MC06g1114 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC06g1114
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein TIC 214
LocationMC06: 11872301 .. 11872411 (+)
RNA-Seq ExpressionMC06g1114
SyntenyMC06g1114
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTAAAACTAGGGTTAATAATTTTCAAATAATTGAAAAAATCGATAAGAAAGATTTTTTTTGTCTCACAATTAATCAAGATCAAGAAATCAACCCATCCAACAATAAAAAA

mRNA sequence

ACTAAAACTAGGGTTAATAATTTTCAAATAATTGAAAAAATCGATAAGAAAGATTTTTTTTGTCTCACAATTAATCAAGATCAAGAAATCAACCCATCCAACAATAAAAAA

Coding sequence (CDS)

ACTAAAACTAGGGTTAATAATTTTCAAATAATTGAAAAAATCGATAAGAAAGATTTTTTTTGTCTCACAATTAATCAAGATCAAGAAATCAACCCATCCAACAATAAAAAA

Protein sequence

TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK
Homology
[Close]
BLAST of MC06g1114 vs. ExPASy Swiss-Prot
Match: Q09WW0 (Protein TIC 214 OS=Morus indica OX=248361 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-05
Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNK 37
            TK R NN+QII+KID KD F  TI+Q+QE+NPS  K
Sbjct: 1441 TKPRANNYQIIDKIDNKDLFYPTIHQNQEMNPSKKK 1476

[Close]
BLAST of MC06g1114 vs. ExPASy Swiss-Prot
Match: Q3C1P6 (Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-05
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 38
            TK  +NN+QII+KIDKK FF LTI+Q+ E N  N+KK
Sbjct: 1472 TKIGINNYQIIDKIDKKGFFYLTIHQNPENNQKNSKK 1508

[Close]
BLAST of MC06g1114 vs. ExPASy Swiss-Prot
Match: P12222 (Protein TIC 214 OS=Nicotiana tabacum OX=4097 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-05
Identity = 23/37 (62.16%), Postives = 29/37 (78.38%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 38
            TK  +NN+QII+KIDKK FF LTI+Q+ E N  N+KK
Sbjct: 1472 TKIGINNYQIIDKIDKKGFFYLTIHQNPENNQKNSKK 1508

[Close]
BLAST of MC06g1114 vs. ExPASy Swiss-Prot
Match: Q8S8U2 (Protein TIC 214 OS=Atropa belladonna OX=33113 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 3.5e-04
Identity = 22/37 (59.46%), Postives = 27/37 (72.97%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 38
            TK  +NN+QIIEKIDKK  F LTI+Q+ E    N+KK
Sbjct: 1451 TKFGINNYQIIEKIDKKGLFYLTIHQNPENTQKNSKK 1487

[Close]
BLAST of MC06g1114 vs. ExPASy Swiss-Prot
Match: Q4VZL0 (Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 43.9 bits (102), Expect = 4.6e-04
Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 7    NFQIIEKIDKKDFFCLTINQDQEINPSNNKK 38
            N +II+KI KK+ F LTINQD++ NPSNNKK
Sbjct: 1477 NKKIIKKIKKKELFYLTINQDKKSNPSNNKK 1507

[Close]
BLAST of MC06g1114 vs. NCBI nr
Match: YP_009738261.1 (Ycf1 [Siraitia siamensis] >QIB71654.1 Ycf1 [Siraitia siamensis])

HSP 1 Score: 71.2 bits (173), Expect = 5.78e-13
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQIIEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1427 TKTGVNNFQIIEKIDKKDFFYLTINQDQEINPSNNKK 1463

[Close]
BLAST of MC06g1114 vs. NCBI nr
Match: QDL00004.1 (Ycf1 [Siraitia grosvenorii] >QIB71566.1 Ycf1 [Siraitia grosvenorii])

HSP 1 Score: 71.2 bits (173), Expect = 5.78e-13
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQIIEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1427 TKTGVNNFQIIEKIDKKDFFYLTINQDQEINPSNNKK 1463

[Close]
BLAST of MC06g1114 vs. NCBI nr
Match: YP_009752881.1 (Ycf1 protein [Baijiania yunnanensis] >QIT05953.1 Ycf1 protein [Baijiania yunnanensis])

HSP 1 Score: 71.2 bits (173), Expect = 5.78e-13
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQIIEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1428 TKTGVNNFQIIEKIDKKDFFYLTINQDQEINPSNNKK 1464

[Close]
BLAST of MC06g1114 vs. NCBI nr
Match: YP_009674449.1 (photosystem I assembly protein Ycf1 [Siraitia grosvenorii] >QDK59448.1 photosystem I assembly protein Ycf1 [Siraitia grosvenorii])

HSP 1 Score: 71.2 bits (173), Expect = 5.78e-13
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQIIEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1427 TKTGVNNFQIIEKIDKKDFFYLTINQDQEINPSNNKK 1463

[Close]
BLAST of MC06g1114 vs. NCBI nr
Match: YP_009753231.1 (Ycf1 protein [Trichosanthes truncata] >QIT06303.1 Ycf1 protein [Trichosanthes truncata])

HSP 1 Score: 70.5 bits (171), Expect = 1.08e-12
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQ+IEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1432 TKTGVNNFQLIEKIDKKDFFYLTINQDQEINPSNNKK 1468

[Close]
BLAST of MC06g1114 vs. ExPASy TrEMBL
Match: A0A515BLT2 (Protein TIC 214 OS=Siraitia grosvenorii OX=190515 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.80e-13
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQIIEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1427 TKTGVNNFQIIEKIDKKDFFYLTINQDQEINPSNNKK 1463

[Close]
BLAST of MC06g1114 vs. ExPASy TrEMBL
Match: A0A6C0U995 (Protein TIC 214 OS=Siraitia siamensis OX=2695833 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.80e-13
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQIIEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1427 TKTGVNNFQIIEKIDKKDFFYLTINQDQEINPSNNKK 1463

[Close]
BLAST of MC06g1114 vs. ExPASy TrEMBL
Match: A0A6H0EVE2 (Protein TIC 214 OS=Baijiania yunnanensis OX=381650 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.80e-13
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQIIEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1428 TKTGVNNFQIIEKIDKKDFFYLTINQDQEINPSNNKK 1464

[Close]
BLAST of MC06g1114 vs. ExPASy TrEMBL
Match: A0A514YKY6 (Protein TIC 214 OS=Siraitia grosvenorii OX=190515 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.80e-13
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQIIEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1427 TKTGVNNFQIIEKIDKKDFFYLTINQDQEINPSNNKK 1463

[Close]
BLAST of MC06g1114 vs. ExPASy TrEMBL
Match: A0A6H0EWE4 (Protein TIC 214 OS=Trichosanthes truncata OX=685060 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 5.23e-13
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 1    TKTRVNNFQIIEKIDKKDFFCLTINQDQEINPSNNKK 37
            TKT VNNFQ+IEKIDKKDFF LTINQDQEINPSNNKK
Sbjct: 1432 TKTGVNNFQLIEKIDKKDFFYLTINQDQEINPSNNKK 1468

The following BLAST results are available for this feature:
BLAST of MC06g1114 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q09WW01.1e-0563.89Protein TIC 214 OS=Morus indica OX=248361 GN=TIC214 PE=3 SV=1[more]
Q3C1P62.4e-0562.16Protein TIC 214 OS=Nicotiana sylvestris OX=4096 GN=TIC214 PE=3 SV=1[more]
P122222.4e-0562.16Protein TIC 214 OS=Nicotiana tabacum OX=4097 GN=TIC214 PE=3 SV=2[more]
Q8S8U23.5e-0459.46Protein TIC 214 OS=Atropa belladonna OX=33113 GN=TIC214 PE=3 SV=1[more]
Q4VZL04.6e-0467.74Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2[more]
BLAST of MC06g1114 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009738261.15.78e-1394.59Ycf1 [Siraitia siamensis] >QIB71654.1 Ycf1 [Siraitia siamensis][more]
QDL00004.15.78e-1394.59Ycf1 [Siraitia grosvenorii] >QIB71566.1 Ycf1 [Siraitia grosvenorii][more]
YP_009752881.15.78e-1394.59Ycf1 protein [Baijiania yunnanensis] >QIT05953.1 Ycf1 protein [Baijiania yunnane... [more]
YP_009674449.15.78e-1394.59photosystem I assembly protein Ycf1 [Siraitia grosvenorii] >QDK59448.1 photosyst... [more]
YP_009753231.11.08e-1291.89Ycf1 protein [Trichosanthes truncata] >QIT06303.1 Ycf1 protein [Trichosanthes tr... [more]
BLAST of MC06g1114 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A515BLT22.80e-1394.59Protein TIC 214 OS=Siraitia grosvenorii OX=190515 GN=ycf1 PE=3 SV=1[more]
A0A6C0U9952.80e-1394.59Protein TIC 214 OS=Siraitia siamensis OX=2695833 GN=ycf1 PE=3 SV=1[more]
A0A6H0EVE22.80e-1394.59Protein TIC 214 OS=Baijiania yunnanensis OX=381650 GN=ycf1 PE=3 SV=1[more]
A0A514YKY62.80e-1394.59Protein TIC 214 OS=Siraitia grosvenorii OX=190515 GN=ycf1 PE=3 SV=1[more]
A0A6H0EWE45.23e-1391.89Protein TIC 214 OS=Trichosanthes truncata OX=685060 GN=ycf1 PE=3 SV=1[more]
BLAST of MC06g1114 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC06g1114.1MC06g1114.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane