MC06g0135 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC06g0135
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	NHL domain protein
Location	MC06: 1106435 .. 1106893 (+)
RNA-Seq Expression	MC06g0135
Synteny	MC06g0135

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCGTACCGATGCAGAGGAGCCGCCTTGTGAAGCAGATAAAACCAATGCTCTCTTGCCGACCACCAGCTGCGGCTGCTTCCGTGTTTCGTGCTTCGGATCTCGCCGTCCGGCCGCCGCCGGGCCGTCCTGGTGGGAGCGGATTCGGGCGTCGCAGGTTCACGGCGAGGGGCGGTGGTGGACGCGAGGCGTCAGAGTTCTCTTGAAGCTCCGTGAGTGGTCGGAGATTGTCGCTGGGCCGAGATGGAAGACTTTCATCCGCCGATTTAATCGCAATCGGAGTTCTGGTGCTACTAGGCCTGGGAAATTCCAGTACGATCCGTTGAGTTACGCCATGAATTTCGACGAGGGTTCGAGGGAGATTGGGGAATTGGACGACGACATCGATGACTTCAATGGCTTCCGGAATTTCTCCTCTCGGTACGCTTCGATTCCGGCGCCGATGAAGTCCGGAGGA

mRNA sequence

ATGACCCGTACCGATGCAGAGGAGCCGCCTTGTGAAGCAGATAAAACCAATGCTCTCTTGCCGACCACCAGCTGCGGCTGCTTCCGTGTTTCGTGCTTCGGATCTCGCCGTCCGGCCGCCGCCGGGCCGTCCTGGTGGGAGCGGATTCGGGCGTCGCAGGTTCACGGCGAGGGGCGGTGGTGGACGCGAGGCGTCAGAGTTCTCTTGAAGCTCCGTGAGTGGTCGGAGATTGTCGCTGGGCCGAGATGGAAGACTTTCATCCGCCGATTTAATCGCAATCGGAGTTCTGGTGCTACTAGGCCTGGGAAATTCCAGTACGATCCGTTGAGTTACGCCATGAATTTCGACGAGGGTTCGAGGGAGATTGGGGAATTGGACGACGACATCGATGACTTCAATGGCTTCCGGAATTTCTCCTCTCGGTACGCTTCGATTCCGGCGCCGATGAAGTCCGGAGGA

Coding sequence (CDS)

ATGACCCGTACCGATGCAGAGGAGCCGCCTTGTGAAGCAGATAAAACCAATGCTCTCTTGCCGACCACCAGCTGCGGCTGCTTCCGTGTTTCGTGCTTCGGATCTCGCCGTCCGGCCGCCGCCGGGCCGTCCTGGTGGGAGCGGATTCGGGCGTCGCAGGTTCACGGCGAGGGGCGGTGGTGGACGCGAGGCGTCAGAGTTCTCTTGAAGCTCCGTGAGTGGTCGGAGATTGTCGCTGGGCCGAGATGGAAGACTTTCATCCGCCGATTTAATCGCAATCGGAGTTCTGGTGCTACTAGGCCTGGGAAATTCCAGTACGATCCGTTGAGTTACGCCATGAATTTCGACGAGGGTTCGAGGGAGATTGGGGAATTGGACGACGACATCGATGACTTCAATGGCTTCCGGAATTTCTCCTCTCGGTACGCTTCGATTCCGGCGCCGATGAAGTCCGGAGGA

Protein sequence

MTRTDAEEPPCEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSSGATRPGKFQYDPLSYAMNFDEGSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG

Homology

[Close]

BLAST of MC06g0135 vs. NCBI nr
Match: XP_038878924.1 (uncharacterized protein LOC120071012 [Benincasa hispida])

HSP 1 Score: 272 bits (695), Expect = 3.53e-91
Identity = 129/157 (82.17%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MTRTDAEEP-PCEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGR 60
           M  TD EE  PCEADK+N+LLPT  CGCFR+SCFGSRR A  GPSWWER+RASQVH EGR
Sbjct: 1   MAFTDVEEESPCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERLRASQVHSEGR 60

Query: 61  WWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSSGA---TRPGKFQYDPLSYAMNFD 120
           WW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS G     R GKFQYDPLSYAMNFD
Sbjct: 61  WWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGGVRAGKFQYDPLSYAMNFD 120

Query: 121 EGSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           EGSR+IGELDDDIDDFNG+RNFS+RYASIPAP+K+GG
Sbjct: 121 EGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGG 157

[Close]

BLAST of MC06g0135 vs. NCBI nr
Match: KAG6587481.1 (hypothetical protein SDJN03_16046, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270 bits (691), Expect = 1.44e-90
Identity = 127/155 (81.94%), Postives = 137/155 (88.39%), Query Frame = 0


Query: 1   MTRTDAEEPPCEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGRW 60
           M    AEEPPCEADK+N+LLPTTSCGC R+SCFGSRR  A GPSWWERIRAS+VH EGRW
Sbjct: 1   MAYAHAEEPPCEADKSNSLLPTTSCGCSRLSCFGSRRTTAGGPSWWERIRASEVHNEGRW 60

Query: 61  WTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--SGATRPGKFQYDPLSYAMNFDEG 120
           W RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS  + A RPGKFQYDPLSYAMNFDEG
Sbjct: 61  WARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDEG 120

Query: 121 SREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           S +IGELDDDIDDF+GFRNFS+RYASIP  +K+ G
Sbjct: 121 SGQIGELDDDIDDFSGFRNFSARYASIPGSLKTAG 155

[Close]

BLAST of MC06g0135 vs. NCBI nr
Match: XP_011657987.1 (uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical protein Csa_013668 [Cucumis sativus])

HSP 1 Score: 269 bits (687), Expect = 7.69e-90
Identity = 130/167 (77.84%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 1   MTRTDAEE--PPCEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEG 60
           M  TD EE  P C+ADK+N+LLPT  CGCFR+SCFGSRR A  GPSWWERIRASQVH EG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSSGA------------TRPGKFQY 120
           RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS G              R GKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           DPLSYAMNFDEGSR+IGELDDDIDDFNG+RNFS+RYASIPAP+K+GG
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGG 167

[Close]

BLAST of MC06g0135 vs. NCBI nr
Match: XP_022928159.1 (uncharacterized protein LOC111435061 [Cucurbita moschata] >XP_023530985.1 uncharacterized protein LOC111793374 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 267 bits (683), Expect = 2.47e-89
Identity = 128/156 (82.05%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 1   MTRTDAEEPP-CEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGR 60
           M    AEEPP CEADK+N+LLPTTSCGC R+SCFGSRR AA GPSWWERIRAS+VH EGR
Sbjct: 1   MAYAHAEEPPSCEADKSNSLLPTTSCGCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGR 60

Query: 61  WWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--SGATRPGKFQYDPLSYAMNFDE 120
           WW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS  + A RPGKFQYDPLSYAMNFDE
Sbjct: 61  WWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDE 120

Query: 121 GSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           GS +IGELDDDIDDF+GFRNFS+RYASIP  +K+ G
Sbjct: 121 GSGQIGELDDDIDDFSGFRNFSARYASIPGSLKTAG 156

[Close]

BLAST of MC06g0135 vs. NCBI nr
Match: XP_023003975.1 (uncharacterized protein LOC111497423 [Cucurbita maxima])

HSP 1 Score: 267 bits (683), Expect = 2.47e-89
Identity = 128/156 (82.05%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 1   MTRTDAEEPP-CEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGR 60
           M    AEEPP CEADK+N+LLPTTSC C R+SCFGSRR AA GPSWWERIRAS+VH EGR
Sbjct: 1   MAYAHAEEPPSCEADKSNSLLPTTSCSCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGR 60

Query: 61  WWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--SGATRPGKFQYDPLSYAMNFDE 120
           WW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS  + A RPGKFQYDPLSYAMNFDE
Sbjct: 61  WWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDE 120

Query: 121 GSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           GS +IGELDDDIDDF+GFRNFS+RYASIP  +K+GG
Sbjct: 121 GSGQIGELDDDIDDFSGFRNFSARYASIPGSLKTGG 156

[Close]

BLAST of MC06g0135 vs. ExPASy TrEMBL
Match: A0A0A0LUB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1)

HSP 1 Score: 269 bits (687), Expect = 3.72e-90
Identity = 130/167 (77.84%), Postives = 139/167 (83.23%), Query Frame = 0


Query: 1   MTRTDAEE--PPCEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEG 60
           M  TD EE  P C+ADK+N+LLPT  CGCFR+SCFGSRR A  GPSWWERIRASQVH EG
Sbjct: 1   MAFTDVEEESPCCDADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEG 60

Query: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSSGA------------TRPGKFQY 120
           RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS G              R GKFQY
Sbjct: 61  RWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGCGSGGGGGSGVRAGKFQY 120

Query: 121 DPLSYAMNFDEGSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           DPLSYAMNFDEGSR+IGELDDDIDDFNG+RNFS+RYASIPAP+K+GG
Sbjct: 121 DPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGG 167

[Close]

BLAST of MC06g0135 vs. ExPASy TrEMBL
Match: A0A6J1KTA4 (uncharacterized protein LOC111497423 OS=Cucurbita maxima OX=3661 GN=LOC111497423 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 1.19e-89
Identity = 128/156 (82.05%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 1   MTRTDAEEPP-CEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGR 60
           M    AEEPP CEADK+N+LLPTTSC C R+SCFGSRR AA GPSWWERIRAS+VH EGR
Sbjct: 1   MAYAHAEEPPSCEADKSNSLLPTTSCSCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGR 60

Query: 61  WWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--SGATRPGKFQYDPLSYAMNFDE 120
           WW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS  + A RPGKFQYDPLSYAMNFDE
Sbjct: 61  WWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDE 120

Query: 121 GSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           GS +IGELDDDIDDF+GFRNFS+RYASIP  +K+GG
Sbjct: 121 GSGQIGELDDDIDDFSGFRNFSARYASIPGSLKTGG 156

[Close]

BLAST of MC06g0135 vs. ExPASy TrEMBL
Match: A0A6J1EK25 (uncharacterized protein LOC111435061 OS=Cucurbita moschata OX=3662 GN=LOC111435061 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 1.19e-89
Identity = 128/156 (82.05%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 1   MTRTDAEEPP-CEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGR 60
           M    AEEPP CEADK+N+LLPTTSCGC R+SCFGSRR AA GPSWWERIRAS+VH EGR
Sbjct: 1   MAYAHAEEPPSCEADKSNSLLPTTSCGCSRLSCFGSRRTAAGGPSWWERIRASEVHNEGR 60

Query: 61  WWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--SGATRPGKFQYDPLSYAMNFDE 120
           WW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS  + A RPGKFQYDPLSYAMNFDE
Sbjct: 61  WWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGATAAARPGKFQYDPLSYAMNFDE 120

Query: 121 GSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           GS +IGELDDDIDDF+GFRNFS+RYASIP  +K+ G
Sbjct: 121 GSGQIGELDDDIDDFSGFRNFSARYASIPGSLKTAG 156

[Close]

BLAST of MC06g0135 vs. ExPASy TrEMBL
Match: A0A6J1E188 (uncharacterized protein LOC111429865 OS=Cucurbita moschata OX=3662 GN=LOC111429865 PE=4 SV=1)

HSP 1 Score: 266 bits (679), Expect = 4.54e-89
Identity = 125/156 (80.13%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   MTRTDAEEPP-CEADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGR 60
           M   DAEEPP CE D +N+LLPTT CGCFR+SC   RR  A GPSWWERIRASQVH EGR
Sbjct: 1   MAYPDAEEPPPCEVDNSNSLLPTTRCGCFRLSCLEFRRAVAVGPSWWERIRASQVHSEGR 60

Query: 61  WWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--SGATRPGKFQYDPLSYAMNFDE 120
           WW RGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+  +GA RPGKFQYDPLSYAMNFDE
Sbjct: 61  WWARGVRVILKIREWSEIVAGPRWKTFIRRFNRNRNGGAGAGRPGKFQYDPLSYAMNFDE 120

Query: 121 GSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           GSR+IGELDDD DDFNG+RNFS+RYASIPAP+K+GG
Sbjct: 121 GSRQIGELDDDNDDFNGYRNFSARYASIPAPLKTGG 156

[Close]

BLAST of MC06g0135 vs. ExPASy TrEMBL
Match: A0A5D3BK38 (Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001870 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 8.18e-89
Identity = 126/163 (77.30%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MTRTDAEEPPC-EADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGR 60
            T  D EE PC EADK+N+LLPT  CGCFR+SCFGSRR A  GPSWWERIRASQVH EGR
Sbjct: 3   FTDVDQEESPCCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHSEGR 62

Query: 61  WWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSSGA---------TRPGKFQYDPLS 120
           WW RGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS G           R GKFQYDPLS
Sbjct: 63  WWARGVKVILKLREWSEIVAGPRWKTFIRRFNRNRSGGCGGGGGGGSGVRAGKFQYDPLS 122

Query: 121 YAMNFDEGSREIGELDDDIDDFNGFRNFSSRYASIPAPMKSGG 153
           YAMNFDEGSR+IGELDDD+DDFNG+RNFS+RYASIPAP+K+GG
Sbjct: 123 YAMNFDEGSRQIGELDDDMDDFNGYRNFSARYASIPAPLKTGG 165

[Close]

BLAST of MC06g0135 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 63/137 (45.99%), Postives = 79/137 (57.66%), Query Frame = 0


Query: 12  EADKTNALLPTTSCGCFRVSCFGSRRPAAAGPSWWERIRASQVHGEGRWWTRGVRVLLKL 71
           E  + N LL  +SC    V             SWW+RI  +  H E RWW   VR  LK+
Sbjct: 2   EVGQANPLLGESSCCSTTVK-----------SSWWQRIHRNN-HQEPRWW---VRAFLKI 61

Query: 72  REWSEIVAGPRWKTFIRRFNRN--RSSGATRPGKFQYDPLSYAMNFDEGSREIGELDDDI 131
           REWSEIVAGPRWKTFIRRFNR+  R        KF+YDP+SY ++F++  ++    DDD 
Sbjct: 62  REWSEIVAGPRWKTFIRRFNRDPRRGQDWDDSDKFRYDPVSYTLSFEDEDKD----DDDE 119

Query: 132 DDFNGFRNFSSRYASIP 147
               G R+FS RYAS+P
Sbjct: 122 AGVGGVRSFSMRYASVP 119

[Close]

BLAST of MC06g0135 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-24
Identity = 67/131 (51.15%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 25  CGCFRVSCFGSRRPAAAGPSWWERIRA------SQVHG-EGRWWTRGVRVLLKLREWSEI 84
           C CF  S   SR   A G S W RIR       S  HG E RWW   +R  LK+REWSEI
Sbjct: 20  CCCF-PSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWW---IRASLKIREWSEI 79

Query: 85  VAGPRWKTFIRRFNRNRSSGA--TRPGKFQYDPLSYAMNFDEGSREIGELDDDIDDFNGF 144
           VAGPRWKTFIRRFNR+   G       KFQYDPLSY++NFD+   E     D+     G 
Sbjct: 80  VAGPRWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDDDDEE-----DEYVGLGGL 139

Query: 145 RNFSSRYASIP 147
           R+FS+R+AS+P
Sbjct: 140 RSFSTRFASVP 141

[Close]

BLAST of MC06g0135 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23
Identity = 62/157 (39.49%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 9   PPCEADKTN----ALLPTTSCGCFRVSCFGSRRPAAA-GPSWWERIR-ASQVHGEGRWWT 68
           P  E D T+    A+     C CF + C GS +P+   G  WW+RIR   ++  + RWW 
Sbjct: 590 PISEMDATDEMHEAMFAKRGC-CFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWV 649

Query: 69  RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR------SSGATRPG--KFQYDPLSYAMN 128
            G    +K+REWSEIVAGP+WKTFIRRF RN         G  RP    F+YD  SY++N
Sbjct: 650 SG---WMKMREWSEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLN 709

Query: 129 FDEGSREIGELDDDIDDFNGFRNFSSRYASIPAPMKS 152
           FD+G ++ G  +D+      +R++S R+A+   P+ +
Sbjct: 710 FDDG-KQTGHFEDEFP----YRDYSMRFAAPSLPVST 737

[Close]

BLAST of MC06g0135 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-23
Identity = 63/170 (37.06%), Postives = 92/170 (54.12%), Query Frame = 0


Query: 9   PPCEADKTN----ALLPTTSCGCFRVSCFGSRRPAAAGPS-WWERI-RASQVHGEGRWWT 68
           P  E D T+    AL     C CF + C  S +P+  G S WW+RI    ++  + RWW 
Sbjct: 7   PIAEVDATDDMHEALFAKRGC-CFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERWWI 66

Query: 69  RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSSG---------------------ATRP 128
           RG R   ++REWSE+VAGPRWKT+IRRF R+   G                     ++  
Sbjct: 67  RGWR---RMREWSELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSSDQ 126

Query: 129 GKFQYDPLSYAMNFDEGSREIGELDDDIDDFNGFRNFSSRYASIPAPMKS 152
           GKF+YD LSY++NFD+G+ + G  DD+      +R++S R+A+   P+ +
Sbjct: 127 GKFRYDQLSYSLNFDDGN-QTGHFDDEFP----YRDYSMRFAAPSLPVST 167

[Close]

BLAST of MC06g0135 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 28/66 (42.42%), Postives = 36/66 (54.55%), Query Frame = 0


Query: 53  QVHGEGRWWTRGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSSGATRPGKFQYDPLSYA 112
           Q    G W   G   L  L+E SE +AGP+WK FIR F+  R     R   F YD  +Y+
Sbjct: 51  QEERRGNW---GSEKLKGLKEISEKIAGPKWKNFIRSFSSGRKK-MRRDVDFTYDLKNYS 110

Query: 113 MNFDEG 119
           +NFD+G
Sbjct: 111 LNFDDG 112

The following BLAST results are available for this feature:

BLAST of MC06g0135 vs.


Match Name	E-value	Identity	Description

BLAST of MC06g0135 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878924.1	3.53e-91	82.17	uncharacterized protein LOC120071012 [Benincasa hispida]	[more]
KAG6587481.1	1.44e-90	81.94	hypothetical protein SDJN03_16046, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_011657987.1	7.69e-90	77.84	uncharacterized protein LOC105435925 [Cucumis sativus] >KGN63596.1 hypothetical ...	[more]
XP_022928159.1	2.47e-89	82.05	uncharacterized protein LOC111435061 [Cucurbita moschata] >XP_023530985.1 unchar...	[more]
XP_023003975.1	2.47e-89	82.05	uncharacterized protein LOC111497423 [Cucurbita maxima]	[more]

BLAST of MC06g0135 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUB2	3.72e-90	77.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005570 PE=4 SV=1	[more]
A0A6J1KTA4	1.19e-89	82.05	uncharacterized protein LOC111497423 OS=Cucurbita maxima OX=3661 GN=LOC111497423...	[more]
A0A6J1EK25	1.19e-89	82.05	uncharacterized protein LOC111435061 OS=Cucurbita moschata OX=3662 GN=LOC1114350...	[more]
A0A6J1E188	4.54e-89	80.13	uncharacterized protein LOC111429865 OS=Cucurbita moschata OX=3662 GN=LOC1114298...	[more]
A0A5D3BK38	8.18e-89	77.30	Putative Serine/arginine repetitive matrix protein 2 OS=Cucumis melo var. makuwa...	[more]

BLAST of MC06g0135 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48020.1	1.2e-24	45.99	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G62865.1	2.0e-24	51.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G14890.1	2.2e-23	39.49	NHL domain-containing protein	[more]
AT3G01430.1	2.9e-23	37.06	BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:...	[more]
AT5G25240.1	1.1e-06	42.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR47076	NHL DOMAIN PROTEIN	coord: 9..149
None	No IPR available	PANTHER	PTHR47076:SF9	BNAA06G16930D PROTEIN	coord: 9..149
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..27 score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC06g0135.1	MC06g0135.1	mRNA