MC06g0932 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0932
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosome biogenesis regulatory protein
Location	MC06: 7985174 .. 7988827 (+)
RNA-Seq Expression	MC06g0932
Synteny	MC06g0932

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTATTTGATTTTTTTTCATATGATTGGTTAAATTGATTATTATCGATGAACAAAAGCAATAGTTAGGGTTCCAATCCCAACAGCAGAGCAGTCCACAGTCGTCGGCAGGTCACCGGAGCCACCCCCAAATTACAGAATCATCGTGCTCATCATTGGAATAAAAGTATTACGGTGGCCGGAGCATGGAGGCGGAGAATCAATATCCGTTTCAGATCGACCTGGGTAATCTCACGGCGTTCAATCCTCACCATCAATTTCCTTCCTCGCTCTCCTCCAGGTTAGTTTTGATTCGCTCCCAAAGTATACTCGGAGGACTGATTCTTCTTGAATTTTTCATCCTCTCTCGATTTTTGTTTCGAAATTCGCGTGTTACTTCAGTAGGTAGACGAAAAAAGGTTTGTCTGTAGAGATTTTTCTCTCCCTGAATTTGTGTTGTTTTTGTCTCACCGAGGCTGGAGTACATTGGTGTGTGTAATGTGTATTTTGGCTTTGCGATGCTATGCTATTCACATTACGCTGTACTGTTTTAAGAGTCTTCGTTTTATGAAGGATCAACTACATGCTTGCCTGAGATAGATACGCCTGCTCAAATGATAATGAACATTTACATGAGTGCATTAGTGACTTTGAAGTGTTAGTTACATTCTTCTTGCCAATCAAAGTAGAAGCCTCTTACTAATATTTAGCTTCATTATCTTTGATGCTCTTTTCGATGTTTAGAATATCCACGAGAGAATATCTAATTGCTTATTTTGTTAAAAGAGAACCTCTGTTATATTTGTTTAGTTTCTTTTTAAAAAAATTAGGGAGGATCTAGTTAATGAATGTCTGCAGAAGGGCATAGAGTTGGTTCAATTTATTGCCAACGAACTTTTCAATCGGCCTTCCACTGAAGACAGAGATGGTCCCCTTGTGAAGTTGCCTCCACCTACTACAAAATTGCCCAGAGAGAAGCATGTAAGGGGCTATGTGCTAATTTGTCATCTCATTTGTTTCTTTTTAAATCTGGATGATTTCTGTACTTGGTAACCACTGTCATTGATCGTGCTGTATTGAAGAGCAGTGGCTGCAAGTGTCAATTCTGTAGTTTTGGTTGAGGTGATATTTTCTTCTTTTACAGTTACCAAAGCCTAAACCTCCTACAAAATGGGAACTTTTTGCCAAAAAAAGAGGTCAGTTCCTTATGTGCACCCTTTTGTGCAAGGGTACATTTGATAGAGAAATAGCATATTCCATTATTTTCTGCAGAGAAAATAAATTTGAACTCAGCTAAAAGCAAGACGAGGAAACCGAGAAGAAATAGCAGCACATAATTAATTAATTTGATGACAAGCTTTTTTTCCCCAAGTATAATTCATTCACAATAATAATTATTATTTTTATTTTAAAACTTTTGCAGGTATAAAGAATCGTAAAAGAGATAAGATAGCATATGATGAACAGACGGGTACATGGAGACGTCGCCATGGTTATGATCGTGCAAATGATGAGGATAACATACCCATAATTGAGGCCAAGATGACTGATGGTAGTATTTTATGTGATCTTGCTTCTTGCAATATGATTATTTGTTCTACTAGTTATTCTAGTTCTGTTTTGCTTTTTCTGAACTTGATTTGCAAATCTGCACACAGTTGCAACATCCAGATAACCAATAGATTATTGGTTTTAATTACTGGGTGCATTTATGCTCAAGACACATAATAAGTACTGAAATGGTTGTGAAGTATCATGGTTGATAACTTGATTTGTCTTGCAGAGCCTGGGGAGGATCCATTTGCTACAAGGCGCGCAAATAAGAAAAACCGAGTTGAAAAGCAAGAAAAGAATCGGTTAGAGAATCTGAAGCAAGCTGCAAAAGTTGGTGCCCTACCAAGGTTTTACCTCTTAAATACAGTTTTTGGTTGTTGAATTTGATATAAGTTCTACTGCATTTTGTTTTATCTCAGTTTATACACGAGTTTCATTGAATTTTATTACTTGATCAACGTCTTCTCCAAAATGTTCTTTTTCATCTATTCCATCGGAGTCATTATCCATGTTGCTATTCTCAAGTTACCTGTTTTAAGGTCCATCTCCAGTTGTGTTTTCTCTTCCTCCTAGTTTTAACTCCAATCTATTCACGATAGCATAAAATTCACTGTACTCATGCAGCCACGTTCAACTAGCTGCCACCACTTTGCCCATAACGGGAACTCAAGCTGCACCTAAGAAAATTACCAAGGATGACCTAGGAAATGCAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGCTGGCAGGAGAAAAACCTGCTAAACATCAAGGAAAATATCGCAAGGTTAATTGAATAAGCCTGTTGATCCGCATTTATGCTCAAGTTTATTTTATACTTCTCGTAAAAAGTTTGTTGCACATTTTTTTTTGTGTTTGCATGCAGTTTCTGCCTGTTGTGGAGGGAACAGGGATTGGCTCCCAAGAAAAAGAGCAAACTGAGAAAGTTCTCAACAGATTAATTTCCAGAAATTCACATGAGATTCTCAACATTAATAAGGTATGACCGCTGAACTGCACATCTCTATTTGTTGAAGGATAAAACTCACAAAATTTGACAAGCAGCAAAAACACACCTCTCTTTTTGTTCTCTCATCACCCAAATTGGATTAAGTAGATGACATGTTACCTTTTTATATTATATGATTTAACATGATTGAAAATGGACCTTGTGGTGTAAATAGATCATGTCGTGATTGATATTCATTTATCATTTATGATGCAAGTAAAGATCATTATTTTTAGACGGAGAGAGGGGCTTTTGAATCACATGAAATTTTAGAGGTATGTTTGGGATATTTCTTAGAATTCAAGGACACGGTTGTACAACCTATAGAATAGATCCGGTTCAAGTAAGCTTATGTTTGGGATATTTCTAGAACAAGTACTTTTATAAAAAATACTTCTTGTTTTGTAACGAATCATTGGACACCCCTAAATGCTTTTGAAATTCGAGCCTTTGGGCCTAAAACACTCTGACACAGTGCTTTTGACTTTTTGAAAAGCACATTTATGTTACTCCCATTATAATAATGACAAAAAAAGTGCTTCTTGCCATCTCAAACTTACCCAAGAGTATTTTGGAACAATCTTTTCCTAAGCCTATTTTGGATTCCTTATCTTGATTTTCAGGCCGTCAACATGTACAACGTGAAAAGAGAAAAGAAACAAAAAGGGCAACGAGGAAAGTCTTCATCAATGTCAAGCAAGTTGAAACCAAATAAGAAACTCCAGAAGAAGTCGTTGAAGAAGGGATCTTCAAAGAAATGAATGATCCCTTTGCAATAGCATGAGTTCTTGTAGAGGTGCGTGTATTGGATTAAATTATGGCTTAAGTTTTTAATGTATCATTATCATCATTATTTTGTAGTGGAGAAATTTTAGTCATCTCGAAAGCAATTTTGTAGTTCTCATTTCAGCGGCCAAATCCTTCCCATAGTATCTCCCATTTTGCCTTGTTGGTTTTCTTCTCATCTTCGGTTCACATGATTCGCTCTTTGTTTTTTTTTTCTGGGTATTTTTTATGAAATTTATGTTTGTTTTTCTATGAGAATCCTTTTGATGTCTGTCATATGTTGTATAAATCATTATTTTGATTCTG

mRNA sequence

GGCTATTTGATTTTTTTTCATATGATTGGTTAAATTGATTATTATCGATGAACAAAAGCAATAGTTAGGGTTCCAATCCCAACAGCAGAGCAGTCCACAGTCGTCGGCAGGTCACCGGAGCCACCCCCAAATTACAGAATCATCGTGCTCATCATTGGAATAAAAGTATTACGGTGGCCGGAGCATGGAGGCGGAGAATCAATATCCGTTTCAGATCGACCTGGGTAATCTCACGGCGTTCAATCCTCACCATCAATTTCCTTCCTCGCTCTCCTCCAGGGAGGATCTAGTTAATGAATGTCTGCAGAAGGGCATAGAGTTGGTTCAATTTATTGCCAACGAACTTTTCAATCGGCCTTCCACTGAAGACAGAGATGGTCCCCTTGTGAAGTTGCCTCCACCTACTACAAAATTGCCCAGAGAGAAGCATTTACCAAAGCCTAAACCTCCTACAAAATGGGAACTTTTTGCCAAAAAAAGAGGTATAAAGAATCGTAAAAGAGATAAGATAGCATATGATGAACAGACGGGTACATGGAGACGTCGCCATGGTTATGATCGTGCAAATGATGAGGATAACATACCCATAATTGAGGCCAAGATGACTGATGAGCCTGGGGAGGATCCATTTGCTACAAGGCGCGCAAATAAGAAAAACCGAGTTGAAAAGCAAGAAAAGAATCGGTTAGAGAATCTGAAGCAAGCTGCAAAAGTTGGTGCCCTACCAAGCCACGTTCAACTAGCTGCCACCACTTTGCCCATAACGGGAACTCAAGCTGCACCTAAGAAAATTACCAAGGATGACCTAGGAAATGCAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGCTGGCAGGAGAAAAACCTGCTAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAGGGAACAGGGATTGGCTCCCAAGAAAAAGAGCAAACTGAGAAAGTTCTCAACAGATTAATTTCCAGAAATTCACATGAGATTCTCAACATTAATAAGGCCGTCAACATGTACAACGTGAAAAGAGAAAAGAAACAAAAAGGGCAACGAGGAAAGTCTTCATCAATGTCAAGCAAGTTGAAACCAAATAAGAAACTCCAGAAGAAGTCGTTGAAGAAGGGATCTTCAAAGAAATGAATGATCCCTTTGCAATAGCATGAGTTCTTGTAGAGGTGCGTGTATTGGATTAAATTATGGCTTAAGTTTTTAATGTATCATTATCATCATTATTTTGTAGTGGAGAAATTTTAGTCATCTCGAAAGCAATTTTGTAGTTCTCATTTCAGCGGCCAAATCCTTCCCATAGTATCTCCCATTTTGCCTTGTTGGTTTTCTTCTCATCTTCGGTTCACATGATTCGCTCTTTGTTTTTTTTTTCTGGGTATTTTTTATGAAATTTATGTTTGTTTTTCTATGAGAATCCTTTTGATGTCTGTCATATGTTGTATAAATCATTATTTTGATTCTG

Coding sequence (CDS)

ATGGAGGCGGAGAATCAATATCCGTTTCAGATCGACCTGGGTAATCTCACGGCGTTCAATCCTCACCATCAATTTCCTTCCTCGCTCTCCTCCAGGGAGGATCTAGTTAATGAATGTCTGCAGAAGGGCATAGAGTTGGTTCAATTTATTGCCAACGAACTTTTCAATCGGCCTTCCACTGAAGACAGAGATGGTCCCCTTGTGAAGTTGCCTCCACCTACTACAAAATTGCCCAGAGAGAAGCATTTACCAAAGCCTAAACCTCCTACAAAATGGGAACTTTTTGCCAAAAAAAGAGGTATAAAGAATCGTAAAAGAGATAAGATAGCATATGATGAACAGACGGGTACATGGAGACGTCGCCATGGTTATGATCGTGCAAATGATGAGGATAACATACCCATAATTGAGGCCAAGATGACTGATGAGCCTGGGGAGGATCCATTTGCTACAAGGCGCGCAAATAAGAAAAACCGAGTTGAAAAGCAAGAAAAGAATCGGTTAGAGAATCTGAAGCAAGCTGCAAAAGTTGGTGCCCTACCAAGCCACGTTCAACTAGCTGCCACCACTTTGCCCATAACGGGAACTCAAGCTGCACCTAAGAAAATTACCAAGGATGACCTAGGAAATGCAGCTGGAATGGCAGCAACTTCAACAGCCAGTGGTGGAAAATTTGACAAGAAGCTGGCAGGAGAAAAACCTGCTAAACATCAAGGAAAATATCGCAAGTTTCTGCCTGTTGTGGAGGGAACAGGGATTGGCTCCCAAGAAAAAGAGCAAACTGAGAAAGTTCTCAACAGATTAATTTCCAGAAATTCACATGAGATTCTCAACATTAATAAGGCCGTCAACATGTACAACGTGAAAAGAGAAAAGAAACAAAAAGGGCAACGAGGAAAGTCTTCATCAATGTCAAGCAAGTTGAAACCAAATAAGAAACTCCAGAAGAAGTCGTTGAAGAAGGGATCTTCAAAGAAATGA

Protein sequence

MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPSTEDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRRRHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGALPSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGKSSSMSSKLKPNKKLQKKSLKKGSSKK

Homology

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BLAST of MC06g0932 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 397.1 bits (1019), Expect = 1.9e-109
Identity = 207/320 (64.69%), Postives = 257/320 (80.31%), Query Frame = 0


Query: 2   EAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPSTE 61
           E E +  +Q+D+GNL AFNP+H+FPS+ SSR +LV E L +G +LVQ IAN+LFN PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 62  DRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRRR 121
             DGP+V+LPPPTTKLPREKH+P+PKPPTKWE FA K+GI+ RK++K+ +DEQT  ++RR
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 122 HGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGALP 181
           HGYDR ND++++PIIEAK +DEPG DPFA R  +KK RV KQEKNRL+NLK A K GALP
Sbjct: 124 HGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALP 183

Query: 182 SHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGKY 241
           SHVQLAAT+LPI+GT+A PKKI KD+LG+ AG+AATSTASGGKFDKKL GEKP K QGK+
Sbjct: 184 SHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKH 243

Query: 242 RKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGKS 301
            K+LPVV G G  + EKEQT  VL+++ S++SHEILN+ KA+NMYNVK+EKK+ G+    
Sbjct: 244 HKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKKSGR---- 303

Query: 302 SSMSSKLKPNKKLQKKSLKK 322
              S KLKP K + KK   K
Sbjct: 304 ---SDKLKPKKDITKKPANK 316

[Close]

BLAST of MC06g0932 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 2.1e-31
Identity = 108/299 (36.12%), Postives = 162/299 (54.18%), Query Frame = 0


Query: 10  QIDLGNLTAFNPHHQFPSSLSSREDLVNECLQK-GIELVQFIANELFNRPSTEDRDGPLV 69
           Q DLGNL A + +   P+ L          LQ    +  Q + N+L+  P+    +  + 
Sbjct: 33  QFDLGNLLASDRNP--PTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA 92

Query: 70  KLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRRRHGYDRAN 129
           +LP PTT+LPREK LP+P+P T+W+ FA+ +GI+ +K+  + +DE +G WRRR GY RA 
Sbjct: 93  RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR 152

Query: 130 DEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGALPSHVQLAA 189
           D+    +IE     +P ED FA R   KK RV K E NRL NL +A K+  LPS     A
Sbjct: 153 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS-----A 212

Query: 190 TTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVV 249
             L  TG Q      +K++LG A  +A  STAS G+F ++L  EK  +  GK RKF P+ 
Sbjct: 213 AGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLF 272

Query: 250 EGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGKSSSMSSK 308
              G  + EK+   ++L  + S+     L++ +A N    + ++++  +R K S    +
Sbjct: 273 ---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATNKQMREEDQEEAAKRRKMSQKGKR 312

[Close]

BLAST of MC06g0932 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-30
Identity = 106/300 (35.33%), Postives = 161/300 (53.67%), Query Frame = 0


Query: 10  QIDLGNLTAF--NPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPSTEDRDGPL 69
           + DLGNL A   NP      +  S E    E      +  Q + N+L+  P+    +  +
Sbjct: 33  EFDLGNLLASDRNPPTVLRQAGPSPE---AELRALARDNTQLLVNQLWQLPTERVEEAVV 92

Query: 70  VKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRRRHGYDRA 129
            +LP P T+LPREK LP+P+P T+W+ FA+ +GI+ +K+  + +DE +G WRRR GY RA
Sbjct: 93  ARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYKRA 152

Query: 130 NDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGALPSHVQLA 189
            D+    +IE   + +P ED FA R   KK RV K E NRL NL +A K+  +PS     
Sbjct: 153 RDDTKEWLIEVPGSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAHKM-QMPS----- 212

Query: 190 ATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPV 249
           +  L  TG Q      +K++LG A  +A  STAS G+F ++L  EK  +  GK RKF P+
Sbjct: 213 SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPL 272

Query: 250 VEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGKSSSMSSK 308
               G  + EK+   ++L  + S+     L++ +A N    + ++++  +R K S    K
Sbjct: 273 F---GDFAAEKKNQLELLRVMNSKKPQ--LDVTRATNKQMREEDQEEAAKRRKMSQKGKK 312

[Close]

BLAST of MC06g0932 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-30
Identity = 105/300 (35.00%), Postives = 161/300 (53.67%), Query Frame = 0


Query: 10  QIDLGNLTAF--NPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPSTEDRDGPL 69
           + DLGNL A   NP      +  S E    E      +  Q + N+L+  P+    +  +
Sbjct: 33  EFDLGNLLASDRNPPTVLRQAGPSPE---AELRALARDNTQLLINQLWRLPTERVEEAVV 92

Query: 70  VKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRRRHGYDRA 129
            +LP P T+LPREK LP+P+P T+W+ FA+ +GI+ +K+  + +DE +G WRRR GY RA
Sbjct: 93  ARLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRRRWGYKRA 152

Query: 130 NDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGALPSHVQLA 189
            D+    +IE   + +P ED FA R   KK RV K E NRL NL +A K+  +PS     
Sbjct: 153 RDDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKM-QMPS----- 212

Query: 190 ATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPV 249
           +  L  TG Q      +K++LG A  +A  STAS G+F ++L  EK  +  GK RKF P+
Sbjct: 213 SAGLHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPL 272

Query: 250 VEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGKSSSMSSK 308
               G  + EK+   ++L  + S+     L++ +A N    + ++++  +R K S    +
Sbjct: 273 F---GDFAAEKKNQLELLRVMNSKKPR--LDVTRATNKQMREEDQEEAAKRRKMSQKGKR 312

[Close]

BLAST of MC06g0932 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.1e-27
Identity = 109/328 (33.23%), Postives = 171/328 (52.13%), Query Frame = 0


Query: 10  QIDLGNLTAF--NP----HHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPSTEDR 69
           + DLGNL A   NP     H  P+  +    L         +  Q + N+L+  P+    
Sbjct: 33  EFDLGNLLASDRNPPTGLRHAGPTQEAELRALAR-------DNTQLLINQLWQLPTERVE 92

Query: 70  DGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRRRHG 129
           +  + +LP P+T+LPREK +P+P+P T+W+ FA+ +GI+ +K+  + +DE +G WRRR G
Sbjct: 93  EALVARLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGRWRRRWG 152

Query: 130 YDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGALPSH 189
           Y RA D+    +IE     +P ED FA R   KK RV K E NRL NL +A K+  LPS 
Sbjct: 153 YQRARDDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKM-QLPS- 212

Query: 190 VQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGKYRK 249
               A  +  TG Q      +K++LG A  +A  STAS G+F ++L  EK  +  GK RK
Sbjct: 213 ----AAGMHPTGHQ------SKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRK 272

Query: 250 FLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGKSSS 309
           F P+    G  + E++   ++L  + S+     ++I +A N   ++ E +++  + +  S
Sbjct: 273 FQPLF---GDFAAERKSQLEMLRVMNSKKPQ--MDITRATNK-QMREEDQEEAAKRRKMS 332

Query: 310 MSSKLK-----PNKKLQKKSLKKGSSKK 327
              K K     P  K +  +  +G  +K
Sbjct: 333 QKGKRKGGRQGPGSKRKGGTPSQGGKRK 335

[Close]

BLAST of MC06g0932 vs. NCBI nr
Match: XP_022154113.1 (ribosome biogenesis regulatory protein homolog [Momordica charantia])

HSP 1 Score: 622 bits (1603), Expect = 4.75e-224
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST
Sbjct: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR
Sbjct: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK
Sbjct: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK
Sbjct: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300

Query: 301 SSSMSSKLKPNKKLQKKSLKKGSSKK 326
           SSSMSSKLKPNKKLQKKSLKKGSSKK
Sbjct: 301 SSSMSSKLKPNKKLQKKSLKKGSSKK 326

[Close]

BLAST of MC06g0932 vs. NCBI nr
Match: XP_038878495.1 (ribosome biogenesis regulatory protein homolog [Benincasa hispida])

HSP 1 Score: 556 bits (1432), Expect = 6.27e-198
Identity = 287/325 (88.31%), Postives = 306/325 (94.15%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           ME ENQ+PFQ+DLGNL AFNPHH FPS  SSRE+LVNECLQKG ELVQFIAN+LFN PST
Sbjct: 1   MEIENQHPFQVDLGNLMAFNPHHHFPSLPSSREELVNECLQKGTELVQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLVKLPPPTT+LPREK LPKPKPPTKWELFA+K+GIK RK+DK  YDEQ GTW+R
Sbjct: 61  EDRDGPLVKLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKKRKKDKRVYDEQAGTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDEPGEDPFA RRA+KK RVEKQEKNRL+NLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSH+QLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKKL GEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLTGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGSQEKEQTEKVLNRLIS+NSHEILN++KAVNMYNVK+EKKQ+ QRGK
Sbjct: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSHEILNVSKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSSKLKPNKKLQKKSLKKGSSK 325
           SSSMSSKLKPNKKLQKK LKKGSSK
Sbjct: 301 SSSMSSKLKPNKKLQKKPLKKGSSK 325

[Close]

BLAST of MC06g0932 vs. NCBI nr
Match: XP_022933585.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_022933586.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_022933587.1 ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >KAG6588164.1 Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 556 bits (1432), Expect = 6.50e-198
Identity = 290/326 (88.96%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           ME ENQ PFQIDLGNL AFNPHHQ+PS  SSREDLV+ECLQKG EL QFIAN+LFN PST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLV+LPPP+T+LPREK LPKPKPPTKWELFAKKRGIKNRK+DKI YD+QTG+W+R
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDEPG DPFA RRANKKNRVEKQE+N+L+NLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSHVQLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKKLAGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGSQE+EQTEKVLNRLIS+NSHEILNINKAVNMYNVK+EKKQ+ QRGK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSS-KLKPNKKLQKKSLKKGSSK 325
           SSSMSS KLKPNKKLQKK LKKGSSK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSK 326

[Close]

BLAST of MC06g0932 vs. NCBI nr
Match: XP_022967754.1 (ribosome biogenesis regulatory protein homolog [Cucurbita maxima] >XP_022967763.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima] >XP_022967772.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima] >XP_022967782.1 ribosome biogenesis regulatory protein homolog [Cucurbita maxima])

HSP 1 Score: 555 bits (1431), Expect = 9.23e-198
Identity = 290/326 (88.96%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           ME ENQ PFQIDLGNL AFNPHH+FPS  SSREDLV+ECLQKG EL QFIAN+LFN PST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLV+LPPP+T+LPREK LPKPKPPTKWELFAKKRGIKNRK+DKI YD+QTG+W+R
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDEPG DPFA RRANKKNRVEKQE+N+L+NLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSHVQLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKKLAGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGSQE+EQTEKVLNRLIS+NSHEILNINKAVNMYNVK+EKKQ+ QRGK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSS-KLKPNKKLQKKSLKKGSSK 325
           SSSMSS KLKPNKKLQKK LKKGSSK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSK 326

[Close]

BLAST of MC06g0932 vs. NCBI nr
Match: XP_023531368.1 (ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_023531369.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_023531371.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_023531372.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_023531373.1 ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 550 bits (1416), Expect = 1.78e-195
Identity = 287/326 (88.04%), Postives = 307/326 (94.17%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           ME ENQ PFQIDLGNL AFNPHHQFPS  SSREDLV+ECLQKG EL QFIAN+LFN PST
Sbjct: 1   METENQQPFQIDLGNLMAFNPHHQFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLV+LPPP+T+LPREK LPKPKPPTKWELFAKKRGIKNRK+DKI YD+QTG+W+R
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDEPG DPFA RRANKK+RVEKQE+N+L+NLK+AAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKSRVEKQERNQLQNLKKAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSHVQLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKKLAGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGSQE+EQTEKVLNRLIS+NSHEILNINKAVNMY VK+EKKQ+ QRGK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYTVKKEKKQRNQRGK 300

Query: 301 SSSMSS-KLKPNKKLQKKSLKKGSSK 325
           SSSMSS KLKPNKKLQKK LKKGS K
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSPK 326

[Close]

BLAST of MC06g0932 vs. ExPASy TrEMBL
Match: A0A6J1DJD9 (Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC111021449 PE=3 SV=1)

HSP 1 Score: 622 bits (1603), Expect = 2.30e-224
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST
Sbjct: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR
Sbjct: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK
Sbjct: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK
Sbjct: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300

Query: 301 SSSMSSKLKPNKKLQKKSLKKGSSKK 326
           SSSMSSKLKPNKKLQKKSLKKGSSKK
Sbjct: 301 SSSMSSKLKPNKKLQKKSLKKGSSKK 326

[Close]

BLAST of MC06g0932 vs. ExPASy TrEMBL
Match: A0A6J1F066 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111440969 PE=3 SV=1)

HSP 1 Score: 556 bits (1432), Expect = 3.15e-198
Identity = 290/326 (88.96%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           ME ENQ PFQIDLGNL AFNPHHQ+PS  SSREDLV+ECLQKG EL QFIAN+LFN PST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHQYPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLV+LPPP+T+LPREK LPKPKPPTKWELFAKKRGIKNRK+DKI YD+QTG+W+R
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDEPG DPFA RRANKKNRVEKQE+N+L+NLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSHVQLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKKLAGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGSQE+EQTEKVLNRLIS+NSHEILNINKAVNMYNVK+EKKQ+ QRGK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSS-KLKPNKKLQKKSLKKGSSK 325
           SSSMSS KLKPNKKLQKK LKKGSSK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSK 326

[Close]

BLAST of MC06g0932 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 555 bits (1431), Expect = 4.47e-198
Identity = 290/326 (88.96%), Postives = 309/326 (94.79%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           ME ENQ PFQIDLGNL AFNPHH+FPS  SSREDLV+ECLQKG EL QFIAN+LFN PST
Sbjct: 1   MEMENQQPFQIDLGNLMAFNPHHKFPSLSSSREDLVSECLQKGAELAQFIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLV+LPPP+T+LPREK LPKPKPPTKWELFAKKRGIKNRK+DKI YD+QTG+W+R
Sbjct: 61  EDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRGIKNRKKDKIVYDDQTGSWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDE+NIPIIEAKMTDEPG DPFA RRANKKNRVEKQE+N+L+NLKQAAKVGAL
Sbjct: 121 RHGYDRANDEENIPIIEAKMTDEPGVDPFAARRANKKNRVEKQERNQLQNLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSHVQLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKKLAGEKPAKHQGK
Sbjct: 181 PSHVQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKLAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGSQE+EQTEKVLNRLIS+NSHEILNINKAVNMYNVK+EKKQ+ QRGK
Sbjct: 241 YRKFLPVVEGTGIGSQEREQTEKVLNRLISKNSHEILNINKAVNMYNVKKEKKQRNQRGK 300

Query: 301 SSSMSS-KLKPNKKLQKKSLKKGSSK 325
           SSSMSS KLKPNKKLQKK LKKGSSK
Sbjct: 301 SSSMSSNKLKPNKKLQKKPLKKGSSK 326

[Close]

BLAST of MC06g0932 vs. ExPASy TrEMBL
Match: A0A0A0LZY0 (Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G605610 PE=3 SV=1)

HSP 1 Score: 542 bits (1397), Expect = 6.27e-193
Identity = 284/325 (87.38%), Postives = 305/325 (93.85%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           ME ENQ+PFQIDLG+L AFNPHHQFPS  SSREDLV+ECLQKG ELVQ IAN+LFN PST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSLPSSREDLVSECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLV+LPPPTT+LPREK LPKPKPPTKWELFA+K+GIKNRK+DK  YDEQT TW+R
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFAQKKGIKNRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDE GEDPFA RRA+KK RVEKQEKNRL+NLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSH+QLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKK AGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGS+E+EQTEKVL+RLIS+NSHEILN+NKAVNMYNVK+EKKQ+ Q GK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQ-GK 300

Query: 301 SSSMSSKLKPNKKLQKKSLKKGSSK 325
           SSSMSSKLKPNKKLQKK LKKGSSK
Sbjct: 301 SSSMSSKLKPNKKLQKKPLKKGSSK 324

[Close]

BLAST of MC06g0932 vs. ExPASy TrEMBL
Match: A0A5A7TFQ4 (Ribosome biogenesis regulatory protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00350 PE=3 SV=1)

HSP 1 Score: 534 bits (1376), Expect = 1.03e-189
Identity = 278/325 (85.54%), Postives = 301/325 (92.62%), Query Frame = 0


Query: 1   MEAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPST 60
           ME ENQ+PFQIDLG+L AFNPHHQFPS   SRE+L++ECLQKG ELVQ IAN+LFN PST
Sbjct: 1   MEIENQHPFQIDLGHLMAFNPHHQFPSIPPSREELISECLQKGTELVQSIANDLFNLPST 60

Query: 61  EDRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRR 120
           EDRDGPLV+LPPPTT+LPREK LPKPKPPTKWELFA K+GIK RK+DK  YDEQT TW+R
Sbjct: 61  EDRDGPLVRLPPPTTRLPREKPLPKPKPPTKWELFALKKGIKKRKKDKRVYDEQTHTWKR 120

Query: 121 RHGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGAL 180
           RHGYDRANDEDNIPIIEAKMTDE GEDPFA RRA+KK RVEKQEKNRL+NLKQAAKVGAL
Sbjct: 121 RHGYDRANDEDNIPIIEAKMTDESGEDPFAARRADKKKRVEKQEKNRLQNLKQAAKVGAL 180

Query: 181 PSHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGK 240
           PSH+QLAAT LPITGTQAAPKKITKD+LGN AGMAATSTASGGKFDKK AGEKPAKHQGK
Sbjct: 181 PSHIQLAATALPITGTQAAPKKITKDELGNVAGMAATSTASGGKFDKKFAGEKPAKHQGK 240

Query: 241 YRKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGK 300
           YRKFLPVVEGTGIGS+E+EQTEKVL+RLIS+NSHEILN+NKAVNMYNVK+EKKQ+ Q+GK
Sbjct: 241 YRKFLPVVEGTGIGSREREQTEKVLSRLISKNSHEILNVNKAVNMYNVKKEKKQRNQQGK 300

Query: 301 SSSMSSKLKPNKKLQKKSLKKGSSK 325
           SSS SSKLK NKKLQKK LKKGSSK
Sbjct: 301 SSSSSSKLKANKKLQKKPLKKGSSK 325

[Close]

BLAST of MC06g0932 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 397.1 bits (1019), Expect = 1.3e-110
Identity = 207/320 (64.69%), Postives = 257/320 (80.31%), Query Frame = 0


Query: 2   EAENQYPFQIDLGNLTAFNPHHQFPSSLSSREDLVNECLQKGIELVQFIANELFNRPSTE 61
           E E +  +Q+D+GNL AFNP+H+FPS+ SSR +LV E L +G +LVQ IAN+LFN PSTE
Sbjct: 4   EMETEQIYQVDVGNLLAFNPNHRFPSAPSSRGELVKEILTEGTKLVQEIANKLFNFPSTE 63

Query: 62  DRDGPLVKLPPPTTKLPREKHLPKPKPPTKWELFAKKRGIKNRKRDKIAYDEQTGTWRRR 121
             DGP+V+LPPPTTKLPREKH+P+PKPPTKWE FA K+GI+ RK++K+ +DEQT  ++RR
Sbjct: 64  TNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKGIQKRKKEKVVWDEQTNQFKRR 123

Query: 122 HGYDRANDEDNIPIIEAKMTDEPGEDPFATRRANKKNRVEKQEKNRLENLKQAAKVGALP 181
           HGYDR ND++++PIIEAK +DEPG DPFA R  +KK RV KQEKNRL+NLK A K GALP
Sbjct: 124 HGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDDKKKRVGKQEKNRLQNLKAAEKAGALP 183

Query: 182 SHVQLAATTLPITGTQAAPKKITKDDLGNAAGMAATSTASGGKFDKKLAGEKPAKHQGKY 241
           SHVQLAAT+LPI+GT+A PKKI KD+LG+ AG+AATSTASGGKFDKKL GEKP K QGK+
Sbjct: 184 SHVQLAATSLPISGTKAQPKKIGKDELGDVAGLAATSTASGGKFDKKLPGEKPPKKQGKH 243

Query: 242 RKFLPVVEGTGIGSQEKEQTEKVLNRLISRNSHEILNINKAVNMYNVKREKKQKGQRGKS 301
            K+LPVV G G  + EKEQT  VL+++ S++SHEILN+ KA+NMYNVK+EKK+ G+    
Sbjct: 244 HKYLPVVSGRGDVNAEKEQTNNVLSKIFSKHSHEILNVGKAINMYNVKKEKKKSGR---- 303

Query: 302 SSMSSKLKPNKKLQKKSLKK 322
              S KLKP K + KK   K
Sbjct: 304 ---SDKLKPKKDITKKPANK 316

The following BLAST results are available for this feature:

BLAST of MC06g0932 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	1.9e-109	64.69	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q15050	2.1e-31	36.12	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]
A1A5P2	1.7e-30	35.33	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]
Q9CYH6	2.3e-30	35.00	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
Q2KIH4	3.1e-27	33.23	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]

BLAST of MC06g0932 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154113.1	4.75e-224	100.00	ribosome biogenesis regulatory protein homolog [Momordica charantia]	[more]
XP_038878495.1	6.27e-198	88.31	ribosome biogenesis regulatory protein homolog [Benincasa hispida]	[more]
XP_022933585.1	6.50e-198	88.96	ribosome biogenesis regulatory protein homolog [Cucurbita moschata] >XP_02293358...	[more]
XP_022967754.1	9.23e-198	88.96	ribosome biogenesis regulatory protein homolog [Cucurbita maxima] >XP_022967763....	[more]
XP_023531368.1	1.78e-195	88.04	ribosome biogenesis regulatory protein homolog [Cucurbita pepo subsp. pepo] >XP_...	[more]

BLAST of MC06g0932 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJD9	2.30e-224	100.00	Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1F066	3.15e-198	88.96	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1HW20	4.47e-198	88.96	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]
A0A0A0LZY0	6.27e-193	87.38	Ribosome biogenesis regulatory protein OS=Cucumis sativus OX=3659 GN=Csa_1G60561...	[more]
A0A5A7TFQ4	1.03e-189	85.54	Ribosome biogenesis regulatory protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of MC06g0932 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	1.3e-110	64.69	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 151..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 310..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..164
None	No IPR available	PANTHER	PTHR17602:SF5	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..320
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 8..170 e-value: 1.0E-52 score: 178.3
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 1..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0932.1	MC06g0932.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus