MC06g1139 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1139
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionTransposase_23 domain-containing protein
LocationMC06: 12681957 .. 12682473 (-)
RNA-Seq ExpressionMC06g1139
SyntenyMC06g1139
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGTTGTTTACGGTGTATCTCTGACAGAGAATGATGTTCGTGTAGTGATTAACATCATATTTGATGGTAGTGATCCATTGCCAATACCTGTAGCAGGGAATATTGAGACGATCAATGATGCCATTGGATTTCATGTTCAATGGCCCAAAAATCTTCTTGTCCTGTATAGAGAATAAAAAGTAAGTTTATTTTTAATATTTTGTTATTTTCTATTATATATGTGTGTGGTTTTTATTTATTTATTTAAATATTTGTTAGGTAGGAACGTAGGAAAGCTTTCAAGAGTTAGCTGCACTAAAACGGGGGAGAAGTCGAAAGATGATTTGCAATCGATTCTAGTACCTATTAAATCTCTATTTAAGGTATGTAGAGAAAATAATGCAAACTAATTACTTGCACATCCCATTAGATGATCATATTTTTGGGTATTTATTTACCCTCAACATAACAAAAGAGACTATGAAACAGTTTTGTATGATGGACAAAGTAACCGCACCCATTATTATTGTATATATC

mRNA sequence

CAAGTTGTTTACGGTGTATCTCTGACAGAGAATGATGTTCGTGTAGTGATTAACATCATATTTGATGGTAGTGATCCATTGCCAATACCTGTAGCAGGGAATATTGAGACGATCAATGATGCCATTGGATTTCATGTTCAATGGCCCAAAAATCTTCTTGTCCTGTATAGAAAAAAGAACGTAGGAAAGCTTTCAAGAGTTAGCTGCACTAAAACGGGGGAGAAGTCGAAAGATGATTTGCAATCGATTCTAGTACCTATTAAATATTTAAGGTATGTAGAGAAAATAATGCAAACTAATTACTTGCACATCCCATTAGATGATCATATTTTTGGGTATTTATTTACCCTCAACATAACAAAAGAGACTATGAAACAGTTTTGTATGATGGACAAAGTAACCGCACCCATTATTATTGTATATATC

Coding sequence (CDS)

CAAGTTGTTTACGGTGTATCTCTGACAGAGAATGATGTTCGTGTAGTGATTAACATCATATTTGATGGTAGTGATCCATTGCCAATACCTGTAGCAGGGAATATTGAGACGATCAATGATGCCATTGGATTTCATGTTCAATGGCCCAAAAATCTTCTTGTCCTGTATAGAAAAAAGAACGTAGGAAAGCTTTCAAGAGTTAGCTGCACTAAAACGGGGGAGAAGTCGAAAGATGATTTGCAATCGATTCTAGTACCTATTAAATATTTAAGGTATGTAGAGAAAATAATGCAAACTAATTACTTGCACATCCCATTAGATGATCATATTTTTGGGTATTTATTTACCCTCAACATAACAAAAGAGACTATGAAACAGTTTTGTATGATGGACAAAGTAACCGCACCCATTATTATTGTATATATC

Protein sequence

QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLYRKKNVGKLSRVSCTKTGEKSKDDLQSILVPIKYLRYVEKIMQTNYLHIPLDDHIFGYLFTLNITKETMKQFCMMDKVTAPIIIVYI
Homology
BLAST of MC06g1139 vs. NCBI nr
Match: KAA0034021.1 (uncharacterized protein E6C27_scaffold65G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (267), Expect = 1.20e-25
Identity = 60/144 (41.67%), Postives = 91/144 (63.19%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLYRKKN 60
           ++VYGV L E DV V+I +  D    LPIP+ G+I +++DAIG HV WPK L+V+  +K 
Sbjct: 89  EIVYGVRLGEGDVLVLIELACDSHSLLPIPIVGSIYSVHDAIGLHVPWPKYLIVIEEQKK 148

Query: 61  VGKLSRVSC---TKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLD-DHIFGYLF 120
               S+ SC      G KSK +   +   I++ LR+VEK M+  YL IP+D + IFGY F
Sbjct: 149 TS--SKKSCELEALKGTKSKMNELKLPTTIRFVLRHVEKDMKDEYLTIPVDTEEIFGYSF 208

Query: 121 TLNITKETMKQFCMMDKVTAPIII 139
            +N+ K+++KQ C+M+ +   +I+
Sbjct: 209 NVNVMKDSIKQLCLMEGLAISVIL 230

BLAST of MC06g1139 vs. NCBI nr
Match: KAA0053273.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 107 bits (266), Expect = 8.05e-24
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLY-RKK 60
           ++VYGV L E DV V+I +  D    LPIP+  +I +I+DAIG HV WPK L+V+  +KK
Sbjct: 372 EIVYGVRLGEGDVGVLIELACDSHSLLPIPIVESIYSIHDAIGSHVPWPKYLIVIEEQKK 431

Query: 61  NVGKLSRVSCTKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLD-DHIFGYLFTL 120
              K S       G KSK +   +   I++ LR+VEK M+  YL IP+D   IFGY F +
Sbjct: 432 TSSKKSHELEALKGTKSKMNELKLPTTIRFVLRHVEKDMEDEYLTIPVDTQEIFGYSFNV 491

Query: 121 NITKETMKQFCMMDKVTAPIIIVY 141
           N+ K++MKQ C+M+++   +I+ Y
Sbjct: 492 NVMKDSMKQLCLMEELAFSVILSY 515

BLAST of MC06g1139 vs. NCBI nr
Match: TYK18876.1 (uncharacterized protein E5676_scaffold204G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 102 bits (253), Expect = 1.67e-22
Identity = 60/145 (41.38%), Postives = 87/145 (60.00%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLY-RKK 60
           ++VY V L E DV V I +  D    LPIP+ GNI +++DAIG HV W K L+V+  +KK
Sbjct: 134 EIVYRVRLGEGDVWVFIELACDSHSLLPIPIVGNIYSVHDAIGSHVSWQKYLIVIEEQKK 193

Query: 61  NVGKLSRVSCTKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLD-DHIFGYLFTL 120
              K  R      G K K +   +   I++ LR+VEK M   YL IP+D   IFGY F +
Sbjct: 194 TSSKKPRELEALKGTKLKMNELKLSTTIRFVLRHVEKDMNDEYLTIPVDTQEIFGYSFNV 253

Query: 121 NITKETMKQFCMMDKVTAPIIIVYI 142
           N+ K+++KQ C+M+++   +I+ YI
Sbjct: 254 NVMKDSIKQLCLMEELALSVILSYI 278

BLAST of MC06g1139 vs. NCBI nr
Match: KAA0045649.1 (uncharacterized protein E6C27_scaffold243G001620 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 1.51e-20
Identity = 57/144 (39.58%), Postives = 88/144 (61.11%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLYRKKN 60
           ++VYGV L E +V+V++ +  D    LPI + G+I +I+DAIG H+ WPK L+   +K  
Sbjct: 103 EIVYGVRLGEGNVQVLVELACDSHSLLPILIVGSIFSIHDAIGSHIPWPKYLITSSKK-- 162

Query: 61  VGKLSRVSCTKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLDD-HIFGYLFTLN 120
               SR S    G KSK +   +   I++ LR+VEK  +  YL IP+D   IFGY F +N
Sbjct: 163 ----SRESEALKGTKSKMNEFKLPTVIRFVLRHVEKDTKDEYLTIPVDTWEIFGYSFNVN 222

Query: 121 ITKETMKQFCMMDKVTAPIIIVYI 142
           + K+ +KQ C+M+++   +I+ YI
Sbjct: 223 VMKDGIKQLCLMEELALSMILSYI 240

BLAST of MC06g1139 vs. NCBI nr
Match: TYK02613.1 (uncharacterized protein E5676_scaffold280G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 96.3 bits (238), Expect = 1.53e-20
Identity = 57/144 (39.58%), Postives = 88/144 (61.11%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLYRKKN 60
           ++VYGV L E +V+V++ +  D    LPI + G+I +I+DAIG H+ WPK L+   +K  
Sbjct: 104 EIVYGVRLGEGNVQVLVELACDSHSLLPILIVGSIFSIHDAIGSHIPWPKYLITSSKK-- 163

Query: 61  VGKLSRVSCTKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLDD-HIFGYLFTLN 120
               SR S    G KSK +   +   I++ LR+VEK  +  YL IP+D   IFGY F +N
Sbjct: 164 ----SRESEALKGTKSKMNEFKLPTVIRFVLRHVEKDTKDEYLTIPVDTWEIFGYSFNVN 223

Query: 121 ITKETMKQFCMMDKVTAPIIIVYI 142
           + K+ +KQ C+M+++   +I+ YI
Sbjct: 224 VMKDGIKQLCLMEELALSMILSYI 241

BLAST of MC06g1139 vs. ExPASy TrEMBL
Match: A0A5A7SX35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00040 PE=4 SV=1)

HSP 1 Score: 107 bits (267), Expect = 5.83e-26
Identity = 60/144 (41.67%), Postives = 91/144 (63.19%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLYRKKN 60
           ++VYGV L E DV V+I +  D    LPIP+ G+I +++DAIG HV WPK L+V+  +K 
Sbjct: 89  EIVYGVRLGEGDVLVLIELACDSHSLLPIPIVGSIYSVHDAIGLHVPWPKYLIVIEEQKK 148

Query: 61  VGKLSRVSC---TKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLD-DHIFGYLF 120
               S+ SC      G KSK +   +   I++ LR+VEK M+  YL IP+D + IFGY F
Sbjct: 149 TS--SKKSCELEALKGTKSKMNELKLPTTIRFVLRHVEKDMKDEYLTIPVDTEEIFGYSF 208

Query: 121 TLNITKETMKQFCMMDKVTAPIII 139
            +N+ K+++KQ C+M+ +   +I+
Sbjct: 209 NVNVMKDSIKQLCLMEGLAISVIL 230

BLAST of MC06g1139 vs. ExPASy TrEMBL
Match: A0A5A7UBK9 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00720 PE=4 SV=1)

HSP 1 Score: 107 bits (266), Expect = 3.90e-24
Identity = 62/144 (43.06%), Postives = 90/144 (62.50%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLY-RKK 60
           ++VYGV L E DV V+I +  D    LPIP+  +I +I+DAIG HV WPK L+V+  +KK
Sbjct: 372 EIVYGVRLGEGDVGVLIELACDSHSLLPIPIVESIYSIHDAIGSHVPWPKYLIVIEEQKK 431

Query: 61  NVGKLSRVSCTKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLD-DHIFGYLFTL 120
              K S       G KSK +   +   I++ LR+VEK M+  YL IP+D   IFGY F +
Sbjct: 432 TSSKKSHELEALKGTKSKMNELKLPTTIRFVLRHVEKDMEDEYLTIPVDTQEIFGYSFNV 491

Query: 121 NITKETMKQFCMMDKVTAPIIIVY 141
           N+ K++MKQ C+M+++   +I+ Y
Sbjct: 492 NVMKDSMKQLCLMEELAFSVILSY 515

BLAST of MC06g1139 vs. ExPASy TrEMBL
Match: A0A5D3D5S7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00800 PE=4 SV=1)

HSP 1 Score: 102 bits (253), Expect = 8.11e-23
Identity = 60/145 (41.38%), Postives = 87/145 (60.00%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLY-RKK 60
           ++VY V L E DV V I +  D    LPIP+ GNI +++DAIG HV W K L+V+  +KK
Sbjct: 134 EIVYRVRLGEGDVWVFIELACDSHSLLPIPIVGNIYSVHDAIGSHVSWQKYLIVIEEQKK 193

Query: 61  NVGKLSRVSCTKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLD-DHIFGYLFTL 120
              K  R      G K K +   +   I++ LR+VEK M   YL IP+D   IFGY F +
Sbjct: 194 TSSKKPRELEALKGTKLKMNELKLSTTIRFVLRHVEKDMNDEYLTIPVDTQEIFGYSFNV 253

Query: 121 NITKETMKQFCMMDKVTAPIIIVYI 142
           N+ K+++KQ C+M+++   +I+ YI
Sbjct: 254 NVMKDSIKQLCLMEELALSVILSYI 278

BLAST of MC06g1139 vs. ExPASy TrEMBL
Match: A0A5A7TWM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001620 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.30e-21
Identity = 57/144 (39.58%), Postives = 88/144 (61.11%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLYRKKN 60
           ++VYGV L E +V+V++ +  D    LPI + G+I +I+DAIG H+ WPK L+   +K  
Sbjct: 103 EIVYGVRLGEGNVQVLVELACDSHSLLPILIVGSIFSIHDAIGSHIPWPKYLITSSKK-- 162

Query: 61  VGKLSRVSCTKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLDD-HIFGYLFTLN 120
               SR S    G KSK +   +   I++ LR+VEK  +  YL IP+D   IFGY F +N
Sbjct: 163 ----SRESEALKGTKSKMNEFKLPTVIRFVLRHVEKDTKDEYLTIPVDTWEIFGYSFNVN 222

Query: 121 ITKETMKQFCMMDKVTAPIIIVYI 142
           + K+ +KQ C+M+++   +I+ YI
Sbjct: 223 VMKDGIKQLCLMEELALSMILSYI 240

BLAST of MC06g1139 vs. ExPASy TrEMBL
Match: A0A5D3BSF6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00180 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.39e-21
Identity = 57/144 (39.58%), Postives = 88/144 (61.11%), Query Frame = 0

Query: 1   QVVYGVSLTENDVRVVINIIFDGSDPLPIPVAGNIETINDAIGFHVQWPKNLLVLYRKKN 60
           ++VYGV L E +V+V++ +  D    LPI + G+I +I+DAIG H+ WPK L+   +K  
Sbjct: 104 EIVYGVRLGEGNVQVLVELACDSHSLLPILIVGSIFSIHDAIGSHIPWPKYLITSSKK-- 163

Query: 61  VGKLSRVSCTKTGEKSKDDLQSILVPIKY-LRYVEKIMQTNYLHIPLDD-HIFGYLFTLN 120
               SR S    G KSK +   +   I++ LR+VEK  +  YL IP+D   IFGY F +N
Sbjct: 164 ----SRESEALKGTKSKMNEFKLPTVIRFVLRHVEKDTKDEYLTIPVDTWEIFGYSFNVN 223

Query: 121 ITKETMKQFCMMDKVTAPIIIVYI 142
           + K+ +KQ C+M+++   +I+ YI
Sbjct: 224 VMKDGIKQLCLMEELALSMILSYI 241

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0034021.11.20e-2541.67uncharacterized protein E6C27_scaffold65G00040 [Cucumis melo var. makuwa][more]
KAA0053273.18.05e-2443.06putative transposase [Cucumis melo var. makuwa][more]
TYK18876.11.67e-2241.38uncharacterized protein E5676_scaffold204G00800 [Cucumis melo var. makuwa][more]
KAA0045649.11.51e-2039.58uncharacterized protein E6C27_scaffold243G001620 [Cucumis melo var. makuwa][more]
TYK02613.11.53e-2039.58uncharacterized protein E5676_scaffold280G00180 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A5A7SX355.83e-2641.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UBK93.90e-2443.06Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102... [more]
A0A5D3D5S78.11e-2341.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TWM17.30e-2139.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BSF67.39e-2139.58Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1139.1MC06g1139.1mRNA