MC06g0911 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0911
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	60S ribosomal protein L30
Location	MC06: 7663266 .. 7666727 (+)
RNA-Seq Expression	MC06g0911
Synteny	MC06g0911

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGACCCGATAACCCAAAGACTTACCCTAAACCACTGGCCGTTTCTCTCTCTATATATTCTTTGAAATTAGGGTTTCTAGTGTTCTTTAACCATTCTCGTCGGCGAGCTGCAGCTTTCTCATCTCCTCAACAATGGTGGCCGCCAAGAAGACCGTAAGTTTCTCTCCTTCTACCCTCACTTTCCTCCTCTGCGGCTTAGTGTTGGGACTAGTTTCTATTGAATCTCATTTGGTTCTGATTAAGGAGGAATAGCGAACCGGCGATTCAGATTTTTCCTTCGATTTTCGTTTTGCGTTTGCTAATTCTTGGCGAGGGCTGACATTTTTCTTGTTGTGATGATTTTAACAGAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTCCTGAAGACCTTGAGGAACTCTAAAGGTAAATCTGTTGTTGAAGTTTTTTCATCTGATCCGATCTCTGGACTTGTCTCGATGGATGGGAGTTTATTCGTTGTTTAATCAGCTCATTAGGTGGTTTTTCCTTTACTAATTTTCGGTTGATTATTTAGTTGATTAGTTGTATCTTAGCGAGGGTTGGTTTTGACTGAAATTACTGAAACCGTAGATCAAAATCTGGTCCCAAGTCACAAATAATTAATTTTATGTTTTTCGATCGTAAACTTGTTGCCTACAACATTCAACCCATTGACGAGATTCTTCGGTTTGGCAAAATAATCTTTCATGTTAATTGAGATTGGGGTTATTCTTGGCCTCGGAATTGATCTCGATTTGGGTCACTAGCATTATTTCAAATTACTATGTTTCTGTATTTGCTTCCAGCAGGGATGAGATCCGTAGCATCTTATTTGTTATCCATGTTTCTATACCTGAGTGTTTACATTTGAGTTTATATCTGTTTTTATGTTTGCAGGTAAGCTGATTATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCCGAGATCGAGTATTATGCGATGTTGGCAAAGGTTGGAGTTCACCATTACAATGGAAGTAAGTTCCTGTTCTGTTTAATAATGAACTGGACTGACCCTTTATTTTTCGTACTACATTTCAATTTCTTTGGCACTCAATATAAGAGCATGTATCCATCTACTTACATGTTGTATTCTGAATGAAAAGTTCAAATTGTTTTCATCCTGATTGCAGATATGATATCAAGCTAGAATTGTTAGATTTCTTAATGGTCTTTTCCTGTTTAACATGAGCATTTGCTGCCACATATCACTAATGTGTTCATTTTTTTTGACTGTTTATCGCTTTTCTTGTGTGGCATCTTTTGTTTTTGATCTAAAGCTGATTTTCTTAATTCTGAAAGACTTGTAAACTGATTTTTATTTTTATGTTTTCAGGCAATGTAGACCTTGGGACTGCTTGTGGCAAATACTACAGAGTATGCTGCCTCAGCATTATCGATCCAGGTACACTTTTCTCTGATCAAGTTTCTGTTTTTGGACGACCTCCCTTGCGTAACGTTTTGATTGTGGAATTTGAATGGCTTTCAGGTGATTCGGATATCATCAAGAGCATTCCTGGAGAAAGTTAGGTTGCAACTTCCTCTCAGATCATAGATTTTTGTTTTGAGTTTCTTTTTAATCCACTTGATTTTGGGTTGGATGTTAGTGACGTTTTTGCTTGTGAGGCATGTTATTATTGATCAAATGGTTTCATTATAAACTTTTTTATGTATGAGATCTTATTCCAGAGAACTTTGATATCATTATTTTGATGTTCCAATTACCTATGTCAATTAGAAGCATGTTGTCACCAAATGTTTATTTTAGTATTGATTAATTCTGCTTCTTCAATTGGTTCGTCGCTCGAATCTCGGCTTAACTAGATGTAAGAGTAGTTTTAAATCACTTTAAAACACAATCTCTTCATGCAGATGCAGTTGAAATCTGGAGATTTCTTTTTGTGATGGTTTCGGCTGAACACTTGTTTGAAGAAGAATTAACTTTAAGTATTGGAGTCTTTTTAAGAAGTGTTAGAAGAAATACAACATCTTTAAGCATTAGATTCTTAAGGGCATAATTTAAGTTGTGTATTTTAGTAATGTACTTGTTCCTCTTTTTTTTAATTTTAGTTTCTCGTTTTTTTAATTTTTGTTATTAGAACGTTACGTAGTTGTTTTTGTTTTTGATTTTTTTAGAAGGTAGGAATTTTATATACAACACAACCAAATCAAGTTTTTTTCTTTCTTATCTTCAGCTTTTTTTCTAAGCAAATTAAAATAATACTTCATCATTTTGACTTGTATGATGCATGATTAATATTTATAAGTTATGTATATGTTTTTATTTATTTTGAAAAAGAGTAAACAAGAACCAATAAATGAAAACATTATCAAATGAGATCATATTTATCGGAACAAGTGCCCTTAATTCAAGGCAGATAAGGCCATGAACCAAAAGAGATTTTTGTAATAAAAAAAGTAAAAACCACCGTATGATTTCATTCAATTATAAAAAAGTTATCTTTTATTAAGAGGGTACGATGAGGAAAAAAAACCCAAATAAGCATTCAAAACTTCAAAATGTTGGAATATGATTGGCATTTTAAAAGTTACAAAGGTTCAATTACTTATAATTAAAAAAATGAAATTAGATCTACAATCTACTATACCATAGAGTTTATCCTTTCCAAAAGAGTTGAAAAAATTATATAAAATTTAAAATTGATTTAAACTTGTGAATACATGCCATTGGGCTATATTTAATTATTTATATAAATTTAAAAATTTGTTTGAAAATTATATAATAATAAAATTAAATTAGGGGAAATTAAGAAAGGAAGTATATTTAAAAAGAAGAAAATAATTGTAAAATATAAACTTGTAAATATTTATGTGAACGGTATATATTAGTTAATTTTTTCCATGCAAGATATAGATTTGACAATTACTGTGATAAGAAAAGGTATTGGAAGAAAATGTGAATATTAATTTAAAACTCATGAATTAATAAATTGTAATCATACTTGTTTAATAACAATCTTCTCATTCATAATTTAATTTTAAAATTCAAGCCCAATTTTAAAAACAAAGAGTCAACAATTTTATTTTTCTGCATCTAATATTAATACATGTTGATTAATAATTTTATTAATTTTCTAACCTCTATATCTATATCTATCTATAATATATTAAAAAATACGGATGTGGAAGAAACATTTTTTTTGGACAATATTAACCCTTGCTTCTTTTGTAATATACAAATTATCTTTCTCTTCAATTTATGTCTCTCTCATCCATGGCTCTTCTTTTTTATATGATACTCTCCTATCTTTTCTCATTTATCTATCCCTTATTTAATTATAATTTTCTTCTCTCGTTAACTTGAAAAGCTAAGAATATAAAAAATTTTGTCTTTAATTTTAAAATTACATTTTTTTACTTTTAATTAGG

mRNA sequence

CCCGACCCGATAACCCAAAGACTTACCCTAAACCACTGGCCGTTTCTCTCTCTATATATTCTTTGAAATTAGGGTTTCTAGTGTTCTTTAACCATTCTCGTCGGCGAGCTGCAGCTTTCTCATCTCCTCAACAATGGTGGCCGCCAAGAAGACCAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTCCTGAAGACCTTGAGGAACTCTAAAGGTAAGCTGATTATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCCGAGATCGAGTATTATGCGATGTTGGCAAAGGTTGGAGTTCACCATTACAATGGAAGCAATGTAGACCTTGGGACTGCTTGTGGCAAATACTACAGAGTATGCTGCCTCAGCATTATCGATCCAGGTGATTCGGATATCATCAAGAGCATTCCTGGAGAAAGTTAGG

Coding sequence (CDS)

ATGGTGGCCGCCAAGAAGACCAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCTCTCGTCATGAAGAGTGGGAAATATACATTGGGATACAAAACCGTCCTGAAGACCTTGAGGAACTCTAAAGGTAAGCTGATTATCATTGCCAACAACTGCCCTCCACTCCGAAAGTCCGAGATCGAGTATTATGCGATGTTGGCAAAGGTTGGAGTTCACCATTACAATGGAAGCAATGTAGACCTTGGGACTGCTTGTGGCAAATACTACAGAGTATGCTGCCTCAGCATTATCGATCCAGGTGATTCGGATATCATCAAGAGCATTCCTGGAGAAAGTTAG

Protein sequence

MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES

Homology

[Close]

BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.9e-56
Identity = 104/111 (93.69%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLK+LR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSI+DPGDSDIIK++PG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIVDPGDSDIIKTLPGD 111

[Close]

BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.6e-54
Identity = 101/111 (90.99%), Postives = 110/111 (99.10%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESIN+RLALVMKSGK+TLGYKTVL++LR++KGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RVCCLSIID GDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVCCLSIIDAGDSDIIKSIPGD 111

[Close]

BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: Q9C8F7 (Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 8.9e-51
Identity = 94/111 (84.68%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYN +NVDLGTACGKY+RV CLSI+DPGDSDIIKS+PG+
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111

[Close]

BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-50
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR SKGKLI+I+ NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPGDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111

[Close]

BLAST of MC06g0911 vs. ExPASy Swiss-Prot
Match: O48558 (60S ribosomal protein L30 OS=Zea mays OX=4577 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 2.6e-50
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVA KKTKK+ ++INN+L LVMKSGKYTLGYKTVL+TLRNSK KL+IIANNCPPLRKSEI
Sbjct: 1   MVATKKTKKSTDNINNKLQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKV VHH++G+NVDLGTACGKY+RVCCLSIIDPGDSDIIK+ PGE
Sbjct: 61  EYYAMLAKVTVHHFHGNNVDLGTACGKYFRVCCLSIIDPGDSDIIKTTPGE 111

[Close]

BLAST of MC06g0911 vs. NCBI nr
Match: XP_022960585.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_022988235.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023515547.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7022349.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228 bits (580), Expect = 3.59e-75
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGES
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSLPGES 112

[Close]

BLAST of MC06g0911 vs. NCBI nr
Match: XP_038878626.1 (60S ribosomal protein L30 [Benincasa hispida])

HSP 1 Score: 227 bits (579), Expect = 5.10e-75
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGES
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSMPGES 112

[Close]

BLAST of MC06g0911 vs. NCBI nr
Match: XP_022157366.1 (60S ribosomal protein L30 [Momordica charantia])

HSP 1 Score: 227 bits (578), Expect = 1.60e-74
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111

[Close]

BLAST of MC06g0911 vs. NCBI nr
Match: XP_022925483.1 (60S ribosomal protein L30 [Cucurbita moschata] >XP_022968625.1 60S ribosomal protein L30 [Cucurbita maxima] >XP_023529418.1 60S ribosomal protein L30 [Cucurbita pepo subsp. pepo] >KAG6588153.1 60S ribosomal protein L30, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022046.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225 bits (574), Expect = 2.96e-74
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPG+S
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS 112

[Close]

BLAST of MC06g0911 vs. NCBI nr
Match: XP_006340286.1 (PREDICTED: 60S ribosomal protein L30 [Solanum tuberosum])

HSP 1 Score: 224 bits (572), Expect = 5.97e-74
Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGD 111

[Close]

BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A6J1JJ11 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111485536 PE=3 SV=1)

HSP 1 Score: 228 bits (580), Expect = 1.74e-75
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGES
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSLPGES 112

[Close]

BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A6J1H9H7 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111461321 PE=3 SV=1)

HSP 1 Score: 228 bits (580), Expect = 1.74e-75
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKS+PGES
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSLPGES 112

[Close]

BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A6J1DXV1 (60S ribosomal protein L30 OS=Momordica charantia OX=3673 GN=LOC111024087 PE=3 SV=1)

HSP 1 Score: 227 bits (578), Expect = 7.73e-75
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111

[Close]

BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A6J1HXQ4 (60S ribosomal protein L30 OS=Cucurbita maxima OX=3661 GN=LOC111467784 PE=3 SV=1)

HSP 1 Score: 225 bits (574), Expect = 1.43e-74
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLR+SKGKLIIIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRSSKGKLIIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGES 112
           EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPG+S
Sbjct: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGDS 112

[Close]

BLAST of MC06g0911 vs. ExPASy TrEMBL
Match: A0A2N9FM19 (Ribosomal_L7Ae domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16095 PE=3 SV=1)

HSP 1 Score: 225 bits (574), Expect = 1.43e-74
Identity = 109/111 (98.20%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKL+IIANNCPPLRKSEI
Sbjct: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLVIIANNCPPLRKSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111
           EYYAMLAKVGVHHYNG+NVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 111

[Close]

BLAST of MC06g0911 vs. TAIR 10
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 200.7 bits (509), Expect = 6.3e-52
Identity = 94/111 (84.68%), Postives = 108/111 (97.30%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVAAKKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAAKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYN +NVDLGTACGKY+RV CLSI+DPGDSDIIKS+PG+
Sbjct: 61  EYYAMLAKVGVHHYNRNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSLPGD 111

[Close]

BLAST of MC06g0911 vs. TAIR 10
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 200.3 bits (508), Expect = 8.3e-52
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MV  KKTKK+HE IN+RLALVMKSGKYTLGYK+VLK+LR SKGKLI+I+ NCPPLR+SEI
Sbjct: 1   MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVHHYNG+NVDLGTACGKY+RV CLSI+DPGDSDIIKSIPG+
Sbjct: 61  EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIPGD 111

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BLAST of MC06g0911 vs. TAIR 10
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-50
Identity = 91/111 (81.98%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEI 60
           MVA KK KK+HE IN+RLALVMKSGKYTLGYK+VLK+LR+SKGKLI+I++NCPPLR+SEI
Sbjct: 1   MVAEKKAKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEI 60

Query: 61  EYYAMLAKVGVHHYNGSNVDLGTACGKYYRVCCLSIIDPGDSDIIKSIPGE 112
           EYYAMLAKVGVH YNG+NVDLGTACGKY+RV CLSI+DPGDSDIIK++PG+
Sbjct: 61  EYYAMLAKVGVHRYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKTLPGD 111

The following BLAST results are available for this feature:

BLAST of MC06g0911 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49884	1.9e-56	93.69	60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1	[more]
Q9M5M6	6.6e-54	90.99	60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1	[more]
Q9C8F7	8.9e-51	84.68	Putative 60S ribosomal protein L30-1 OS=Arabidopsis thaliana OX=3702 GN=RPL30A P...	[more]
Q8VZ19	1.2e-50	84.68	60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1	[more]
O48558	2.6e-50	84.68	60S ribosomal protein L30 OS=Zea mays OX=4577 GN=RPL30 PE=3 SV=1	[more]

BLAST of MC06g0911 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960585.1	3.59e-75	99.11	60S ribosomal protein L30-like [Cucurbita moschata] >XP_022988235.1 60S ribosoma...	[more]
XP_038878626.1	5.10e-75	99.11	60S ribosomal protein L30 [Benincasa hispida]	[more]
XP_022157366.1	1.60e-74	100.00	60S ribosomal protein L30 [Momordica charantia]	[more]
XP_022925483.1	2.96e-74	98.21	60S ribosomal protein L30 [Cucurbita moschata] >XP_022968625.1 60S ribosomal pro...	[more]
XP_006340286.1	5.97e-74	98.20	PREDICTED: 60S ribosomal protein L30 [Solanum tuberosum]	[more]

BLAST of MC06g0911 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJ11	1.74e-75	99.11	60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111485536 PE=3 ...	[more]
A0A6J1H9H7	1.74e-75	99.11	60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111461321 PE=...	[more]
A0A6J1DXV1	7.73e-75	100.00	60S ribosomal protein L30 OS=Momordica charantia OX=3673 GN=LOC111024087 PE=3 SV...	[more]
A0A6J1HXQ4	1.43e-74	98.21	60S ribosomal protein L30 OS=Cucurbita maxima OX=3661 GN=LOC111467784 PE=3 SV=1	[more]
A0A2N9FM19	1.43e-74	98.20	Ribosomal_L7Ae domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCU...	[more]

BLAST of MC06g0911 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G36240.1	6.3e-52	84.68	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT1G77940.1	8.3e-52	84.68	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT3G18740.1	2.0e-50	81.98	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 13..105 e-value: 2.3E-24 score: 84.9
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 2..108 e-value: 3.9E-54 score: 182.8
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 13..106
None	No IPR available	PANTHER	PTHR11449:SF23	60S RIBOSOMAL PROTEIN L30	coord: 1..112
IPR039109	Ribosomal protein L30/YlxQ	PANTHER	PTHR11449	RIBOSOMAL PROTEIN L30	coord: 1..112
IPR022991	Ribosomal protein L30e, conserved site	PROSITE	PS00993	RIBOSOMAL_L30E_2	coord: 80..100
IPR022991	Ribosomal protein L30e, conserved site	PROSITE	PS00709	RIBOSOMAL_L30E_1	coord: 24..48
IPR000231	Ribosomal protein L30e	HAMAP	MF_00481	Ribosomal_L30e	coord: 12..109 score: 21.5208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0911.1	MC06g0911.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome