRAVVVHA
Sbjct: 61  PHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTLTDKQIPLAGPQSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 147
           DPDDLGKGGHELS TTGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSKTTGNAGGRVACG 146

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BLAST of MC06g1243 vs. ExPASy Swiss-Prot
Match: P24704 (Superoxide dismutase [Cu-Zn] 1 OS=Arabidopsis thaliana OX=3702 GN=CSD1 PE=1 SV=2)

HSP 1 Score: 263.1 bits (671), Expect = 1.9e-69
Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           M K VAVL +S+ V+GTIFF+QEGDG TTV+G VSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNP GK HGAPED NRHAGDLGNITVG+DG A+FTITDCQIPL+GPNSI+GRAVVVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 147
           DPDDLGKGGHELSL TGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. ExPASy Swiss-Prot
Match: P23345 (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays OX=4577 GN=SODCC.3 PE=2 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 3.3e-69
Identity = 124/146 (84.93%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLG+S+ V GTIFF+QEGDGPTTVTG+VSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PH+NPA K+HGAPEDENRHAGDLGN+T G DG A+  +TD QIPL+GPNSIIGRAVVVHA
Sbjct: 61  PHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 147
           DPDDLGKGGHELS +TGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSKSTGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. NCBI nr
Match: XP_022158885.1 (superoxide dismutase [Cu-Zn] [Momordica charantia] >XP_022158886.1 superoxide dismutase [Cu-Zn] [Momordica charantia] >XP_022158887.1 superoxide dismutase [Cu-Zn] [Momordica charantia])

HSP 1 Score: 299 bits (766), Expect = 2.68e-102
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSLTTGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. NCBI nr
Match: AKN08991.1 (superoxide dismutase [Luffa aegyptiaca])

HSP 1 Score: 287 bits (735), Expect = 1.43e-97
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVK VAVLG+S+ VSGTIFFSQEGDGPTTVTGNVSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MVKGVAVLGSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTI+DCQIPLSGPNSIIGRAVVVH 
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTISDCQIPLSGPNSIIGRAVVVHG 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSLTTGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. NCBI nr
Match: XP_023545334.1 (superoxide dismutase [Cu-Zn] [Cucurbita pepo subsp. pepo] >XP_023545336.1 superoxide dismutase [Cu-Zn] [Cucurbita pepo subsp. pepo] >XP_023545337.1 superoxide dismutase [Cu-Zn] [Cucurbita pepo subsp. pepo] >AWW05328.1 superoxide dismutase [Cu-Zn] 2 [Cucurbita pepo])

HSP 1 Score: 280 bits (716), Expect = 1.13e-94
Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLG S+ V GTIFFSQEGDGPTTVTG+VSGLKAGLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVIGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITD QIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSL+TGNAG RVACG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACG 146

[Close]

BLAST of MC06g1243 vs. NCBI nr
Match: XP_022961402.1 (superoxide dismutase [Cu-Zn] isoform X1 [Cucurbita moschata] >XP_022961403.1 superoxide dismutase [Cu-Zn] isoform X1 [Cucurbita moschata] >XP_022961404.1 superoxide dismutase [Cu-Zn] isoform X1 [Cucurbita moschata] >XP_022968807.1 superoxide dismutase [Cu-Zn] [Cucurbita maxima] >XP_022968808.1 superoxide dismutase [Cu-Zn] [Cucurbita maxima] >XP_022968809.1 superoxide dismutase [Cu-Zn] [Cucurbita maxima] >KAG7023960.1 Superoxide dismutase [Cu-Zn] [Cucurbita argyrosperma subsp. argyrosperma] >AHF27437.1 superoxide dismutase [Cucurbita maxima])

HSP 1 Score: 280 bits (716), Expect = 1.13e-94
Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLG S+ V GTIFFSQEGDGPTTVTG+VSGLKAGLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITD QIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSL+TGNAG RVACG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACG 146

[Close]

BLAST of MC06g1243 vs. NCBI nr
Match: KAG6590411.1 (Superoxide dismutase [Cu-Zn]-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280 bits (716), Expect = 3.38e-94
Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLG S+ V GTIFFSQEGDGPTTVTG+VSGLKAGLHGFHVHA+GDTTNGCMSTG
Sbjct: 33  MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 92

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITD QIPLSGPNSIIGRAVVVHA
Sbjct: 93  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 152

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSL+TGNAG RVACG
Sbjct: 153 DPDDLGKGGHELSLSTGNAGARVACG 178

[Close]

BLAST of MC06g1243 vs. ExPASy TrEMBL
Match: A0A6J1DX40 (Superoxide dismutase [Cu-Zn] OS=Momordica charantia OX=3673 GN=LOC111025346 PE=3 SV=1)

HSP 1 Score: 299 bits (766), Expect = 1.30e-102
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSLTTGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. ExPASy TrEMBL
Match: A0A0U2DB27 (Superoxide dismutase [Cu-Zn] OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 287 bits (735), Expect = 6.93e-98
Identity = 139/146 (95.21%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVK VAVLG+S+ VSGTIFFSQEGDGPTTVTGNVSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MVKGVAVLGSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTI+DCQIPLSGPNSIIGRAVVVH 
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTISDCQIPLSGPNSIIGRAVVVHG 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSLTTGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. ExPASy TrEMBL
Match: W0FVL0 (Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=Cu PE=2 SV=1)

HSP 1 Score: 280 bits (716), Expect = 5.47e-95
Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLG S+ V GTIFFSQEGDGPTTVTG+VSGLKAGLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITD QIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSL+TGNAG RVACG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACG 146

[Close]

BLAST of MC06g1243 vs. ExPASy TrEMBL
Match: A0A6J1HA41 (Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111461986 PE=3 SV=1)

HSP 1 Score: 280 bits (716), Expect = 5.47e-95
Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLG S+ V GTIFFSQEGDGPTTVTG+VSGLKAGLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVVGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITD QIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSL+TGNAG RVACG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACG 146

[Close]

BLAST of MC06g1243 vs. ExPASy TrEMBL
Match: A0A2Z4GT65 (Superoxide dismutase [Cu-Zn] OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 280 bits (716), Expect = 5.47e-95
Identity = 137/146 (93.84%), Postives = 141/146 (96.58%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           MVKAVAVLG S+ V GTIFFSQEGDGPTTVTG+VSGLKAGLHGFHVHA+GDTTNGCMSTG
Sbjct: 1   MVKAVAVLGNSECVIGTIFFSQEGDGPTTVTGDVSGLKAGLHGFHVHAMGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITD QIPLSGPNSIIGRAVVVHA
Sbjct: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDNQIPLSGPNSIIGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 146
           DPDDLGKGGHELSL+TGNAG RVACG
Sbjct: 121 DPDDLGKGGHELSLSTGNAGARVACG 146

[Close]

BLAST of MC06g1243 vs. TAIR 10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-70
Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           M K VAVL +S+ V+GTIFF+QEGDG TTV+G VSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNP GK HGAPED NRHAGDLGNITVG+DG A+FTITDCQIPL+GPNSI+GRAVVVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 147
           DPDDLGKGGHELSL TGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. TAIR 10
Match: AT1G08830.2 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-70
Identity = 125/146 (85.62%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MVKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTG 60
           M K VAVL +S+ V+GTIFF+QEGDG TTV+G VSGLK GLHGFHVHALGDTTNGCMSTG
Sbjct: 1   MAKGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTG 60

Query: 61  PHFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHA 120
           PHFNP GK HGAPED NRHAGDLGNITVG+DG A+FTITDCQIPL+GPNSI+GRAVVVHA
Sbjct: 61  PHFNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHA 120

Query: 121 DPDDLGKGGHELSLTTGNAGGRVACG 147
           DPDDLGKGGHELSL TGNAGGRVACG
Sbjct: 121 DPDDLGKGGHELSLATGNAGGRVACG 146

[Close]

BLAST of MC06g1243 vs. TAIR 10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2 )

HSP 1 Score: 199.1 bits (505), Expect = 2.4e-51
Identity = 96/144 (66.67%), Postives = 108/144 (75.00%), Query Frame = 0


Query: 3   KAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTGPH 62
           KAVAVL  +  V G +  +Q+  GPTTV   ++GL  G HGFH+H  GDTTNGC+STGPH
Sbjct: 66  KAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTNGCISTGPH 125

Query: 63  FNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHADP 122
           FNP    HGAPEDE RHAGDLGNI    DG A  TI D QIPL+GPNS++GRA VVH   
Sbjct: 126 FNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELK 185

Query: 123 DDLGKGGHELSLTTGNAGGRVACG 147
           DDLGKGGHELSLTTGNAGGR+ACG
Sbjct: 186 DDLGKGGHELSLTTGNAGGRLACG 209

[Close]

BLAST of MC06g1243 vs. TAIR 10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-48
Identity = 90/145 (62.07%), Postives = 107/145 (73.79%), Query Frame = 0


Query: 2   VKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTGP 61
           ++AVA++   + V G + F Q+  G T VTG +SGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHAD 121
           HFNP  + HG P +E RHAGDLGNI  G +G A   I D  IPLSG  SI+GRAVVVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 122 PDDLGKGGHELSLTTGNAGGRVACG 147
           PDDLGKGGH+LS +TGNAG RV CG
Sbjct: 128 PDDLGKGGHKLSKSTGNAGSRVGCG 152

[Close]

BLAST of MC06g1243 vs. TAIR 10
Match: AT5G18100.2 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-40
Identity = 77/127 (60.63%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 2   VKAVAVLGASDVVSGTIFFSQEGDGPTTVTGNVSGLKAGLHGFHVHALGDTTNGCMSTGP 61
           ++AVA++   + V G + F Q+  G T VTG +SGL  G HGFH+H+ GDTTNGC+STGP
Sbjct: 8   LRAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGP 67

Query: 62  HFNPAGKQHGAPEDENRHAGDLGNITVGEDGKASFTITDCQIPLSGPNSIIGRAVVVHAD 121
           HFNP  + HG P +E RHAGDLGNI  G +G A   I D  IPLSG  SI+GRAVVVHAD
Sbjct: 68  HFNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHAD 127

Query: 122 PDDLGKG 129
           PDDLGKG
Sbjct: 128 PDDLGKG 134

The following BLAST results are available for this feature:

BLAST of MC06g1243 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q07796	3.5e-71	89.04	Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas OX=4120 GN=SODCC PE=2 SV=2	[more]
O22373	7.9e-71	88.36	Superoxide dismutase [Cu-Zn] OS=Capsicum annuum OX=4072 GN=SODCC PE=2 SV=1	[more]
P27082	1.3e-70	88.36	Superoxide dismutase [Cu-Zn] OS=Nicotiana plumbaginifolia OX=4092 GN=SODCC PE=2 ...	[more]
P24704	1.9e-69	85.62	Superoxide dismutase [Cu-Zn] 1 OS=Arabidopsis thaliana OX=3702 GN=CSD1 PE=1 SV=2	[more]
P23345	3.3e-69	84.93	Superoxide dismutase [Cu-Zn] 4A OS=Zea mays OX=4577 GN=SODCC.3 PE=2 SV=2	[more]

BLAST of MC06g1243 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158885.1	2.68e-102	100.00	superoxide dismutase [Cu-Zn] [Momordica charantia] >XP_022158886.1 superoxide di...	[more]
AKN08991.1	1.43e-97	95.21	superoxide dismutase [Luffa aegyptiaca]	[more]
XP_023545334.1	1.13e-94	93.84	superoxide dismutase [Cu-Zn] [Cucurbita pepo subsp. pepo] >XP_023545336.1 supero...	[more]
XP_022961402.1	1.13e-94	93.84	superoxide dismutase [Cu-Zn] isoform X1 [Cucurbita moschata] >XP_022961403.1 sup...	[more]
KAG6590411.1	3.38e-94	93.84	Superoxide dismutase [Cu-Zn]-like protein, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of MC06g1243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX40	1.30e-102	100.00	Superoxide dismutase [Cu-Zn] OS=Momordica charantia OX=3673 GN=LOC111025346 PE=3...	[more]
A0A0U2DB27	6.93e-98	95.21	Superoxide dismutase [Cu-Zn] OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
W0FVL0	5.47e-95	93.84	Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=Cu PE=2 SV=1	[more]
A0A6J1HA41	5.47e-95	93.84	Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111461986 PE=3 ...	[more]
A0A2Z4GT65	5.47e-95	93.84	Superoxide dismutase [Cu-Zn] OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]

BLAST of MC06g1243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08830.1	1.4e-70	85.62	copper/zinc superoxide dismutase 1	[more]
AT1G08830.2	1.4e-70	85.62	copper/zinc superoxide dismutase 1	[more]
AT2G28190.1	2.4e-51	66.67	copper/zinc superoxide dismutase 2	[more]
AT5G18100.1	1.1e-48	62.07	copper/zinc superoxide dismutase 3	[more]
AT5G18100.2	1.9e-40	60.63	copper/zinc superoxide dismutase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001424	Superoxide dismutase, copper/zinc binding domain	PRINTS	PR00068	CUZNDISMTASE	coord: 98..120 score: 66.29 coord: 43..65 score: 80.46 coord: 79..88 score: 75.15 coord: 123..149 score: 69.3
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 13..146 e-value: 1.6E-47 score: 161.2
IPR001424	Superoxide dismutase, copper/zinc binding domain	CDD	cd00305	Cu-Zn_Superoxide_Dismutase	coord: 2..145 e-value: 7.80286E-62 score: 185.157
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	GENE3D	2.60.40.200	Superoxide dismutase, copper/zinc binding domain	coord: 1..148 e-value: 8.8E-65 score: 219.5
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	SUPERFAMILY	49329	Cu,Zn superoxide dismutase-like	coord: 2..146
None	No IPR available	PANTHER	PTHR10003:SF79	SUPEROXIDE DISMUTASE [CU-ZN] 1	coord: 1..146
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 1..146
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00087	SOD_CU_ZN_1	coord: 43..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g1243.1	MC06g1243.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071280	cellular response to copper ion
biological_process	GO:0071484	cellular response to light intensity
biological_process	GO:0071457	cellular response to ozone
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0071329	cellular response to sucrose stimulus
biological_process	GO:0071493	cellular response to UV-B
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0035195	gene silencing by miRNA
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0010039	response to iron ion
biological_process	GO:0006801	superoxide metabolic process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0046872	metal ion binding