Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTACGGCCGGAGGCGGTGGCCCTGCCTTCTACTCCGTCGCAACCGCCGCCAGTCCACCGGCGACGTCGTTCACTTCATTCTCTCCGTCCATTCTCTTGTCTTCAAGAAGAATCGGAGAGAGATACATAGGCAGCGAAAGAAACGAAAATCGATCTCGAGATCTCGAAGATCAGTCACAGTTGGAGGCAGCAGTCGGAAGAAGCAAGTAAAATCTACAATTCGAAAGCAAAATCAAACGAACAGACAGATCTATATATACCTCGAATTTGGAAATAGGTGAAAAATCGCGGTCCGATTGCGATTGCGATTGCGATTAAGAGCGATCAGATGTAGATGTGAAGCTGAACGACGAAGGTGAAGAGGCAGAGGAGGGCGAAGAAGATGAGAGAATGGATGAAAATGGAGGCACCGCTGGTATGGAAGTTGCCGAACTCGACGAATTGATGGTGGCCGGGGACCTGGAAGAGAAGGCCGGGAGATAG mRNA sequence ATGTACGGCCGGAGGCGGTGGCCCTGCCTTCTACTCCGTCGCAACCGCCGCCAGTCCACCGGCGACGTCGTTCACTTCATTCTCTCCGTCCATTCTCTTGTCTTCAAGAAGAATCGGAGAGAGATACATAGGCAGCGAAAGAAACGAAAATCGATCTCGAGATCTCGAAGATCAGTCACAGTTGGAGGCAGCAAGCGATCAGATGTAGATGTGAAGCTGAACGACGAAGGTGAAGAGGCAGAGGAGGGCGAAGAAGATGAGAGAATGGATGAAAATGGAGGCACCGCTGGTATGGAAGTTGCCGAACTCGACGAATTGATGGTGGCCGGGGACCTGGAAGAGAAGGCCGGGAGATAG Coding sequence (CDS) ATGTACGGCCGGAGGCGGTGGCCCTGCCTTCTACTCCGTCGCAACCGCCGCCAGTCCACCGGCGACGTCGTTCACTTCATTCTCTCCGTCCATTCTCTTGTCTTCAAGAAGAATCGGAGAGAGATACATAGGCAGCGAAAGAAACGAAAATCGATCTCGAGATCTCGAAGATCAGTCACAGTTGGAGGCAGCAAGCGATCAGATGTAGATGTGAAGCTGAACGACGAAGGTGAAGAGGCAGAGGAGGGCGAAGAAGATGAGAGAATGGATGAAAATGGAGGCACCGCTGGTATGGAAGTTGCCGAACTCGACGAATTGATGGTGGCCGGGGACCTGGAAGAGAAGGCCGGGAGATAG Protein sequence MYGRRRWPCLLLRRNRRQSTGDVVHFILSVHSLVFKKNRREIHRQRKKRKSISRSRRSVTVGGSKRSDVDVKLNDEGEEAEEGEEDERMDENGGTAGMEVAELDELMVAGDLEEKAGR
Homology
BLAST of MC05g_new0129 vs. NCBI nr
Match: KAG0476768.1 (hypothetical protein HPP92_013609 [Vanilla planifolia]) HSP 1 Score: 47.0 bits (110), Expect = 8.68e-04 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0 Query: 59 VTVGGSKRSDVDVKLNDEGEEAEEGEEDERMDENGGTAGMEVAELDELMVAGDLEEKA 116 + VG S+ + VDV + E E+ +EGE DER+DE+G AG+ + EL + + AGDL ++A Sbjct: 12 LIVGRSRLTSVDVDADGEEEDGDEGEVDERVDEDGDAAGLHIRELRKSVPAGDLNDEA 69
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG0476768.1 | 8.68e-04 | 44.83 | hypothetical protein HPP92_013609 [Vanilla planifolia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 41..98 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 41..55 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 74..89 |
Relationships
The following mRNA feature(s) are a part of this gene:
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