![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MC05g0886 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5CDSpolypeptideutr3 Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGAAAGGTGCGGCATTCTTTTTGGTAAATGAGTTTATTTACGGTTGATTCACTTTTCCCCAAAAAATAAAAAATAAAAAATCTAACCAGCTGGGAAGATATGAACACGCGCGCTCCCCCCGCGCGTGGGGCTTCCATATTCGAATATTGCATAATGCGTCCACCGATGAGGGTTCCCCGAAGTGGACAGGACGTCGTGGACCCCACCTGAGTTGTTCCGCTAAGATTCTCACGCGCGTACACCCCCCCTCTCTCCACACCCACATATTATTTTTTTTTTTTTTAATTTTTTCTTTTTATTTTTCGACCAATATCACAAACCTGAAATCTCCCTCCTCCCCTTAATCTCTCTTCTCTTTTTCTTCTTCTTGTTCTTGTGGTTGTTCTTCTTCTTATTGTTTGATTTAGAATTGTAGTAATGAATACAGGTCCAAATATGGCCACCATTACTGCTGCTTTAGAGAGGTCTCTCCAAAACTGTTCTTTAAGCCATCGTCGTTACGGAGATTCTCATTCTCATTCTCATTCTCATTCTCATTCCTGTGGCGGCACTGCAAATTCAAATTCTTCTTCCAATTCCAATGAAGTTGAAGAAATTAATGTCCACTCTCAAACTACTTTGGATCTCAACTCCCACACCTCCCTCCCTTACCATTGGGAGCAATGCCTCGATTTAAAGGTTCTCTCTTTTTTTTCTTGTTTTTTTTGGTTCAATAAATATGCCATCACTCACCAGATCTTGATTTCATTTTCACCTTTTTAATCTTTAGGGTTTAATTTAATGCCCTCCCTAAAAGAAAAAGAATTAGGGTTTGAAATTTGGAAACCCCAAAAAGGAAAAAGGAAAAAAGAAACCCTTTTCTTCCTTTTCTCTCTCTATGGTCAAAAATCAAATGCTTGCATTTCAATTTTTAGAAAAACCCATTTGTTGCTGTTGGGTTGCCAGAAAAAAGTGGATGAAATTTTAATTTGGGATTTTTTTTTTCTTTTTTTTGGGGTTTTTTGGCAGACAGGGGAGATATACTACATAAACTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCAACAACAGAAGATCAATACAGTGAAGACTACGACGACGACTATTCGGACGACGACGACAGTTCGTATGACAGCGAGGAGTCAAACAACGACAAGAAGGAAGAGGAAAAAGAGAAAGAAGGTGATGTTTTGGTAGTTGCAGGATGCAAGAGCTGCCTCATGTATTTTATGGTGCCAAAACATCTTGAAGATTGCCCTAAATGCACTGGTCAGCTTCTCCATTTTGATCGCTCTGAAAATGACATTATTCCATAAATCCTTTCCATTTTCATTCTCATTTTCCCTTCTCTCTTTCTCTTTCTTTTTTCTTTTTTCTTTTTTTCCTTTGTTTCATGATAAAAATAGAGGAAGAGTGAGAGAGAAAGAGAGGGAAAAAAAAAAAAAAAAACCTCTTTCTTTTGCTTCCATATTGTTTCTATGTGTATTTGTCAGAAAAGGCAGGCAAATGGGGCTGGTTTTGGTTTTAGTTTGAATTCGTTCATTTTTTTTTCTTTGTTTCATAATTTTTCTTTAGATTTCTTTACATTTTGATCTCTAGATTGATAATGGAAGAGATGAGGAATCATGAGATATGGGTGTTCAACTGCAAAAAGAAAAAAAAAGGACTAATAATTTTTGTTGTAGAAAGAAATTAGTCTTGTTATAATTGTTTTATTTAATAAAGTATAG TGGAGAAAGGTGCGGCATTCTTTTTGGTAAATGAGTTTATTTACGGTTGATTCACTTTTCCCCAAAAAATAAAAAATAAAAAATCTAACCAGCTGGGAAGATATGAACACGCGCGCTCCCCCCGCGCGTGGGGCTTCCATATTCGAATATTGCATAATGCGTCCACCGATGAGGGTTCCCCGAAGTGGACAGGACGTCGTGGACCCCACCTGAGTTGTTCCGCTAAGATTCTCACGCGCGTACACCCCCCCTCTCTCCACACCCACATATTATTTTTTTTTTTTTTAATTTTTTCTTTTTATTTTTCGACCAATATCACAAACCTGAAATCTCCCTCCTCCCCTTAATCTCTCTTCTCTTTTTCTTCTTCTTGTTCTTGTGGTTGTTCTTCTTCTTATTGTTTGATTTAGAATTGTAGTAATGAATACAGGTCCAAATATGGCCACCATTACTGCTGCTTTAGAGAGGTCTCTCCAAAACTGTTCTTTAAGCCATCGTCGTTACGGAGATTCTCATTCTCATTCTCATTCTCATTCTCATTCCTGTGGCGGCACTGCAAATTCAAATTCTTCTTCCAATTCCAATGAAGTTGAAGAAATTAATGTCCACTCTCAAACTACTTTGGATCTCAACTCCCACACCTCCCTCCCTTACCATTGGGAGCAATGCCTCGATTTAAAGACAGGGGAGATATACTACATAAACTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCAACAACAGAAGATCAATACAGTGAAGACTACGACGACGACTATTCGGACGACGACGACAGTTCGTATGACAGCGAGGAGTCAAACAACGACAAGAAGGAAGAGGAAAAAGAGAAAGAAGGTGATGTTTTGGTAGTTGCAGGATGCAAGAGCTGCCTCATGTATTTTATGGTGCCAAAACATCTTGAAGATTGCCCTAAATGCACTGGTCAGCTTCTCCATTTTGATCGCTCTGAAAATGACATTATTCCATAAATCCTTTCCATTTTCATTCTCATTTTCCCTTCTCTCTTTCTCTTTCTTTTTTCTTTTTTCTTTTTTTCCTTTGTTTCATGATAAAAATAGAGGAAGAGTGAGAGAGAAAGAGAGGGAAAAAAAAAAAAAAAAACCTCTTTCTTTTGCTTCCATATTGTTTCTATGTGTATTTGTCAGAAAAGGCAGGCAAATGGGGCTGGTTTTGGTTTTAGTTTGAATTCGTTCATTTTTTTTTCTTTGTTTCATAATTTTTCTTTAGATTTCTTTACATTTTGATCTCTAGATTGATAATGGAAGAGATGAGGAATCATGAGATATGGGTGTTCAACTGCAAAAAGAAAAAAAAAGGACTAATAATTTTTGTTGTAGAAAGAAATTAGTCTTGTTATAATTGTTTTATTTAATAAAGTATAG ATGAATACAGGTCCAAATATGGCCACCATTACTGCTGCTTTAGAGAGGTCTCTCCAAAACTGTTCTTTAAGCCATCGTCGTTACGGAGATTCTCATTCTCATTCTCATTCTCATTCTCATTCCTGTGGCGGCACTGCAAATTCAAATTCTTCTTCCAATTCCAATGAAGTTGAAGAAATTAATGTCCACTCTCAAACTACTTTGGATCTCAACTCCCACACCTCCCTCCCTTACCATTGGGAGCAATGCCTCGATTTAAAGACAGGGGAGATATACTACATAAACTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCAACAACAGAAGATCAATACAGTGAAGACTACGACGACGACTATTCGGACGACGACGACAGTTCGTATGACAGCGAGGAGTCAAACAACGACAAGAAGGAAGAGGAAAAAGAGAAAGAAGGTGATGTTTTGGTAGTTGCAGGATGCAAGAGCTGCCTCATGTATTTTATGGTGCCAAAACATCTTGAAGATTGCCCTAAATGCACTGGTCAGCTTCTCCATTTTGATCGCTCTGAAAATGACATTATTCCATAA MNTGPNMATITAALERSLQNCSLSHRRYGDSHSHSHSHSHSCGGTANSNSSSNSNEVEEINVHSQTTLDLNSHTSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTTEDQYSEDYDDDYSDDDDSSYDSEESNNDKKEEEKEKEGDVLVVAGCKSCLMYFMVPKHLEDCPKCTGQLLHFDRSENDIIP Homology
BLAST of MC05g0886 vs. NCBI nr
Match: XP_022932700.1 (rho GTPase-activating protein gacH [Cucurbita moschata]) HSP 1 Score: 222 bits (565), Expect = 2.83e-70 Identity = 133/203 (65.52%), Postives = 145/203 (71.43%), Query Frame = 0
BLAST of MC05g0886 vs. NCBI nr
Match: KAG7029133.1 (hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221 bits (562), Expect = 9.22e-70 Identity = 135/207 (65.22%), Postives = 148/207 (71.50%), Query Frame = 0
BLAST of MC05g0886 vs. NCBI nr
Match: XP_022972321.1 (uncharacterized protein LOC111470894 [Cucurbita maxima] >XP_022972322.1 uncharacterized protein LOC111470894 [Cucurbita maxima]) HSP 1 Score: 218 bits (555), Expect = 7.70e-69 Identity = 134/206 (65.05%), Postives = 145/206 (70.39%), Query Frame = 0
BLAST of MC05g0886 vs. NCBI nr
Match: KAG6597689.1 (hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 219 bits (557), Expect = 8.62e-69 Identity = 134/207 (64.73%), Postives = 148/207 (71.50%), Query Frame = 0
BLAST of MC05g0886 vs. NCBI nr
Match: XP_023540596.1 (histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218 bits (554), Expect = 1.37e-68 Identity = 133/204 (65.20%), Postives = 147/204 (72.06%), Query Frame = 0
BLAST of MC05g0886 vs. ExPASy TrEMBL
Match: A0A6J1F2V9 (rho GTPase-activating protein gacH OS=Cucurbita moschata OX=3662 GN=LOC111439168 PE=4 SV=1) HSP 1 Score: 222 bits (565), Expect = 1.37e-70 Identity = 133/203 (65.52%), Postives = 145/203 (71.43%), Query Frame = 0
BLAST of MC05g0886 vs. ExPASy TrEMBL
Match: A0A6J1I5N3 (uncharacterized protein LOC111470894 OS=Cucurbita maxima OX=3661 GN=LOC111470894 PE=4 SV=1) HSP 1 Score: 218 bits (555), Expect = 3.73e-69 Identity = 134/206 (65.05%), Postives = 145/206 (70.39%), Query Frame = 0
BLAST of MC05g0886 vs. ExPASy TrEMBL
Match: A0A6J1GTR7 (uncharacterized protein LOC111457490 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 SV=1) HSP 1 Score: 209 bits (531), Expect = 1.01e-65 Identity = 128/207 (61.84%), Postives = 141/207 (68.12%), Query Frame = 0
BLAST of MC05g0886 vs. ExPASy TrEMBL
Match: A0A6J1GTV5 (protein Tube-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457490 PE=4 SV=1) HSP 1 Score: 209 bits (531), Expect = 1.45e-65 Identity = 128/216 (59.26%), Postives = 141/216 (65.28%), Query Frame = 0
BLAST of MC05g0886 vs. ExPASy TrEMBL
Match: A0A6J1IQL3 (methionine aminopeptidase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479618 PE=4 SV=1) HSP 1 Score: 207 bits (527), Expect = 4.83e-65 Identity = 127/210 (60.48%), Postives = 141/210 (67.14%), Query Frame = 0
BLAST of MC05g0886 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). ) HSP 1 Score: 168.3 bits (425), Expect = 5.9e-42 Identity = 102/196 (52.04%), Postives = 123/196 (62.76%), Query Frame = 0
BLAST of MC05g0886 vs. TAIR 10
Match: AT2G33510.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). ) HSP 1 Score: 158.3 bits (399), Expect = 6.1e-39 Identity = 102/211 (48.34%), Postives = 123/211 (58.29%), Query Frame = 0
BLAST of MC05g0886 vs. TAIR 10
Match: AT1G28070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 129.8 bits (325), Expect = 2.3e-30 Identity = 89/192 (46.35%), Postives = 115/192 (59.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|