Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGCGGTTATGTAAGCCGTTACAAAAGCAGCAAAGAAAAAATAGAGGTGGGTGGCAGCCATTTTTACCGGCAGAGGAAGAAAGAAAAACGATATCTTGGCTTGTAGAGCTTTGTCGACAGTCTGTTCTCGCGATTCTTTTGTGAGATTTTTCATTCTGTATCCCTAAGTAACTATTTTTGTAGTGCTTAGAAGCTAGGTGGCTATTGTTATAGCATCTAGAGAGCATTTTAATGAAAATGAAGCTCATTGTAATCTTCCCATTACAGTGGAACCTGCATATTGCAGAAGACTGGACGTAGCTCCAAGCTTGGAGTGAACCATTATATTTTTCTGGTGTTTGTTTTCTATCCCTATCTCGTATTTCCTTTATTGCATTGATAAAATTGTGACTTGCTCGTAACTGTGGATGAAGAAAAATACTAGTTAGTTCCTACTAGATTGCTCTTGGTTGAGAACTAGAGATATTTTATTGTTATTGCATATATATATTTTTTCTCAACAATTGGTATCAGAGCTTTTGGTTCAAAGTCATGGGAATTGGTGAGCAGTCAAATTTCGAAGGGATTATGAGGTTAGATGGAGCCAACTTTGGTTATTGGAAAATGCAGATTAATGATTACTTAACCTGCAAAAAGGTGCACAAAGCGTTGAAGGAACGACCAGATAGAATGAAGCTTGAAGATTGGGAAGATATGGATGAACAGGCAGTTGCAATTATCAGGTTGGGTCTATCAATGACTGTAGCGAGTCTTGTGGCAAATGAGACACGGCGATAAGTCTGATAAATGCACTGATGAACAGGTATAAAAAACCCTCTGCCAATAATAAAGTATATCTTGTTAGAAGATATTTTAACATTCGTATGGATGAGAATGCTTCTGTTAATTCCCATATAAATGAAGTCACTAATTTAATCAATCAATTAGCATCTCTTAAGATTACATTTAGTGATGAGGTGAATGCTATTTTATTGTTGACTTCTTTGTCTGAAAGTTGGGAAACGATGAAGACGGCTGTGTCTAATTTGTTAGGAGATAAGAGTTTAAAATTTACAGAAATTTGTGATGTTACAATTGCTGAAGAAATTCGTAGGAAAGAGAGTGGAAAAGAATCTACTTCTAGTTCTGCATCTGGCTCAGCATTGATTGTTCATAAAGGTAAAGAAAAATTTGATTATGATGATAGACAATATAAAAATAGCAGGAGGAATGAGAATGGAGAAATCGAATGTTATTACTGCCACAAGAAGGGCCACTATAAGAGGCACCGTAGAAAATTTAAAGAGGATCTGAAAAAGCTAGATGCAAATGCAAATGTAGTTGTGCATGATGTTCTTGTTTGTGTTGAGAGTAACATAATGTCGGTGGACCAGTCATCAGAATGGGTAGTAGACAATGCAGCTTCAGTACACATCTCTTCAGATAGGAGATTGTTCACATCTTTTACTGTAGACAACTATGGCATGGTGAGGATGAGAAATGGTAGGCTCTCCAAGACCAGAGGAATTGGAGATATCAATCTGAAGATCGAAAGTGGGACTGAGTTGGTTCTGCGAGATGTCAGGTACGTACCAACATCAGAATGAATTTAATATCTGCAGGGAAGTTGGATGACGATGGTTACAGAAGTTAGTTTGCTGGAAATATGTGGAAACTCACTAGAGGATTCGAGTTGGTGGTTGTTGGCCACAGGACATATACAGTGTACACAGTATGGTTTGATGTTGCCAAAGGATCAGAGAGACAGATGATGCACAGAGTTGCAGATTGTTTAGATGAAGATAGGAAAGAACCAGCAGCATTGACAACCTGGATAGATCCATCAGTTCAAGTTCAACAATTGGGAGGTCAGAGAAAGAAAAATAGTTCAGTTGGTTGTTAGGTAATAGCCCCAGTTGTCAGACGGTTCAACGAATTGATGAAGTCGCATAGACGAAAAGATGCATCGAAGAATAAGATCACAGTTGGTGCTGAGGTCGAGCTTGAAGTCTCTAGCTTGGTAACAGACTGGAGTGGGAGTGTCAAGTCATCGAAGAAGAATTCTTTCTTTGAGAGTCATTGGTTATGATCGAAGAAGGAAGCGTTGGGAGGTACCACTTAGTTCGAGTGGGAGCACGTGGCTGTGTCTTTTATGTCTGGAAGACAAAACCACGTAGGTTGCCCAGTCTAAAGGCAAGTACAGATGGAACCTTAGTTGTTTGGCAAGATGATCCGATGATGTTGTTGCAGTGGGAGGCAACATTGATGTTTTGTCTTCAAGTGAGAGATTGTTGGGAAACGTGGAGACAAAAAAAAAGAGAAAGAAAGGGATTAATGGTTGTTGGGCCAAGTAAAAACATAAAGCCCGACTTTAGTTTTCCTCCTCTATTAAGTTTCCTTTTCTTCTTTACATATATATGTGAGCCGTTACAGAAGCAAAAAAAATAGAGGCTGGTGGCGGCCATTTTTACCGGCGGAGGAAGATAGGAAAACGAGATCTTGGCATGTAGAGCGTCGTCAGCAATCCGTTCTCGCGATTCTTGTGAGGTTTTTCATTCTATAGCCCTAAGTAACTATTGTTGTAGTACTTAGAAACAAGATGACTATTGTTGTAGCATCTAGAGAGCATTTTAGTGGAAGTGAGGCCTATTGTAATCTTCCCATTATAGTGGAACCTGCATATTGCAGAAGATTGGACGTAGCTCCGAGCTTTGAGTGAATCAGTATATTTTTCTGGTGTTTATTTTCTATCCCTATCTCGTATTTTCTTTATTGCATTGATAAAACTGTGACTTGCTCATAACTGTGAAAGGGGAAAAATACTAGTTAGATTTGGAT
mRNA sequence
ATGAACAGGTATAAAAAACCCTCTGCCAATAATAAAGTATATCTTGTTAGAAGATATTTTAACATTCGTATGGATGAGAATGCTTCTGTTAATTCCCATATAAATGAAGTCACTAATTTAATCAATCAATTAGCATCTCTTAAGATTACATTTAGTGATGAGGTGAATGCTATTTTATTGTTGACTTCTTTGTCTGAAAGTTGGGAAACGATGAAGACGGCTGTGTCTAATTTGTTAGGAGATAAGAGTTTAAAATTTACAGAAATTTGTGATGTTACAATTGCTGAAGAAATTCGTAGGAAAGAGAGTGGAAAAGAATCTACTTCTAGTTCTGCATCTGGCTCAGCATTGATTGTTCATAAAGGTAAAGAAAAATTTGATTATGATGATAGACAATATAAAAATAGCAGGAGGAATGAGAATGGAGAAATCGAATGTTATTACTGCCACAAGAAGGGCCACTATAAGAGGCACCGTAGAAAATTTAAAGAGGATCTGAAAAAGCTAGATGCAAATGCAAATGTAGTTGTGCATGATGTTCTTGTTTGTGTTGAGAGTAACATAATGTCGGTGGACCAGTCATCAGAATGGGTAGTAGACAATGCAGCTTCAGTACACATCTCTTCAGATAGGAGATTGTTCACATCTTTTACTGTAGACAACTATGGCATGGTGAGGATGAGAAATGGTAGGCTCTCCAAGACCAGAGGAATTGGAGATATCAATCTGAAGATCGAAAGTGGGACTGAGTTGGTTCTGCGAGATGTCAGGTACGTACCAACATCAGAATGA
Coding sequence (CDS)
ATGAACAGGTATAAAAAACCCTCTGCCAATAATAAAGTATATCTTGTTAGAAGATATTTTAACATTCGTATGGATGAGAATGCTTCTGTTAATTCCCATATAAATGAAGTCACTAATTTAATCAATCAATTAGCATCTCTTAAGATTACATTTAGTGATGAGGTGAATGCTATTTTATTGTTGACTTCTTTGTCTGAAAGTTGGGAAACGATGAAGACGGCTGTGTCTAATTTGTTAGGAGATAAGAGTTTAAAATTTACAGAAATTTGTGATGTTACAATTGCTGAAGAAATTCGTAGGAAAGAGAGTGGAAAAGAATCTACTTCTAGTTCTGCATCTGGCTCAGCATTGATTGTTCATAAAGGTAAAGAAAAATTTGATTATGATGATAGACAATATAAAAATAGCAGGAGGAATGAGAATGGAGAAATCGAATGTTATTACTGCCACAAGAAGGGCCACTATAAGAGGCACCGTAGAAAATTTAAAGAGGATCTGAAAAAGCTAGATGCAAATGCAAATGTAGTTGTGCATGATGTTCTTGTTTGTGTTGAGAGTAACATAATGTCGGTGGACCAGTCATCAGAATGGGTAGTAGACAATGCAGCTTCAGTACACATCTCTTCAGATAGGAGATTGTTCACATCTTTTACTGTAGACAACTATGGCATGGTGAGGATGAGAAATGGTAGGCTCTCCAAGACCAGAGGAATTGGAGATATCAATCTGAAGATCGAAAGTGGGACTGAGTTGGTTCTGCGAGATGTCAGGTACGTACCAACATCAGAATGA
Protein sequence
MNRYKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTSLSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVHKGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKEDLKKLDANANVVVHDVLVCVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGRLSKTRGIGDINLKIESGTELVLRDVRYVPTSE
Homology
BLAST of MC05g_new0107 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 5.2e-25
Identity = 84/268 (31.34%), Postives = 134/268 (50.00%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y + NK+YL ++ + + M E + SH+N LI QLA+L + +E AILLL S
Sbjct: 92 YMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNS 151
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVHKGK 123
L S++ + T + L G +++ ++ + E RK+ + + G +
Sbjct: 152 LPSSYDNLATTI--LHGKTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSS 211
Query: 124 EKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKR---HRRKFKEDL--KKLDANANVVVH 183
+ + K+ R+++ CY C++ GH+KR + RK K + +K D N +V
Sbjct: 212 NNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQ 271
Query: 184 D-----VLVCVESNIMSVD-QSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGRL 243
+ + + E M + SEWVVD AAS H + R LF + ++G V+M N
Sbjct: 272 NNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSY 331
Query: 244 SKTRGIGDINLKIESGTELVLRDVRYVP 261
SK GIGDI +K G LVL+DVR+VP
Sbjct: 332 SKIAGIGDICIKTNVGCTLVLKDVRHVP 357
BLAST of MC05g_new0107 vs. NCBI nr
Match:
TKR90717.1 (hypothetical protein D5086_0000230290 [Populus alba])
HSP 1 Score: 167 bits (422), Expect = 9.22e-46
Identity = 101/269 (37.55%), Postives = 161/269 (59.85%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M ENASV H+N + NQL+S+ I F+DE+ A++LL S
Sbjct: 91 YEKPSANNKVHLMKKLFNLKMVENASVTQHLNNFNTITNQLSSVAIEFNDEIRALILLAS 150
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+TAVSN G LK+ +I D+ +AEE+RRK+SG+ SS+SGSAL ++
Sbjct: 151 LPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRG 210
Query: 124 --------KGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKE-DLKKLDA 183
+G+ K Y + SR+ ++EC+ C K GH+ R+ K K + +A
Sbjct: 211 RRHDRGSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKNPEADSANA 270
Query: 184 NANVVVHDVLVCVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGR 243
+ V +++ V S I EW++D+ AS H + + ++ ++G+V + +G
Sbjct: 271 TTDEVQDALILAVHSQI------DEWILDSGASFHYTPHNEMLQNYVGGDHGVVYLADGT 330
Query: 244 LSKTRGIGDINLKIESGTELVLRDVRYVP 260
GIGD+ +K +G+ L++VR+VP
Sbjct: 331 PLNIVGIGDVQIKTMNGSIWTLQNVRHVP 345
BLAST of MC05g_new0107 vs. NCBI nr
Match:
TKS02608.1 (hypothetical protein D5086_0000161380 [Populus alba])
HSP 1 Score: 168 bits (426), Expect = 1.02e-45
Identity = 101/269 (37.55%), Postives = 163/269 (60.59%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M EN SV H+N + NQL+S++I F DE+ A++LL S
Sbjct: 91 YEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTITNQLSSVEIEFDDEIRALILLAS 150
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+TAVSN G LK+ +I D+ +AEE+RRK+SG+ SS+SGSAL ++
Sbjct: 151 LPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRG 210
Query: 124 --------KGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKE-DLKKLDA 183
+G+ K Y + SR+ ++EC+ C K GH+ R+ K K+ + +A
Sbjct: 211 RRHDRGSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKKPEADSANA 270
Query: 184 NANVVVHDVLVCVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGR 243
+ V +++ V+S I EW++D+ AS H + + ++ ++G+V + +G
Sbjct: 271 TTDEVQDALILVVQSQI------DEWILDSGASFHCTPHNEMLQNYVGGDHGVVYLADGT 330
Query: 244 LSKTRGIGDINLKIESGTELVLRDVRYVP 260
K GIGD+ +K +G+ L++VR+VP
Sbjct: 331 PLKIVGIGDVQIKTMNGSIWTLQNVRHVP 345
BLAST of MC05g_new0107 vs. NCBI nr
Match:
CAN75500.1 (hypothetical protein VITISV_034155 [Vitis vinifera])
HSP 1 Score: 166 bits (420), Expect = 6.88e-45
Identity = 99/267 (37.08%), Postives = 165/267 (61.80%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M ENASV H+NE + NQL+S++I F DE++A+++L S
Sbjct: 92 YEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLSSVEIEFDDEIHALIVLAS 151
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+ AVSN G + LK+ +I D+ + EEIRR+++G+ +S SGSAL +
Sbjct: 152 LPNSWEAMRMAVSNSTGKEKLKYNDIRDLILVEEIRRRDAGE----TSGSGSALNLETRG 211
Query: 124 KGKEKFDYDDRQY-KNSRRNENG-----EIECYYCHKKGHYKRHRRKFKEDLKKLDANAN 183
+G K R +NS RN + +++C+ C K GH+KR + K+ K D +AN
Sbjct: 212 RGNNKNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKK--KNQDDSAN 271
Query: 184 VVVHDVLVCVESNIMSVDQS-SEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGRLS 243
V +V ++ +++VD +WV+D+ AS H + R + ++ ++G V + +G
Sbjct: 272 AVTEEVQ---DALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSAL 331
Query: 244 KTRGIGDINLKIESGTELVLRDVRYVP 260
G+GD+ + + +G+ +L VR++P
Sbjct: 332 DVVGLGDVRISLPNGSVWLLEKVRHIP 349
BLAST of MC05g_new0107 vs. NCBI nr
Match:
TKS09526.1 (hypothetical protein D5086_0000092290 [Populus alba])
HSP 1 Score: 164 bits (415), Expect = 9.60e-45
Identity = 104/270 (38.52%), Postives = 162/270 (60.00%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M +N SV H+N + NQL+S++I F DE+ A++LL S
Sbjct: 46 YEKPSANNKVHLMKKLFNLKMVKNTSVTQHLNNFNTITNQLSSVEIEFDDEIRALILLAS 105
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+TAVSN G LK+ +I D+ +AEE+RRK+SG+ SS+SGSAL ++
Sbjct: 106 LPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRG 165
Query: 124 --------KGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKEDLKKLDAN 183
+G K Y + SR+ ++EC+ C K GH+ R K K+ + AN
Sbjct: 166 RRQDRGLSRGISKSRYRSKSKFGSRK----QVECWNCGKPGHFMRSCTKPKKP-EADSAN 225
Query: 184 ANV-VVHDVLV-CVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNG 243
A VHD L+ V+S I +W++D+ AS H + + ++ +YG+V + +G
Sbjct: 226 ATTDEVHDALILAVQSPI------DDWILDSGASFHCTPHHDMMLNYVAGDYGVVYLADG 285
Query: 244 RLSKTRGIGDINLKIESGTELVLRDVRYVP 260
+ GIGD+ +K +G+ L++VR+VP
Sbjct: 286 QPMAVVGIGDVQIKTMNGSTWNLQNVRHVP 300
BLAST of MC05g_new0107 vs. NCBI nr
Match:
TKR89927.1 (hypothetical protein D5086_0000238200 [Populus alba])
HSP 1 Score: 166 bits (421), Expect = 9.73e-45
Identity = 99/269 (36.80%), Postives = 162/269 (60.22%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M EN SV H+N + NQL+S++I F DE+ A++LL S
Sbjct: 91 YEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTITNQLSSVEIEFDDEIRALILLAS 150
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+TAVSN G LK+ +I D+ +AEE+RRK+SG+ SS+SGSAL ++
Sbjct: 151 LPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRG 210
Query: 124 --------KGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKE-DLKKLDA 183
+G+ K Y + SR+ ++EC+ C K GH+ R+ K K+ + +A
Sbjct: 211 RRHDRGSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKKPEADSANA 270
Query: 184 NANVVVHDVLVCVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGR 243
+ V +++ V+S I EW++D+ AS H + + ++ ++G+V + +G
Sbjct: 271 TTDEVQDALILAVQSQI------DEWILDSGASFHCTPHNEMLQNYVGGDHGVVYLADGT 330
Query: 244 LSKTRGIGDINLKIESGTELVLRDVRYVP 260
GIGD+ +K +G+ L+++R+VP
Sbjct: 331 PLNIVGIGDVQIKTMNGSIWTLQNIRHVP 345
BLAST of MC05g_new0107 vs. ExPASy TrEMBL
Match:
A0A4U5P397 (CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000230290 PE=4 SV=1)
HSP 1 Score: 167 bits (422), Expect = 4.46e-46
Identity = 101/269 (37.55%), Postives = 161/269 (59.85%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M ENASV H+N + NQL+S+ I F+DE+ A++LL S
Sbjct: 91 YEKPSANNKVHLMKKLFNLKMVENASVTQHLNNFNTITNQLSSVAIEFNDEIRALILLAS 150
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+TAVSN G LK+ +I D+ +AEE+RRK+SG+ SS+SGSAL ++
Sbjct: 151 LPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRG 210
Query: 124 --------KGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKE-DLKKLDA 183
+G+ K Y + SR+ ++EC+ C K GH+ R+ K K + +A
Sbjct: 211 RRHDRGSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKNPEADSANA 270
Query: 184 NANVVVHDVLVCVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGR 243
+ V +++ V S I EW++D+ AS H + + ++ ++G+V + +G
Sbjct: 271 TTDEVQDALILAVHSQI------DEWILDSGASFHYTPHNEMLQNYVGGDHGVVYLADGT 330
Query: 244 LSKTRGIGDINLKIESGTELVLRDVRYVP 260
GIGD+ +K +G+ L++VR+VP
Sbjct: 331 PLNIVGIGDVQIKTMNGSIWTLQNVRHVP 345
BLAST of MC05g_new0107 vs. ExPASy TrEMBL
Match:
A0A4U5PY83 (CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000161380 PE=4 SV=1)
HSP 1 Score: 168 bits (426), Expect = 4.95e-46
Identity = 101/269 (37.55%), Postives = 163/269 (60.59%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M EN SV H+N + NQL+S++I F DE+ A++LL S
Sbjct: 91 YEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTITNQLSSVEIEFDDEIRALILLAS 150
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+TAVSN G LK+ +I D+ +AEE+RRK+SG+ SS+SGSAL ++
Sbjct: 151 LPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRG 210
Query: 124 --------KGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKE-DLKKLDA 183
+G+ K Y + SR+ ++EC+ C K GH+ R+ K K+ + +A
Sbjct: 211 RRHDRGSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKKPEADSANA 270
Query: 184 NANVVVHDVLVCVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGR 243
+ V +++ V+S I EW++D+ AS H + + ++ ++G+V + +G
Sbjct: 271 TTDEVQDALILVVQSQI------DEWILDSGASFHCTPHNEMLQNYVGGDHGVVYLADGT 330
Query: 244 LSKTRGIGDINLKIESGTELVLRDVRYVP 260
K GIGD+ +K +G+ L++VR+VP
Sbjct: 331 PLKIVGIGDVQIKTMNGSIWTLQNVRHVP 345
BLAST of MC05g_new0107 vs. ExPASy TrEMBL
Match:
A5CB53 (CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_034155 PE=4 SV=1)
HSP 1 Score: 166 bits (420), Expect = 3.33e-45
Identity = 99/267 (37.08%), Postives = 165/267 (61.80%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M ENASV H+NE + NQL+S++I F DE++A+++L S
Sbjct: 92 YEKPSANNKVHLMKKLFNLKMAENASVAQHLNEFNTITNQLSSVEIEFDDEIHALIVLAS 151
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+ AVSN G + LK+ +I D+ + EEIRR+++G+ +S SGSAL +
Sbjct: 152 LPNSWEAMRMAVSNSTGKEKLKYNDIRDLILVEEIRRRDAGE----TSGSGSALNLETRG 211
Query: 124 KGKEKFDYDDRQY-KNSRRNENG-----EIECYYCHKKGHYKRHRRKFKEDLKKLDANAN 183
+G K R +NS RN + +++C+ C K GH+KR + K+ K D +AN
Sbjct: 212 RGNNKNSNQGRSNSRNSNRNRSKSRSGQQVQCWNCGKTGHFKRQCKSPKK--KNQDDSAN 271
Query: 184 VVVHDVLVCVESNIMSVDQS-SEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGRLS 243
V +V ++ +++VD +WV+D+ AS H + R + ++ ++G V + +G
Sbjct: 272 AVTEEVQ---DALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSAL 331
Query: 244 KTRGIGDINLKIESGTELVLRDVRYVP 260
G+GD+ + + +G+ +L VR++P
Sbjct: 332 DVVGLGDVRISLPNGSVWLLEKVRHIP 349
BLAST of MC05g_new0107 vs. ExPASy TrEMBL
Match:
A0A4V6AA29 (CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000092290 PE=4 SV=1)
HSP 1 Score: 164 bits (415), Expect = 4.65e-45
Identity = 104/270 (38.52%), Postives = 162/270 (60.00%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M +N SV H+N + NQL+S++I F DE+ A++LL S
Sbjct: 46 YEKPSANNKVHLMKKLFNLKMVKNTSVTQHLNNFNTITNQLSSVEIEFDDEIRALILLAS 105
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+TAVSN G LK+ +I D+ +AEE+RRK+SG+ SS+SGSAL ++
Sbjct: 106 LPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRG 165
Query: 124 --------KGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKEDLKKLDAN 183
+G K Y + SR+ ++EC+ C K GH+ R K K+ + AN
Sbjct: 166 RRQDRGLSRGISKSRYRSKSKFGSRK----QVECWNCGKPGHFMRSCTKPKKP-EADSAN 225
Query: 184 ANV-VVHDVLV-CVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNG 243
A VHD L+ V+S I +W++D+ AS H + + ++ +YG+V + +G
Sbjct: 226 ATTDEVHDALILAVQSPI------DDWILDSGASFHCTPHHDMMLNYVAGDYGVVYLADG 285
Query: 244 RLSKTRGIGDINLKIESGTELVLRDVRYVP 260
+ GIGD+ +K +G+ L++VR+VP
Sbjct: 286 QPMAVVGIGDVQIKTMNGSTWNLQNVRHVP 300
BLAST of MC05g_new0107 vs. ExPASy TrEMBL
Match:
A0A4U5P1P0 (CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000238200 PE=4 SV=1)
HSP 1 Score: 166 bits (421), Expect = 4.71e-45
Identity = 99/269 (36.80%), Postives = 162/269 (60.22%), Query Frame = 0
Query: 4 YKKPSANNKVYLVRRYFNIRMDENASVNSHINEVTNLINQLASLKITFSDEVNAILLLTS 63
Y+KPSANNKV+L+++ FN++M EN SV H+N + NQL+S++I F DE+ A++LL S
Sbjct: 91 YEKPSANNKVHLMKKLFNLKMVENTSVTQHLNNFNTITNQLSSVEIEFDDEIRALILLAS 150
Query: 64 LSESWETMKTAVSNLLGDKSLKFTEICDVTIAEEIRRKESGKESTSSSASGSALIVH--- 123
L SWE M+TAVSN G LK+ +I D+ +AEE+RRK+SG+ SS+SGSAL ++
Sbjct: 151 LPSSWEGMRTAVSNSAGKSKLKYDDIRDLILAEEVRRKDSGE----SSSSGSALNINTRG 210
Query: 124 --------KGKEKFDYDDRQYKNSRRNENGEIECYYCHKKGHYKRHRRKFKE-DLKKLDA 183
+G+ K Y + SR+ ++EC+ C K GH+ R+ K K+ + +A
Sbjct: 211 RRHDRGSSRGRSKSRYRSKSKFGSRK----QVECWNCGKPGHFSRNCTKPKKPEADSANA 270
Query: 184 NANVVVHDVLVCVESNIMSVDQSSEWVVDNAASVHISSDRRLFTSFTVDNYGMVRMRNGR 243
+ V +++ V+S I EW++D+ AS H + + ++ ++G+V + +G
Sbjct: 271 TTDEVQDALILAVQSQI------DEWILDSGASFHCTPHNEMLQNYVGGDHGVVYLADGT 330
Query: 244 LSKTRGIGDINLKIESGTELVLRDVRYVP 260
GIGD+ +K +G+ L+++R+VP
Sbjct: 331 PLNIVGIGDVQIKTMNGSIWTLQNIRHVP 345
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 5.2e-25 | 31.34 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
TKR90717.1 | 9.22e-46 | 37.55 | hypothetical protein D5086_0000230290 [Populus alba] | [more] |
TKS02608.1 | 1.02e-45 | 37.55 | hypothetical protein D5086_0000161380 [Populus alba] | [more] |
CAN75500.1 | 6.88e-45 | 37.08 | hypothetical protein VITISV_034155 [Vitis vinifera] | [more] |
TKS09526.1 | 9.60e-45 | 38.52 | hypothetical protein D5086_0000092290 [Populus alba] | [more] |
TKR89927.1 | 9.73e-45 | 36.80 | hypothetical protein D5086_0000238200 [Populus alba] | [more] |
Match Name | E-value | Identity | Description | |
A0A4U5P397 | 4.46e-46 | 37.55 | CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000230290... | [more] |
A0A4U5PY83 | 4.95e-46 | 37.55 | CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000161380... | [more] |
A5CB53 | 3.33e-45 | 37.08 | CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_034155 ... | [more] |
A0A4V6AA29 | 4.65e-45 | 38.52 | CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000092290... | [more] |
A0A4U5P1P0 | 4.71e-45 | 36.80 | CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000238200... | [more] |
Match Name | E-value | Identity | Description | |