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MC05g0912 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCAATTGGGATGAACAAATACCTTCTTGAGATATTAAAAGAGTGGAAAGTGAGAGGCCAAAAGTCTGACAGAAATTTCACAAATGATGCGTATCAAGCTGCGGTTGAAGCCTTAAACTCAAAATTTAAAATGGATTTACCCAAGGATAACATCATTAATCGTCTAAAGACTTTGAAAGAAAAAATGGCTATTGGACTTGAAGTCTTTAGACGTGGTAGTGGCCTTACTTGGAATAGCATCTCAGAAACAATTGAAGCAGAG TCAATTGGGATGAACAAATACCTTCTTGAGATATTAAAAGAGTGGAAAGTGAGAGGCCAAAAGTCTGACAGAAATTTCACAAATGATGCGTATCAAGCTGCGGTTGAAGCCTTAAACTCAAAATTTAAAATGGATTTACCCAAGGATAACATCATTAATCGTCTAAAGACTTTGAAAGAAAAAATGGCTATTGGACTTGAAGTCTTTAGACGTGGTAGTGGCCTTACTTGGAATAGCATCTCAGAAACAATTGAAGCAGAG TCAATTGGGATGAACAAATACCTTCTTGAGATATTAAAAGAGTGGAAAGTGAGAGGCCAAAAGTCTGACAGAAATTTCACAAATGATGCGTATCAAGCTGCGGTTGAAGCCTTAAACTCAAAATTTAAAATGGATTTACCCAAGGATAACATCATTAATCGTCTAAAGACTTTGAAAGAAAAAATGGCTATTGGACTTGAAGTCTTTAGACGTGGTAGTGGCCTTACTTGGAATAGCATCTCAGAAACAATTGAAGCAGAG SIGMNKYLLEILKEWKVRGQKSDRNFTNDAYQAAVEALNSKFKMDLPKDNIINRLKTLKEKMAIGLEVFRRGSGLTWNSISETIEAE Homology
BLAST of MC05g0912 vs. NCBI nr
Match: XP_042396818.1 (uncharacterized protein At2g29880-like [Zingiber officinale]) HSP 1 Score: 77.8 bits (190), Expect = 2.39e-15 Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of MC05g0912 vs. NCBI nr
Match: XP_042410069.1 (uncharacterized protein At2g29880-like [Zingiber officinale]) HSP 1 Score: 78.6 bits (192), Expect = 4.11e-15 Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of MC05g0912 vs. NCBI nr
Match: XP_042432681.1 (uncharacterized protein At2g29880-like [Zingiber officinale]) HSP 1 Score: 78.2 bits (191), Expect = 6.23e-15 Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of MC05g0912 vs. NCBI nr
Match: KAG6492854.1 (hypothetical protein ZIOFF_047822 [Zingiber officinale]) HSP 1 Score: 78.6 bits (192), Expect = 1.29e-14 Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of MC05g0912 vs. NCBI nr
Match: XP_042414481.1 (uncharacterized protein LOC122003432 [Zingiber officinale]) HSP 1 Score: 78.2 bits (191), Expect = 1.37e-14 Identity = 38/83 (45.78%), Postives = 58/83 (69.88%), Query Frame = 0
BLAST of MC05g0912 vs. ExPASy TrEMBL
Match: V4LDP6 (Myb_DNA-bind_3 domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028829mg PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 1.83e-10 Identity = 33/87 (37.93%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of MC05g0912 vs. ExPASy TrEMBL
Match: A0A6D2JQC4 (Myb_DNA-bind_3 domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS25608 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.27e-10 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of MC05g0912 vs. ExPASy TrEMBL
Match: A0A3P6B068 (Myb_DNA-bind_3 domain-containing protein OS=Brassica campestris OX=3711 GN=BRAA02T07471Z PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.46e-10 Identity = 33/87 (37.93%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of MC05g0912 vs. ExPASy TrEMBL
Match: A0A3P6DPR1 (Myb_DNA-bind_3 domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC2T09942H PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.55e-10 Identity = 32/87 (36.78%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of MC05g0912 vs. ExPASy TrEMBL
Match: A0A0D2ZTY5 (Myb_DNA-bind_3 domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 GN=106320976 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 3.55e-10 Identity = 32/87 (36.78%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of MC05g0912 vs. TAIR 10
Match: AT4G02550.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 350 Blast hits to 284 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 13; Plants - 331; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 4.2e-11 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of MC05g0912 vs. TAIR 10
Match: AT4G02550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits to 300 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 4.2e-11 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of MC05g0912 vs. TAIR 10
Match: AT4G02550.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 4.2e-11 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of MC05g0912 vs. TAIR 10
Match: AT4G02550.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2). ) HSP 1 Score: 64.7 bits (156), Expect = 4.2e-11 Identity = 33/87 (37.93%), Postives = 52/87 (59.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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