Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTGTCTGAGAAACCCATCTCCTTACTCCAAGAAAATGAAATTTTCGTCAACAAAATTCTCTCCAGAAACTCCTCCTTCGGCCGCTCTGCCCGTCTCGCCGCCTGCCGCCTGCCCGGCCAAGTCCCCTTCAACTGGGAGACACAGCCCGGACTGCCCAAACTCCAAACCCCAGATCAAAATCTCCCGCCGGCGATCGCCCTCCCGCCGCCGGCGCCCTCCGCCGAGCACCTCCACGTAGTCCCCAAGCCGCCGCAGCAGCAGCAGGAGCCGGTTCGGGTTTGGTTCTGGAAGAAACCGAAGAGAAAGGCCGTGAGGCATAACAATAACGCCGTCCCCAAGAAAAACGGTGCGTTCGACTCATCGTCCAGACGACGAGTCGATCGCGAGAGTGATCAGTTATGTAAAAAATCAAACGACGAGTCGTCCACATCGTCTTGCATTTCTTACTCTTTATCCTCCAGCTCTTCTTCGGCCTCCTCTAATGGTTATGGCCGACGCCGCTCCAAACTCGGCCGCCTCGCCAAGGGCTTCGTAAGGTGGGCCTTC
mRNA sequence
CTTCTTCTGTCTGAGAAACCCATCTCCTTACTCCAAGAAAATGAAATTTTCGTCAACAAAATTCTCTCCAGAAACTCCTCCTTCGGCCGCTCTGCCCGTCTCGCCGCCTGCCGCCTGCCCGGCCAAGTCCCCTTCAACTGGGAGACACAGCCCGGACTGCCCAAACTCCAAACCCCAGATCAAAATCTCCCGCCGGCGATCGCCCTCCCGCCGCCGGCGCCCTCCGCCGAGCACCTCCACGTAGTCCCCAAGCCGCCGCAGCAGCAGCAGGAGCCGGTTCGGGTTTGGTTCTGGAAGAAACCGAAGAGAAAGGCCGTGAGGCATAACAATAACGCCGTCCCCAAGAAAAACGGTGCGTTCGACTCATCGTCCAGACGACGAGTCGATCGCGAGAGTGATCAGTTATGTAAAAAATCAAACGACGAGTCGTCCACATCGTCTTGCATTTCTTACTCTTTATCCTCCAGCTCTTCTTCGGCCTCCTCTAATGGTTATGGCCGACGCCGCTCCAAACTCGGCCGCCTCGCCAAGGGCTTCGTAAGGTGGGCCTTC
Coding sequence (CDS)
CTTCTTCTGTCTGAGAAACCCATCTCCTTACTCCAAGAAAATGAAATTTTCGTCAACAAAATTCTCTCCAGAAACTCCTCCTTCGGCCGCTCTGCCCGTCTCGCCGCCTGCCGCCTGCCCGGCCAAGTCCCCTTCAACTGGGAGACACAGCCCGGACTGCCCAAACTCCAAACCCCAGATCAAAATCTCCCGCCGGCGATCGCCCTCCCGCCGCCGGCGCCCTCCGCCGAGCACCTCCACGTAGTCCCCAAGCCGCCGCAGCAGCAGCAGGAGCCGGTTCGGGTTTGGTTCTGGAAGAAACCGAAGAGAAAGGCCGTGAGGCATAACAATAACGCCGTCCCCAAGAAAAACGGTGCGTTCGACTCATCGTCCAGACGACGAGTCGATCGCGAGAGTGATCAGTTATGTAAAAAATCAAACGACGAGTCGTCCACATCGTCTTGCATTTCTTACTCTTTATCCTCCAGCTCTTCTTCGGCCTCCTCTAATGGTTATGGCCGACGCCGCTCCAAACTCGGCCGCCTCGCCAAGGGCTTCGTAAGGTGGGCCTTC
Protein sequence
LLLSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNLPPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNGAFDSSSRRRVDRESDQLCKKSNDESSTSSCISYSLSSSSSSASSNGYGRRRSKLGRLAKGFVRWAF
Homology
BLAST of MC06g0430 vs. NCBI nr
Match:
KAA0058272.1 (hypothetical protein E6C27_scaffold274G005980 [Cucumis melo var. makuwa])
HSP 1 Score: 186 bits (471), Expect = 3.14e-56
Identity = 124/193 (64.25%), Postives = 139/193 (72.02%), Query Frame = 0
Query: 3 LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQN 62
LSEKP SLLQ N+ FV+KILSRNSSFGRSARL AC LPGQ+PFNWETQPGLPK Q P +
Sbjct: 11 LSEKPFSLLQANQFFVHKILSRNSSFGRSARLPACGLPGQIPFNWETQPGLPKNQ-PSET 70
Query: 63 LPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNG 122
PPA LPPP+ SA L HVVPK Q PV++WFW K +RK+ R KKNG
Sbjct: 71 PPPA-ELPPPSSSAFGLSKTPHVVPK-----QAPVKIWFWNKQRRKSRR-----AVKKNG 130
Query: 123 AFDSSS--RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSK 182
A SSS RR VDRES+ +KSNDES +SS CISYSLSS+SSSASS+ RRRSK
Sbjct: 131 ALGSSSSPRRHVDRESEFCRRKSNDESPSSSSLSCISYSLSSNSSSASSSDRYNNRRRSK 190
Query: 183 LGRLAKGFVRWAF 184
LG LAK F+RWAF
Sbjct: 191 LGSLAKEFIRWAF 191
BLAST of MC06g0430 vs. NCBI nr
Match:
KGN65459.1 (hypothetical protein Csa_020126 [Cucumis sativus])
HSP 1 Score: 185 bits (470), Expect = 4.31e-56
Identity = 121/192 (63.02%), Postives = 138/192 (71.88%), Query Frame = 0
Query: 3 LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQN 62
LSEKP SLLQ N++FV+KILSRNSSFGRSARL AC LPGQVPFNWE QPGLPK Q D
Sbjct: 11 LSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQVPFNWEAQPGLPKNQPSDN- 70
Query: 63 LPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNG 122
PP + LPPP+ SA L HVVPK Q PV++WFW K +RK+ R KK+G
Sbjct: 71 -PPPVKLPPPSSSALGLSKTPHVVPK-----QAPVKIWFWNKQRRKSRR-----AVKKSG 130
Query: 123 AFDSSS-RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKL 182
A SSS RR VDR+S+ KKSNDESS+SS CISYS+SS+SSSASS+ RRR KL
Sbjct: 131 ALGSSSPRRHVDRDSEFCRKKSNDESSSSSSLSCISYSMSSNSSSASSSDRYNNRRRYKL 190
Query: 183 GRLAKGFVRWAF 184
G LAK F+RWAF
Sbjct: 191 GSLAKEFIRWAF 190
BLAST of MC06g0430 vs. NCBI nr
Match:
TYK11824.1 (hypothetical protein E5676_scaffold152G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 183 bits (465), Expect = 2.55e-55
Identity = 123/193 (63.73%), Postives = 138/193 (71.50%), Query Frame = 0
Query: 3 LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQN 62
LSEKP SLLQ N+ FV+KILSRNSSFGRSARL AC LPGQ+PFNWETQPGLPK Q P +
Sbjct: 11 LSEKPFSLLQANQFFVHKILSRNSSFGRSARLPACGLPGQIPFNWETQPGLPKNQ-PSET 70
Query: 63 LPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNG 122
PPA LPPP+ SA L HVVPK Q PV++WFW K +RK+ R KKNG
Sbjct: 71 PPPA-ELPPPSSSAFGLSKTPHVVPK-----QAPVKIWFWNKQRRKSRR-----AVKKNG 130
Query: 123 AFDSSS--RRRVDRESDQLCKKSND---ESSTSSCISYSLSSSSSSASSNGY--GRRRSK 182
A SSS RR VDRES+ +KSND SS+ SCISYSLSS+SSSASS+ RRRSK
Sbjct: 131 ALGSSSSPRRHVDRESEFCRRKSNDGSPSSSSLSCISYSLSSNSSSASSSDRYNNRRRSK 190
Query: 183 LGRLAKGFVRWAF 184
LG LAK F+RWAF
Sbjct: 191 LGSLAKEFIRWAF 191
BLAST of MC06g0430 vs. NCBI nr
Match:
XP_022987494.1 (uncharacterized protein LOC111485037 [Cucurbita maxima])
HSP 1 Score: 172 bits (435), Expect = 7.46e-51
Identity = 114/189 (60.32%), Postives = 131/189 (69.31%), Query Frame = 0
Query: 4 SEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNL 63
SE P SLLQ NE+FV+KILSRNSS GRSARL ACRLPGQ+PF WE QPGLPK P +NL
Sbjct: 10 SENPFSLLQANELFVHKILSRNSSVGRSARLPACRLPGQIPFIWEAQPGLPK-DKPSENL 69
Query: 64 PPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNGAF--D 123
P PPP + P +QQE ++W W KP RK +R+ V KKNGAF
Sbjct: 70 HP----PPPPNYVDGTSKTPHQVPKQQEAAKIWSWMKP-RKKLRN----VVKKNGAFGSS 129
Query: 124 SSSRRRVDRESDQLCKKSNDESSTS------SCISYSLSSSSSSASSNGYGRRRSKLGRL 183
SSSR V++ES + C+KSNDESS+S SCIS+SLSSSSSS SNGY RRRSKL L
Sbjct: 130 SSSRPHVNQES-EFCRKSNDESSSSTTPSSLSCISHSLSSSSSS--SNGYARRRSKLSSL 185
BLAST of MC06g0430 vs. NCBI nr
Match:
KAG6589705.1 (Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 169 bits (428), Expect = 8.94e-47
Identity = 114/183 (62.30%), Postives = 132/183 (72.13%), Query Frame = 0
Query: 3 LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQN 62
LSE P SLLQ NE+FV+KILSRNSS GRSARL ACRLPGQ+PF WE QPGLPK P +N
Sbjct: 9 LSENPFSLLQANELFVHKILSRNSSVGRSARLPACRLPGQIPFIWEAQPGLPK-DKPSEN 68
Query: 63 LPPAIALPPPAP-SAEHLHVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNGAF- 122
L PPP+P S + P +QQE ++WFW KP RK +R+ V KKNGAF
Sbjct: 69 L-----QPPPSPNSVQGASKTPHQVPEQQEAAKIWFWMKP-RKKLRN----VVKKNGAFG 128
Query: 123 -DSSSRRRVDRESDQLCKKSNDESSTS-SCISYSLSSSSSSASSNGYGRRRSKLGRLAKG 181
SSSRR V++ES + +KSNDESS+S SCIS+SLSSSSSS SNGY RRRSKL LAKG
Sbjct: 129 SSSSSRRHVNQES-EFYRKSNDESSSSLSCISHSLSSSSSS--SNGYARRRSKLSSLAKG 177
BLAST of MC06g0430 vs. ExPASy TrEMBL
Match:
A0A5A7UQX0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005980 PE=4 SV=1)
HSP 1 Score: 186 bits (471), Expect = 1.52e-56
Identity = 124/193 (64.25%), Postives = 139/193 (72.02%), Query Frame = 0
Query: 3 LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQN 62
LSEKP SLLQ N+ FV+KILSRNSSFGRSARL AC LPGQ+PFNWETQPGLPK Q P +
Sbjct: 11 LSEKPFSLLQANQFFVHKILSRNSSFGRSARLPACGLPGQIPFNWETQPGLPKNQ-PSET 70
Query: 63 LPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNG 122
PPA LPPP+ SA L HVVPK Q PV++WFW K +RK+ R KKNG
Sbjct: 71 PPPA-ELPPPSSSAFGLSKTPHVVPK-----QAPVKIWFWNKQRRKSRR-----AVKKNG 130
Query: 123 AFDSSS--RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSK 182
A SSS RR VDRES+ +KSNDES +SS CISYSLSS+SSSASS+ RRRSK
Sbjct: 131 ALGSSSSPRRHVDRESEFCRRKSNDESPSSSSLSCISYSLSSNSSSASSSDRYNNRRRSK 190
Query: 183 LGRLAKGFVRWAF 184
LG LAK F+RWAF
Sbjct: 191 LGSLAKEFIRWAF 191
BLAST of MC06g0430 vs. ExPASy TrEMBL
Match:
A0A0A0LWV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423170 PE=4 SV=1)
HSP 1 Score: 185 bits (470), Expect = 2.09e-56
Identity = 121/192 (63.02%), Postives = 138/192 (71.88%), Query Frame = 0
Query: 3 LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQN 62
LSEKP SLLQ N++FV+KILSRNSSFGRSARL AC LPGQVPFNWE QPGLPK Q D
Sbjct: 11 LSEKPFSLLQANQLFVHKILSRNSSFGRSARLPACGLPGQVPFNWEAQPGLPKNQPSDN- 70
Query: 63 LPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNG 122
PP + LPPP+ SA L HVVPK Q PV++WFW K +RK+ R KK+G
Sbjct: 71 -PPPVKLPPPSSSALGLSKTPHVVPK-----QAPVKIWFWNKQRRKSRR-----AVKKSG 130
Query: 123 AFDSSS-RRRVDRESDQLCKKSNDESSTSS---CISYSLSSSSSSASSNGY--GRRRSKL 182
A SSS RR VDR+S+ KKSNDESS+SS CISYS+SS+SSSASS+ RRR KL
Sbjct: 131 ALGSSSPRRHVDRDSEFCRKKSNDESSSSSSLSCISYSMSSNSSSASSSDRYNNRRRYKL 190
Query: 183 GRLAKGFVRWAF 184
G LAK F+RWAF
Sbjct: 191 GSLAKEFIRWAF 190
BLAST of MC06g0430 vs. ExPASy TrEMBL
Match:
A0A5D3CKX4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00370 PE=4 SV=1)
HSP 1 Score: 183 bits (465), Expect = 1.23e-55
Identity = 123/193 (63.73%), Postives = 138/193 (71.50%), Query Frame = 0
Query: 3 LSEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQN 62
LSEKP SLLQ N+ FV+KILSRNSSFGRSARL AC LPGQ+PFNWETQPGLPK Q P +
Sbjct: 11 LSEKPFSLLQANQFFVHKILSRNSSFGRSARLPACGLPGQIPFNWETQPGLPKNQ-PSET 70
Query: 63 LPPAIALPPPAPSAEHL----HVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNG 122
PPA LPPP+ SA L HVVPK Q PV++WFW K +RK+ R KKNG
Sbjct: 71 PPPA-ELPPPSSSAFGLSKTPHVVPK-----QAPVKIWFWNKQRRKSRR-----AVKKNG 130
Query: 123 AFDSSS--RRRVDRESDQLCKKSND---ESSTSSCISYSLSSSSSSASSNGY--GRRRSK 182
A SSS RR VDRES+ +KSND SS+ SCISYSLSS+SSSASS+ RRRSK
Sbjct: 131 ALGSSSSPRRHVDRESEFCRRKSNDGSPSSSSLSCISYSLSSNSSSASSSDRYNNRRRSK 190
Query: 183 LGRLAKGFVRWAF 184
LG LAK F+RWAF
Sbjct: 191 LGSLAKEFIRWAF 191
BLAST of MC06g0430 vs. ExPASy TrEMBL
Match:
A0A6J1JJ17 (uncharacterized protein LOC111485037 OS=Cucurbita maxima OX=3661 GN=LOC111485037 PE=4 SV=1)
HSP 1 Score: 172 bits (435), Expect = 3.61e-51
Identity = 114/189 (60.32%), Postives = 131/189 (69.31%), Query Frame = 0
Query: 4 SEKPISLLQENEIFVNKILSRNSSFGRSARLAACRLPGQVPFNWETQPGLPKLQTPDQNL 63
SE P SLLQ NE+FV+KILSRNSS GRSARL ACRLPGQ+PF WE QPGLPK P +NL
Sbjct: 10 SENPFSLLQANELFVHKILSRNSSVGRSARLPACRLPGQIPFIWEAQPGLPK-DKPSENL 69
Query: 64 PPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPKRKAVRHNNNAVPKKNGAF--D 123
P PPP + P +QQE ++W W KP RK +R+ V KKNGAF
Sbjct: 70 HP----PPPPNYVDGTSKTPHQVPKQQEAAKIWSWMKP-RKKLRN----VVKKNGAFGSS 129
Query: 124 SSSRRRVDRESDQLCKKSNDESSTS------SCISYSLSSSSSSASSNGYGRRRSKLGRL 183
SSSR V++ES + C+KSNDESS+S SCIS+SLSSSSSS SNGY RRRSKL L
Sbjct: 130 SSSRPHVNQES-EFCRKSNDESSSSTTPSSLSCISHSLSSSSSS--SNGYARRRSKLSSL 185
BLAST of MC06g0430 vs. ExPASy TrEMBL
Match:
A0A6J5TFB4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS1471 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 4.64e-21
Identity = 86/210 (40.95%), Postives = 112/210 (53.33%), Query Frame = 0
Query: 6 KPISLLQENEIFVNKILSRNSSFGRSA-RLAACRLPGQVPFNWETQPGLPKLQTPD---- 65
K +++ NE+F NKILSRNSS G S+ R R+ G VPF WE +PG PKL+ D
Sbjct: 12 KTLAIFPANEVFYNKILSRNSSVGSSSSRSYFGRVTGSVPFQWEAKPGKPKLEAHDEEQQ 71
Query: 66 --QNL-----PPAIALPPPAPSAEHLHVVPKPPQQQQEPVRVWFWKKPK------RKAVR 125
QN PP I PPPA + +++ +P RVW WKK K RK +
Sbjct: 72 QHQNFDFVQNPPLIIGPPPATQSLNMNSLPYSSGPFSNS-RVWLWKKLKKTHKLKRKLKK 131
Query: 126 HNNNAVPKKNGAFDSSSRRRVDRESDQLCKKSND-------ESSTSSCISYSLSS----- 184
N N V G FD + ++ ++D LCK + SSTSSC S SLSS
Sbjct: 132 INKNNVE---GNFDVAGLDQLYHQAD-LCKSDEEIMKFGSYGSSTSSCNSSSLSSTASAS 191
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0058272.1 | 3.14e-56 | 64.25 | hypothetical protein E6C27_scaffold274G005980 [Cucumis melo var. makuwa] | [more] |
KGN65459.1 | 4.31e-56 | 63.02 | hypothetical protein Csa_020126 [Cucumis sativus] | [more] |
TYK11824.1 | 2.55e-55 | 63.73 | hypothetical protein E5676_scaffold152G00370 [Cucumis melo var. makuwa] | [more] |
XP_022987494.1 | 7.46e-51 | 60.32 | uncharacterized protein LOC111485037 [Cucurbita maxima] | [more] |
KAG6589705.1 | 8.94e-47 | 62.30 | Replication protein A 32 kDa subunit B, partial [Cucurbita argyrosperma subsp. s... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UQX0 | 1.52e-56 | 64.25 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0LWV3 | 2.09e-56 | 63.02 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423170 PE=4 SV=1 | [more] |
A0A5D3CKX4 | 1.23e-55 | 63.73 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1JJ17 | 3.61e-51 | 60.32 | uncharacterized protein LOC111485037 OS=Cucurbita maxima OX=3661 GN=LOC111485037... | [more] |
A0A6J5TFB4 | 4.64e-21 | 40.95 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS1471 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |