MC05g1022 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g1022
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	F-box domain-containing protein
Location	MC05: 13825138 .. 13825846 (-)
RNA-Seq Expression	MC05g1022
Synteny	MC05g1022

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGAGATGGCGAAGGAAAAAGCGAAAATTATGAACATAAATTTCGAGCTTCCACCTGAAATTGTTCAACTAATACTCTCGAAACTCCCCTTCTTCAATTTTCCCACTTCTCGACTCGTCTGCAAACTCTGGAACAATCTGATTTTGAGTTGTAAGTTTGAATCTCAAACTGATCAAATTTCAAATCTTTTCTTTGCTTATAGTTACCCCTATACCAATATCCAGTGCATCCACTTGGATCCAATCAAATTTCAATTTCAACTTTGTTGCCTCCTTTAGCCTCCATTCTAGCTGGAGGACCAAGATCAACACCTCCCAATCCCATTCCAAGGTGTCTGTCCAAATTGTCAATTCCGCCAATGGACTCCTCTGCCTCACCAAGACTAAGACAACTCCTCGAGATCGAGATCGAGACCGAGACCGACATCGTGTTGGCATATTGAATCCTGTGACTAATGAGTACATCAAGCTTCCCACCGGAGATCTGGATCGGTATCGGTATCGCTATTGCCATTACGGGTTCGGGTTTAGTCCCGTGACCAAGGAGTACAAAATAGTACGAAACTGGTGCAGATACAAAACAGGCATTACAATTGTAGAGATTATGGTATTTGGGAGAAGCCACCCCCAGCAATGGCAATGGACTAGCATTGCCTCGCCTGTTCGCATCAAATCCCATGGCGTTTGCTTCAATGGAGACCTTTTTTTT

mRNA sequence

TTTGAGATGGCGAAGGAAAAAGCGAAAATTATGAACATAAATTTCGAGCTTCCACCTGAAATTGTTCAACTAATACTCTCGAAACTCCCCTTCTTCAATTTTCCCACTTCTCGACTCGTCTGCAAACTCTGGAACAATCTGATTTTGAGTTGTAAGTTTGAATCTCAAACTGATCAAATTTCAAATCTTTTCTTTGCTTATAGTTACCCCTATACCAATATCCAGTGCATCCACTTGGATCCAATCAAATTTAATTTCAACTTTGTTGCCTCCTTTAGCCTCCATTCTAGCTGGAGGACCAAGATCAACACCTCCCAATCCCATTCCAAGGTGTCTGTCCAAATTGTCAATTCCGCCAATGGACTCCTCTGCCTCACCAAGACTAAGACAACTCCTCGAGATCGAGATCGAGACCGAGACCGACATCGTGTTGGCATATTGAATCCTGTGACTAATGAGTACATCAAGCTTCCCACCGGAGATCTGGATCGGTATCGGTATCGCTATTGCCATTACGGGTTCGGGTTTAGTCCCGTGACCAAGGAGTACAAAATAGTACGAAACTGGTGCAGATACAAAACAGGCATTACAATTGTAGAGATTATGGTATTTGGGAGAAGCCACCCCCAGCAATGGCAATGGACTAGCATTGCCTCGCCTGTTCGCATCAAATCCCATGGCGTTTGCTTCAATGGAGACCTTTTTTTT

Coding sequence (CDS)

TTTGAGATGGCGAAGGAAAAAGCGAAAATTATGAACATAAATTTCGAGCTTCCACCTGAAATTGTTCAACTAATACTCTCGAAACTCCCCTTCTTCAATTTTCCCACTTCTCGACTCGTCTGCAAACTCTGGAACAATCTGATTTTGAGTTGTAAGTTTGAATCTCAAACTGATCAAATTTCAAATCTTTTCTTTGCTTATAGTTACCCCTATACCAATATCCAGTGCATCCACTTGGATCCAATCAAATTTAATTTCAACTTTGTTGCCTCCTTTAGCCTCCATTCTAGCTGGAGGACCAAGATCAACACCTCCCAATCCCATTCCAAGGTGTCTGTCCAAATTGTCAATTCCGCCAATGGACTCCTCTGCCTCACCAAGACTAAGACAACTCCTCGAGATCGAGATCGAGACCGAGACCGACATCGTGTTGGCATATTGAATCCTGTGACTAATGAGTACATCAAGCTTCCCACCGGAGATCTGGATCGGTATCGGTATCGCTATTGCCATTACGGGTTCGGGTTTAGTCCCGTGACCAAGGAGTACAAAATAGTACGAAACTGGTGCAGATACAAAACAGGCATTACAATTGTAGAGATTATGGTATTTGGGAGAAGCCACCCCCAGCAATGGCAATGGACTAGCATTGCCTCGCCTGTTCGCATCAAATCCCATGGCGTTTGCTTCAATGGAGACCTTTTTTTT

Protein sequence

FEMAKEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISNLFFAYSYPYTNIQCIHLDPIKFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKSHGVCFNGDLFF

Homology

[Close]

BLAST of MC05g1022 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 9.7e-07
Identity = 46/173 (26.59%), Postives = 77/173 (44.51%), Query Frame = 0


Query: 17  LPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISNLFFAYSYPYTNIQC 76
           LP +I+  I S+LP  +      VC+ W +++          Q   L  + S P      
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVL---------TQHGRLSSSSSSPTKPCLL 87

Query: 77  IHLD-PIKFNFNFVASFSLHSSWRTKINTSQ-SHSKVSVQIVNSANGLLCLTKTKTTPRD 136
           +H D PI+   +F+         +TK  T + + S     +V S NGLLCL+ +      
Sbjct: 88  LHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLY---- 147

Query: 137 RDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVR 188
                    + + NP T   ++LP    ++Y  +   +GFGF  +TKEYK+++
Sbjct: 148 ------NDSLYLYNPFTTNSLELPECS-NKYHDQELVFGFGFHEMTKEYKVLK 180

[Close]

BLAST of MC05g1022 vs. ExPASy Swiss-Prot
Match: Q0V7S0 (F-box protein At1g47340 OS=Arabidopsis thaliana OX=3702 GN=At1g47340 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.7e-06
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 146 ILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWCRYKTGITIVEIMVFG 205
           I NP+T  Y  LP   L+RYR  +    FGF P+ K+YK++  +  Y +G     ++ FG
Sbjct: 170 ICNPLTGRYASLPF--LERYRKAFSF--FGFDPIEKQYKVL--FMAYPSGPDHHTVLTFG 229

Query: 206 RSHPQQWQWTSIASPVR--IKSHGVCFNGDLFF 237
                +  W  I   V+  I S G+C NG +++
Sbjct: 230 TG---EMSWRKIECSVKHDIVSDGICINGVMYY 253

[Close]

BLAST of MC05g1022 vs. ExPASy Swiss-Prot
Match: Q9C627 (Putative F-box protein At1g46984 OS=Arabidopsis thaliana OX=3702 GN=At1g46984 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.1e-05
Identity = 58/228 (25.44%), Postives = 95/228 (41.67%), Query Frame = 0


Query: 17  LPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFES----QTDQISNLFFAYSYPYT 76
           LP +++  ILS+LP  +    RLV K W +++ S  F      ++     L F   Y   
Sbjct: 24  LPIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDFTESFLIKSPPRPRLLFTIRYGSK 83

Query: 77  NIQCIHLDPIKFNFNF-VASFSLHSSWRTKINTSQSHSKVSVQIVNSANGLLCLTKTKTT 136
                   P  F+ NF V +   H  +      S +    S Q+V   NG + L    + 
Sbjct: 84  WHLFSAPQPRNFDENFPVVATDYHKGF------SGNWCMQSFQLV---NGFIYLNNRLSL 143

Query: 137 PRDRDRDRDRHRVGIL-NPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWC 196
               D      RV ++ NP T + I LP  DL   +  +    FG+ P+ K++K++    
Sbjct: 144 KGKID------RVSVIWNPSTGQQIPLP--DLG-VKNSHSKSFFGYDPIEKQFKVL---- 203

Query: 197 RYKTGITIVEIMVFGRSHPQQWQWTSIASP--VRIKSHGVCFNGDLFF 237
              T     +++  G      W+    + P   R KS+G+C NG L++
Sbjct: 204 -CITSSKEHQVLTLGTGRKLSWRKIEYSYPHYPRKKSNGICINGVLYY 228

[Close]

BLAST of MC05g1022 vs. ExPASy Swiss-Prot
Match: Q9SI34 (Putative F-box only protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBX9 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 46/184 (25.00%), Postives = 77/184 (41.85%), Query Frame = 0


Query: 16  ELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFES----QTDQISNLFFAYSYPY 75
           +LPP++V+ ILS++P  +    R  CK WN+L  + +F      +  + S++     Y  
Sbjct: 3   DLPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDYT- 62

Query: 76  TNIQCIHLDPIKFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANG-LLCLTKTKT 135
                  + P+  N NF  S     S  +  ++  +  +V +  V   +G LLC TK   
Sbjct: 63  -------VCPMSINLNFSGSSIEFKSVLSLKDSHYNSEQVYIAKVFHCDGLLLCTTKD-- 122

Query: 136 TPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWC 195
                      HR+ + NP   E  +    + D   Y     G+  +   + YKI+R W 
Sbjct: 123 -----------HRLLVWNPCLGE-TRWINFENDYKPYSRFSLGYKNNKSCRSYKILRFWT 164

[Close]

BLAST of MC05g1022 vs. ExPASy Swiss-Prot
Match: Q9SVX4 (F-box protein At3g57590 OS=Arabidopsis thaliana OX=3702 GN=At3g57590 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-04
Identity = 56/226 (24.78%), Postives = 92/226 (40.71%), Query Frame = 0


Query: 17  LPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFE----SQTDQISNLFFAYSYPYT 76
           +P +++  I S+LP  +    R + K W +++ S  F     +++     L FA      
Sbjct: 4   IPNDLILEIFSRLPAKSVIGFRTLSKHWASILRSPVFTELFLTRSSNRPRLLFAAE---R 63

Query: 77  NIQCIHLDPIKFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANGLLCLTKTKTTP 136
           N + +     +    +    S H  + TK +       VS  I +  +GLLC        
Sbjct: 64  NGEWLFFSSPQPQNRY--EKSSHLDYHTKFS-----GDVSRFICSYVSGLLCFP------ 123

Query: 137 RDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWCRY 196
            D    +D   V I NP T  Y  LP    D  RY+      GF P+ K++K++     +
Sbjct: 124 -DLWLSKDASPV-ICNPTTGMYESLP----DLMRYKNARGFLGFDPIGKQFKVLSEAYPF 183

Query: 197 KTGITIVEIMVFGRSHPQQWQWTSIASPV--RIKSHGVCFNGDLFF 237
                  EI+  G +    W+   I+ P   R  S G+C NG L++
Sbjct: 184 SDQREHHEILTLG-TEELSWRSNIISCPAYDRSLSEGICINGVLYY 206

[Close]

BLAST of MC05g1022 vs. NCBI nr
Match: XP_022147764.1 (uncharacterized protein LOC111016621 [Momordica charantia])

HSP 1 Score: 344 bits (882), Expect = 2.17e-115
Identity = 180/238 (75.63%), Postives = 186/238 (78.15%), Query Frame = 0


Query: 3   MAKEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILS---CKFESQTDQ 62
           MAKEK KIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILS       S +  
Sbjct: 1   MAKEKGKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSFTPIPISSASTW 60

Query: 63  ISNLFFAYSYPYTNIQCIHLDPIKFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA 122
           I +                     FNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA
Sbjct: 61  IQS--------------------NFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA 120

Query: 123 NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPV 182
           NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPV
Sbjct: 121 NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPV 180

Query: 183 TKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKSHGVCFNG-DLFF 236
           TKEYKIVRNWCRYKTGITIVEIM FGRSHP       +A P    S+ + F   + FF
Sbjct: 181 TKEYKIVRNWCRYKTGITIVEIMAFGRSHPSNGN--GLALPRLFASNPMAFASMETFF 216

[Close]

BLAST of MC05g1022 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 163 bits (412), Expect = 2.75e-44
Identity = 110/240 (45.83%), Postives = 134/240 (55.83%), Query Frame = 0


Query: 5   KEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISNLF 64
           K K+KI   N ELPP+I+QLI SKLPFFN PT RLV   WNNL+LSCKF+     ISNLF
Sbjct: 4   KPKSKIKTTNSELPPDILQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSIS-ISNLF 63

Query: 65  FAYSYPYT--NIQCIHLDPIKFN-FNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANG 124
           FA+ Y     N+ C+ LDP      + VASF+ H       N S    K+S  I+NS +G
Sbjct: 64  FAHFYSCRDRNLHCVDLDPQHLEGMSTVASFTFHP------NVSSGSCKIS--IINSCSG 123

Query: 125 LLCLTKTKTTPRDRDRDRDRHRVGI---LNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSP 184
           L+ L  TK       R R  HR G+   LNP+TNEY KLPT        +   YG GFSP
Sbjct: 124 LISLLITK-------RRRRGHRPGVVCVLNPMTNEYFKLPTFRSKGDSVKDYFYGLGFSP 183

Query: 185 VTKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIAS-PVRIKS-HGVCFNGDLFF 236
            TK+YK+ R    Y     IVEI  FG S     +WT + S P  +   HGV FNG L++
Sbjct: 184 RTKQYKLART--HYVCHEFIVEIFAFGTS----CEWTPVGSVPYFLNEYHGVYFNGGLYW 221

[Close]

BLAST of MC05g1022 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 153 bits (387), Expect = 1.32e-40
Identity = 100/240 (41.67%), Postives = 133/240 (55.42%), Query Frame = 0


Query: 3   MAKEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISN 62
           M K K  I+N ++ELPP+I+Q I SK+PFFN PT RLV + WNNLI SCKF+  T  I +
Sbjct: 1   MEKPKTNIINKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTS-IYH 60

Query: 63  LFFA--YSYPYTNIQCIHLDPIKFN-FNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA 122
           LFFA  YS  + N+ C+  DP      + VASF+ H  + +  +         + I+NS 
Sbjct: 61  LFFARFYSSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSR--------ITIINSC 120

Query: 123 NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRY-RYCHYGFGFSP 182
           +GL+ L  TK   R + RD     V +LNP+TNEY K P   L   +   YC YG GFSP
Sbjct: 121 SGLISLLITKRRRRGQRRDV----VCVLNPITNEYFKHPNLRLKGDKVPNYC-YGLGFSP 180

Query: 183 VTKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKS--HGVCFNGDLFF 236
            T +YK+ R    +     IV+I  FG S     +WT I S     +  HGV FNG L++
Sbjct: 181 KTNQYKLART--HFAHNEFIVDIFAFGTS----CEWTPIGSVPNFLNEYHGVYFNGGLYW 220

[Close]

BLAST of MC05g1022 vs. NCBI nr
Match: XP_004134745.1 (F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g07870 [Cucumis sativus] >XP_031743637.1 F-box protein At3g07870 [Cucumis sativus] >KGN49139.1 hypothetical protein Csa_003023 [Cucumis sativus])

HSP 1 Score: 149 bits (377), Expect = 3.82e-39
Identity = 96/240 (40.00%), Postives = 130/240 (54.17%), Query Frame = 0


Query: 5   KEKAKIMNI-NFELPPE-IVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISN 64
           K K +I  + N E PP+ I+Q+ILSK+P FN  + RLVCK WNNLIL+CKF+        
Sbjct: 4   KWKGEIKKLSNSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLF---- 63

Query: 65  LFFAYSYPYTNIQCIHLDPIKFN-FNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANG 124
           L FAY  P   + C+  DP+ F   N + SF+ H     K +TS S    S+ I+N+ NG
Sbjct: 64  LSFAYDCPSRTLYCVDFDPMYFEGMNSIGSFTFHP----KFSTSDS----SISIINACNG 123

Query: 125 LLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYC-----HYGFGF 184
           LL L  +K     R      + +GILNP+TNEY K P    ++ +   C      YG GF
Sbjct: 124 LLSLLISK-----RKLGSVSYVLGILNPMTNEYFKFPA---EKSKSHCCCGRLYSYGLGF 183

Query: 185 SPVTKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKSHGVCFNGDLFF 236
           +P TK+YKI R   R     T+VEI  FG +H Q W        + ++ HGV F G L++
Sbjct: 184 NPKTKQYKIARTSFRPDESTTLVEIFTFGSTH-QVWTPVGFLPSLVVEDHGVYFKGGLYW 222

[Close]

BLAST of MC05g1022 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 148 bits (374), Expect = 1.07e-38
Identity = 99/238 (41.60%), Postives = 125/238 (52.52%), Query Frame = 0


Query: 5   KEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISNLF 64
           K K  I+N   ELPP+++QLI SKLPFFN PT RLV   WNNLI SCKF+     IS+LF
Sbjct: 4   KPKTNIVNKRSELPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSIS-ISHLF 63

Query: 65  FA--YSYPYTNIQCIHLDPIKFN-FNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANG 124
           FA  YS  + N+ C+  DP      + VASF+ H           S     + I+NS +G
Sbjct: 64  FARFYSSRHPNLHCVEFDPQHAEGMSTVASFAFHPDL--------SSGSCRITIINSCSG 123

Query: 125 LLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRY-RYCHYGFGFSPVT 184
           L+ L   K   R    D     V +LNP+TNEY KLPT      R   YC YG GFSP T
Sbjct: 124 LISLIINKRRRRGHRLDL----VCVLNPITNEYFKLPTSRSKGDRVPNYC-YGLGFSPTT 183

Query: 185 KEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKS--HGVCFNGDLFF 236
            +YK+ R    +     IV+I  FG S     +WT + S     +  HGV  NG L++
Sbjct: 184 NQYKLART--HFTHDEFIVDIFAFGTS----CEWTPVGSVPNFLNEYHGVYLNGGLYW 221

[Close]

BLAST of MC05g1022 vs. ExPASy TrEMBL
Match: A0A6J1D1Z0 (uncharacterized protein LOC111016621 OS=Momordica charantia OX=3673 GN=LOC111016621 PE=4 SV=1)

HSP 1 Score: 344 bits (882), Expect = 1.05e-115
Identity = 180/238 (75.63%), Postives = 186/238 (78.15%), Query Frame = 0


Query: 3   MAKEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILS---CKFESQTDQ 62
           MAKEK KIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILS       S +  
Sbjct: 1   MAKEKGKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSFTPIPISSASTW 60

Query: 63  ISNLFFAYSYPYTNIQCIHLDPIKFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA 122
           I +                     FNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA
Sbjct: 61  IQS--------------------NFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA 120

Query: 123 NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPV 182
           NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPV
Sbjct: 121 NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPV 180

Query: 183 TKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKSHGVCFNG-DLFF 236
           TKEYKIVRNWCRYKTGITIVEIM FGRSHP       +A P    S+ + F   + FF
Sbjct: 181 TKEYKIVRNWCRYKTGITIVEIMAFGRSHPSNGN--GLALPRLFASNPMAFASMETFF 216

[Close]

BLAST of MC05g1022 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 153 bits (387), Expect = 6.37e-41
Identity = 100/240 (41.67%), Postives = 133/240 (55.42%), Query Frame = 0


Query: 3   MAKEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISN 62
           M K K  I+N ++ELPP+I+Q I SK+PFFN PT RLV + WNNLI SCKF+  T  I +
Sbjct: 1   MEKPKTNIINKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTS-IYH 60

Query: 63  LFFA--YSYPYTNIQCIHLDPIKFN-FNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA 122
           LFFA  YS  + N+ C+  DP      + VASF+ H  + +  +         + I+NS 
Sbjct: 61  LFFARFYSSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSR--------ITIINSC 120

Query: 123 NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRY-RYCHYGFGFSP 182
           +GL+ L  TK   R + RD     V +LNP+TNEY K P   L   +   YC YG GFSP
Sbjct: 121 SGLISLLITKRRRRGQRRDV----VCVLNPITNEYFKHPNLRLKGDKVPNYC-YGLGFSP 180

Query: 183 VTKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKS--HGVCFNGDLFF 236
            T +YK+ R    +     IV+I  FG S     +WT I S     +  HGV FNG L++
Sbjct: 181 KTNQYKLART--HFAHNEFIVDIFAFGTS----CEWTPIGSVPNFLNEYHGVYFNGGLYW 220

[Close]

BLAST of MC05g1022 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 153 bits (387), Expect = 6.37e-41
Identity = 100/240 (41.67%), Postives = 133/240 (55.42%), Query Frame = 0


Query: 3   MAKEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISN 62
           M K K  I+N ++ELPP+I+Q I SK+PFFN PT RLV + WNNLI SCKF+  T  I +
Sbjct: 1   MEKPKTNIINKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTS-IYH 60

Query: 63  LFFA--YSYPYTNIQCIHLDPIKFN-FNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSA 122
           LFFA  YS  + N+ C+  DP      + VASF+ H  + +  +         + I+NS 
Sbjct: 61  LFFARFYSSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSR--------ITIINSC 120

Query: 123 NGLLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRY-RYCHYGFGFSP 182
           +GL+ L  TK   R + RD     V +LNP+TNEY K P   L   +   YC YG GFSP
Sbjct: 121 SGLISLLITKRRRRGQRRDV----VCVLNPITNEYFKHPNLRLKGDKVPNYC-YGLGFSP 180

Query: 183 VTKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKS--HGVCFNGDLFF 236
            T +YK+ R    +     IV+I  FG S     +WT I S     +  HGV FNG L++
Sbjct: 181 KTNQYKLART--HFAHNEFIVDIFAFGTS----CEWTPIGSVPNFLNEYHGVYFNGGLYW 220

[Close]

BLAST of MC05g1022 vs. ExPASy TrEMBL
Match: A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 1.85e-39
Identity = 96/240 (40.00%), Postives = 130/240 (54.17%), Query Frame = 0


Query: 5   KEKAKIMNI-NFELPPE-IVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISN 64
           K K +I  + N E PP+ I+Q+ILSK+P FN  + RLVCK WNNLIL+CKF+        
Sbjct: 4   KWKGEIKKLSNSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSLF---- 63

Query: 65  LFFAYSYPYTNIQCIHLDPIKFN-FNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANG 124
           L FAY  P   + C+  DP+ F   N + SF+ H     K +TS S    S+ I+N+ NG
Sbjct: 64  LSFAYDCPSRTLYCVDFDPMYFEGMNSIGSFTFHP----KFSTSDS----SISIINACNG 123

Query: 125 LLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYC-----HYGFGF 184
           LL L  +K     R      + +GILNP+TNEY K P    ++ +   C      YG GF
Sbjct: 124 LLSLLISK-----RKLGSVSYVLGILNPMTNEYFKFPA---EKSKSHCCCGRLYSYGLGF 183

Query: 185 SPVTKEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKSHGVCFNGDLFF 236
           +P TK+YKI R   R     T+VEI  FG +H Q W        + ++ HGV F G L++
Sbjct: 184 NPKTKQYKIARTSFRPDESTTLVEIFTFGSTH-QVWTPVGFLPSLVVEDHGVYFKGGLYW 222

[Close]

BLAST of MC05g1022 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 148 bits (374), Expect = 5.20e-39
Identity = 99/238 (41.60%), Postives = 125/238 (52.52%), Query Frame = 0


Query: 5   KEKAKIMNINFELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISNLF 64
           K K  I+N   ELPP+++QLI SKLPFFN PT RLV   WNNLI SCKF+     IS+LF
Sbjct: 4   KPKTNIVNKRSELPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSIS-ISHLF 63

Query: 65  FA--YSYPYTNIQCIHLDPIKFN-FNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANG 124
           FA  YS  + N+ C+  DP      + VASF+ H           S     + I+NS +G
Sbjct: 64  FARFYSSRHPNLHCVEFDPQHAEGMSTVASFAFHPDL--------SSGSCRITIINSCSG 123

Query: 125 LLCLTKTKTTPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRY-RYCHYGFGFSPVT 184
           L+ L   K   R    D     V +LNP+TNEY KLPT      R   YC YG GFSP T
Sbjct: 124 LISLIINKRRRRGHRLDL----VCVLNPITNEYFKLPTSRSKGDRVPNYC-YGLGFSPTT 183

Query: 185 KEYKIVRNWCRYKTGITIVEIMVFGRSHPQQWQWTSIASPVRIKS--HGVCFNGDLFF 236
            +YK+ R    +     IV+I  FG S     +WT + S     +  HGV  NG L++
Sbjct: 184 NQYKLART--HFTHDEFIVDIFAFGTS----CEWTPVGSVPNFLNEYHGVYLNGGLYW 221

[Close]

BLAST of MC05g1022 vs. TAIR 10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-08
Identity = 46/173 (26.59%), Postives = 77/173 (44.51%), Query Frame = 0


Query: 17  LPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFESQTDQISNLFFAYSYPYTNIQC 76
           LP +I+  I S+LP  +      VC+ W +++          Q   L  + S P      
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVL---------TQHGRLSSSSSSPTKPCLL 87

Query: 77  IHLD-PIKFNFNFVASFSLHSSWRTKINTSQ-SHSKVSVQIVNSANGLLCLTKTKTTPRD 136
           +H D PI+   +F+         +TK  T + + S     +V S NGLLCL+ +      
Sbjct: 88  LHCDSPIRNGLHFLDLSEEEKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLY---- 147

Query: 137 RDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVR 188
                    + + NP T   ++LP    ++Y  +   +GFGF  +TKEYK+++
Sbjct: 148 ------NDSLYLYNPFTTNSLELPECS-NKYHDQELVFGFGFHEMTKEYKVLK 180

[Close]

BLAST of MC05g1022 vs. TAIR 10
Match: AT1G47340.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-07
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = 0


Query: 146 ILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWCRYKTGITIVEIMVFG 205
           I NP+T  Y  LP   L+RYR  +    FGF P+ K+YK++  +  Y +G     ++ FG
Sbjct: 170 ICNPLTGRYASLPF--LERYRKAFSF--FGFDPIEKQYKVL--FMAYPSGPDHHTVLTFG 229

Query: 206 RSHPQQWQWTSIASPVR--IKSHGVCFNGDLFF 237
                +  W  I   V+  I S G+C NG +++
Sbjct: 230 TG---EMSWRKIECSVKHDIVSDGICINGVMYY 253

[Close]

BLAST of MC05g1022 vs. TAIR 10
Match: AT1G46984.1 (F-box family protein )

HSP 1 Score: 50.1 bits (118), Expect = 2.9e-06
Identity = 58/228 (25.44%), Postives = 95/228 (41.67%), Query Frame = 0


Query: 17  LPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFES----QTDQISNLFFAYSYPYT 76
           LP +++  ILS+LP  +    RLV K W +++ S  F      ++     L F   Y   
Sbjct: 24  LPIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDFTESFLIKSPPRPRLLFTIRYGSK 83

Query: 77  NIQCIHLDPIKFNFNF-VASFSLHSSWRTKINTSQSHSKVSVQIVNSANGLLCLTKTKTT 136
                   P  F+ NF V +   H  +      S +    S Q+V   NG + L    + 
Sbjct: 84  WHLFSAPQPRNFDENFPVVATDYHKGF------SGNWCMQSFQLV---NGFIYLNNRLSL 143

Query: 137 PRDRDRDRDRHRVGIL-NPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWC 196
               D      RV ++ NP T + I LP  DL   +  +    FG+ P+ K++K++    
Sbjct: 144 KGKID------RVSVIWNPSTGQQIPLP--DLG-VKNSHSKSFFGYDPIEKQFKVL---- 203

Query: 197 RYKTGITIVEIMVFGRSHPQQWQWTSIASP--VRIKSHGVCFNGDLFF 237
              T     +++  G      W+    + P   R KS+G+C NG L++
Sbjct: 204 -CITSSKEHQVLTLGTGRKLSWRKIEYSYPHYPRKKSNGICINGVLYY 228

[Close]

BLAST of MC05g1022 vs. TAIR 10
Match: AT2G04920.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 48.5 bits (114), Expect = 8.5e-06
Identity = 46/184 (25.00%), Postives = 77/184 (41.85%), Query Frame = 0


Query: 16  ELPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFES----QTDQISNLFFAYSYPY 75
           +LPP++V+ ILS++P  +    R  CK WN+L  + +F      +  + S++     Y  
Sbjct: 3   DLPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDYT- 62

Query: 76  TNIQCIHLDPIKFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANG-LLCLTKTKT 135
                  + P+  N NF  S     S  +  ++  +  +V +  V   +G LLC TK   
Sbjct: 63  -------VCPMSINLNFSGSSIEFKSVLSLKDSHYNSEQVYIAKVFHCDGLLLCTTKD-- 122

Query: 136 TPRDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWC 195
                      HR+ + NP   E  +    + D   Y     G+  +   + YKI+R W 
Sbjct: 123 -----------HRLLVWNPCLGE-TRWINFENDYKPYSRFSLGYKNNKSCRSYKILRFWT 164

[Close]

BLAST of MC05g1022 vs. TAIR 10
Match: AT3G57590.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-05
Identity = 56/226 (24.78%), Postives = 92/226 (40.71%), Query Frame = 0


Query: 17  LPPEIVQLILSKLPFFNFPTSRLVCKLWNNLILSCKFE----SQTDQISNLFFAYSYPYT 76
           +P +++  I S+LP  +    R + K W +++ S  F     +++     L FA      
Sbjct: 4   IPNDLILEIFSRLPAKSVIGFRTLSKHWASMLRSPVFTELFLTRSSNRPRLLFAAE---R 63

Query: 77  NIQCIHLDPIKFNFNFVASFSLHSSWRTKINTSQSHSKVSVQIVNSANGLLCLTKTKTTP 136
           N + +     +    +    S H  + TK +       VS  I +  +GLLC        
Sbjct: 64  NGEWLFFSSPQPQNRY--EKSSHLDYHTKFS-----GDVSRFICSYVSGLLCFP------ 123

Query: 137 RDRDRDRDRHRVGILNPVTNEYIKLPTGDLDRYRYRYCHYGFGFSPVTKEYKIVRNWCRY 196
            D    +D   V I NP T  Y  LP    D  RY+      GF P+ K++K++     +
Sbjct: 124 -DLWLSKDASPV-ICNPTTGMYESLP----DLMRYKNARGFLGFDPIGKQFKVLSEAYPF 183

Query: 197 KTGITIVEIMVFGRSHPQQWQWTSIASPV--RIKSHGVCFNGDLFF 237
                  EI+  G +    W+   I+ P   R  S G+C NG L++
Sbjct: 184 SDQREHHEILTLG-TEELSWRSNIISCPAYDRSLSEGICINGVLYY 206

The following BLAST results are available for this feature:

BLAST of MC05g1022 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFC7	9.7e-07	26.59	F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1	[more]
Q0V7S0	3.7e-06	33.33	F-box protein At1g47340 OS=Arabidopsis thaliana OX=3702 GN=At1g47340 PE=2 SV=1	[more]
Q9C627	4.1e-05	25.44	Putative F-box protein At1g46984 OS=Arabidopsis thaliana OX=3702 GN=At1g46984 PE...	[more]
Q9SI34	1.2e-04	25.00	Putative F-box only protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBX9 PE=4 SV=1	[more]
Q9SVX4	2.7e-04	24.78	F-box protein At3g57590 OS=Arabidopsis thaliana OX=3702 GN=At3g57590 PE=2 SV=1	[more]

BLAST of MC05g1022 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147764.1	2.17e-115	75.63	uncharacterized protein LOC111016621 [Momordica charantia]	[more]
XP_038880514.1	2.75e-44	45.83	putative F-box protein At1g46984 [Benincasa hispida]	[more]
XP_008450717.1	1.32e-40	41.67	PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ...	[more]
XP_004134745.1	3.82e-39	40.00	F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g0787...	[more]
XP_004135796.1	1.07e-38	41.60	putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot...	[more]

BLAST of MC05g1022 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D1Z0	1.05e-115	75.63	uncharacterized protein LOC111016621 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5D3CIX9	6.37e-41	41.67	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3BQV8	6.37e-41	41.67	putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV...	[more]
A0A0A0KJY9	1.85e-39	40.00	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ...	[more]
A0A0A0M1M5	5.20e-39	41.60	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ...	[more]

BLAST of MC05g1022 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07870.1	6.9e-08	26.59	F-box and associated interaction domains-containing protein	[more]
AT1G47340.1	2.6e-07	33.33	F-box and associated interaction domains-containing protein	[more]
AT1G46984.1	2.9e-06	25.44	F-box family protein	[more]
AT2G04920.1	8.5e-06	25.00	F-box and associated interaction domains-containing protein	[more]
AT3G57590.1	1.9e-05	24.78	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 17..57 e-value: 3.2E-9 score: 46.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 15..53 e-value: 7.8E-8 score: 32.0
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 119..236 e-value: 5.7E-13 score: 46.7
None	No IPR available	PANTHER	PTHR47993:SF55	F-BOX PROTEIN	coord: 17..236
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 17..236
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 16..50

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g1022.1	MC05g1022.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding