Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAGATGAACTTTTGCAGGAACCTCAAAGATGAAGATATTAGGGAATGGGCAACATTATTCTCATTAATCTCTTCATTCCGGCTCTCGGAAAGAGCAGATATATGGATATGGAACCTTGAAAGAAATGGAAAATATTCTTATCAATCTTTGACTTCAAAAACCTTGTTGCAGGTGTGGGGAACAACAACAACGAGCTCTACAAAATTATCTGGAAGAATTCATGCCCAAAAAAGGTTAAGTTCTTGATTTTGAAACTTAGGCATTCTTGTCTCAACACACATGATCCCCTTCGAAGAATATGCCCCTGGATGGTTTTATCTCTCTAAGCTGGTCTCCTCTTTGCAACAAATCTCAAACACACATCTTCTTCCTTGCGTGCCTCTTTTCATTAAAGGTATGGAGGCACTTTTTCTCTGCCTTTAGCTGGTTGATAATTTTTCCA
mRNA sequence
TGGAAGATGAACTTTTGCAGGAACCTCAAAGATGAAGATATTAGGGAATGGGCAACATTATTCTCATTAATCTCTTCATTCCGGCTCTCGGAAAGAGCAGATATATGGATATGGAACCTTGAAAGAAATGGAAAATATTCTTATCAATCTTTGACTTCAAAAACCTTGTTGCAGGTGTGGGGAACAACAGAGCTCTACAAAATTATCTGGAAGAATTCATGCCCAAAAAAGGTTAAGTTCTTGATTTTGAAACTTAGGCATTCTTGTCTCAACACACATGATCCCCTTCGAAGAATATGCCCCTGGATGGTTTTATCTAGCTGGTCTCCTCTTTGCAACAAATCTCAAACACACATCTTCTTCCTTGCGTGCCTCTTTTCATTAAAGGTATGGAGGCACTTTTTCTCTGCCTTTAGCTGGTTGATAATTTTTCCA
Coding sequence (CDS)
TGGAAGATGAACTTTTGCAGGAACCTCAAAGATGAAGATATTAGGGAATGGGCAACATTATTCTCATTAATCTCTTCATTCCGGCTCTCGGAAAGAGCAGATATATGGATATGGAACCTTGAAAGAAATGGAAAATATTCTTATCAATCTTTGACTTCAAAAACCTTGTTGCAGGTGTGGGGAACAACAGAGCTCTACAAAATTATCTGGAAGAATTCATGCCCAAAAAAGGTTAAGTTCTTGATTTTGAAACTTAGGCATTCTTGTCTCAACACACATGATCCCCTTCGAAGAATATGCCCCTGGATGGTTTTATCTAGCTGGTCTCCTCTTTGCAACAAATCTCAAACACACATCTTCTTCCTTGCGTGCCTCTTTTCATTAAAGGTATGGAGGCACTTTTTCTCTGCCTTTAGCTGGTTGATAATTTTTCCA
Protein sequence
WKMNFCRNLKDEDIREWATLFSLISSFRLSERADIWIWNLERNGKYSYQSLTSKTLLQVWGTTELYKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSSWSPLCNKSQTHIFFLACLFSLKVWRHFFSAFSWLIIFP
Homology
BLAST of MC05g0884 vs. NCBI nr
Match:
VVA20721.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 79.3 bits (194), Expect = 4.90e-14
Identity = 53/139 (38.13%), Postives = 72/139 (51.80%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D IW L+ +G ++ SL S +Q
Sbjct: 301 WDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSH--IQN 360
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNKS 120
G E+ Y IWK P KVK + + LNT D L+R CP++ +S W LCNK+
Sbjct: 361 CGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKA 420
Query: 121 QTHI--FFLACLFSLKVWR 132
+ L C FSLK+W
Sbjct: 421 GDSVDHLLLHCPFSLKLWE 437
BLAST of MC05g0884 vs. NCBI nr
Match:
VVA39726.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 79.3 bits (194), Expect = 5.93e-14
Identity = 53/139 (38.13%), Postives = 72/139 (51.80%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D IW L+ +G ++ SL S +Q
Sbjct: 793 WDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSH--IQN 852
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNKS 120
G E+ Y IWK P KVK + + LNT D L+R CP++ +S W LCNK+
Sbjct: 853 CGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKA 912
Query: 121 QTHI--FFLACLFSLKVWR 132
+ L C FSLK+W
Sbjct: 913 GDSVDHLLLHCPFSLKLWE 929
BLAST of MC05g0884 vs. NCBI nr
Match:
VVA33204.1 (PREDICTED: ribonuclease H [Prunus dulcis])
HSP 1 Score: 77.0 bits (188), Expect = 1.91e-13
Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D W L+ +G ++ SL S +Q
Sbjct: 88 WDFGFRRNLNELEITEAARLLDLLEGVRLITSRLDKRKWKLDPSGLFTCHSLCSH--IQN 147
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNKS 120
G E+ Y IWK P KVK + + LNT D L+R CP++ +S W LCNK+
Sbjct: 148 CGEGEIFSPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKA 207
Query: 121 QTHI--FFLACLFSLKVWR 132
+ L C FSLK+W
Sbjct: 208 GESVDHLLLRCPFSLKLWE 224
BLAST of MC05g0884 vs. NCBI nr
Match:
VVA25489.1 (Hypothetical predicted protein, partial [Prunus dulcis])
HSP 1 Score: 74.3 bits (181), Expect = 3.31e-12
Identity = 53/140 (37.86%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D IW + +G ++ SL S +Q
Sbjct: 793 WDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSLCSH--IQN 852
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNK- 120
G E Y IWK P KVK + + LNT D L+R CP++ +S W LCN
Sbjct: 853 CGEGETFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMA 912
Query: 121 --SQTHIFFLACLFSLKVWR 132
S H+ L C FSLK+W
Sbjct: 913 GDSVNHLL-LHCPFSLKLWE 929
BLAST of MC05g0884 vs. NCBI nr
Match:
BBG98819.1 (VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protein 2 [Prunus dulcis])
HSP 1 Score: 73.9 bits (180), Expect = 4.46e-12
Identity = 52/140 (37.14%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D IW + +G ++ S S +Q
Sbjct: 669 WDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSFCSH--IQN 728
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNK- 120
G E+ Y IWK P KVK + + LNT D L+R CP++ +S W LCN
Sbjct: 729 CGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMA 788
Query: 121 --SQTHIFFLACLFSLKVWR 132
S H+ L C FSLK+W
Sbjct: 789 GDSVNHLL-LHCPFSLKLWE 805
BLAST of MC05g0884 vs. ExPASy TrEMBL
Match:
A0A5E4F237 (zf-RVT domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035192 PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 2.37e-14
Identity = 53/139 (38.13%), Postives = 72/139 (51.80%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D IW L+ +G ++ SL S +Q
Sbjct: 301 WDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSH--IQN 360
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNKS 120
G E+ Y IWK P KVK + + LNT D L+R CP++ +S W LCNK+
Sbjct: 361 CGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKA 420
Query: 121 QTHI--FFLACLFSLKVWR 132
+ L C FSLK+W
Sbjct: 421 GDSVDHLLLHCPFSLKLWE 437
BLAST of MC05g0884 vs. ExPASy TrEMBL
Match:
A0A5E4GJ11 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035891 PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 2.87e-14
Identity = 53/139 (38.13%), Postives = 72/139 (51.80%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D IW L+ +G ++ SL S +Q
Sbjct: 793 WDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKLDPSGLFTCHSLCSH--IQN 852
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNKS 120
G E+ Y IWK P KVK + + LNT D L+R CP++ +S W LCNK+
Sbjct: 853 CGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKA 912
Query: 121 QTHI--FFLACLFSLKVWR 132
+ L C FSLK+W
Sbjct: 913 GDSVDHLLLHCPFSLKLWE 929
BLAST of MC05g0884 vs. ExPASy TrEMBL
Match:
A0A5E4G0J2 (PREDICTED: ribonuclease H OS=Prunus dulcis OX=3755 GN=ALMOND_2B017252 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 9.23e-14
Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D W L+ +G ++ SL S +Q
Sbjct: 88 WDFGFRRNLNELEITEAARLLDLLEGVRLITSRLDKRKWKLDPSGLFTCHSLCSH--IQN 147
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNKS 120
G E+ Y IWK P KVK + + LNT D L+R CP++ +S W LCNK+
Sbjct: 148 CGEGEIFSPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCISPHWCALCNKA 207
Query: 121 QTHI--FFLACLFSLKVWR 132
+ L C FSLK+W
Sbjct: 208 GESVDHLLLRCPFSLKLWE 224
BLAST of MC05g0884 vs. ExPASy TrEMBL
Match:
A0A5E4FED8 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B035166 PE=4 SV=1)
HSP 1 Score: 74.3 bits (181), Expect = 1.60e-12
Identity = 53/140 (37.86%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D IW + +G ++ SL S +Q
Sbjct: 793 WDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSLCSH--IQN 852
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNK- 120
G E Y IWK P KVK + + LNT D L+R CP++ +S W LCN
Sbjct: 853 CGEGETFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMA 912
Query: 121 --SQTHIFFLACLFSLKVWR 132
S H+ L C FSLK+W
Sbjct: 913 GDSVNHLL-LHCPFSLKLWE 929
BLAST of MC05g0884 vs. ExPASy TrEMBL
Match:
A0A4Y1R3V4 (VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1)
HSP 1 Score: 73.9 bits (180), Expect = 2.16e-12
Identity = 52/140 (37.14%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 1 WKMNFCRNLKDEDIREWATLFSLISSFRL-SERADIWIWNLERNGKYSYQSLTSKTLLQV 60
W F RNL + +I E A L L+ RL + R D IW + +G ++ S S +Q
Sbjct: 669 WDFGFRRNLNELEITEVARLLDLLEGVRLFTSRLDKRIWKFDPSGLFTCHSFCSH--IQN 728
Query: 61 WGTTEL---YKIIWKNSCPKKVKFLILKLRHSCLNTHDPLRRICPWMVLSS-WSPLCNK- 120
G E+ Y IWK P KVK + + LNT D L+R CP++ +S W LCN
Sbjct: 729 CGEGEIFPPYTQIWKAKTPLKVKIFVWQAVLGKLNTGDTLQRRCPYLCMSPHWCALCNMA 788
Query: 121 --SQTHIFFLACLFSLKVWR 132
S H+ L C FSLK+W
Sbjct: 789 GDSVNHLL-LHCPFSLKLWE 805
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
VVA20721.1 | 4.90e-14 | 38.13 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
VVA39726.1 | 5.93e-14 | 38.13 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
VVA33204.1 | 1.91e-13 | 37.41 | PREDICTED: ribonuclease H [Prunus dulcis] | [more] |
VVA25489.1 | 3.31e-12 | 37.86 | Hypothetical predicted protein, partial [Prunus dulcis] | [more] |
BBG98819.1 | 4.46e-12 | 37.14 | VIRB2-interacting protein 2 [Prunus dulcis] >BBH09158.1 VIRB2-interacting protei... | [more] |
Match Name | E-value | Identity | Description | |
A0A5E4F237 | 2.37e-14 | 38.13 | zf-RVT domain-containing protein (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2... | [more] |
A0A5E4GJ11 | 2.87e-14 | 38.13 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... | [more] |
A0A5E4G0J2 | 9.23e-14 | 37.41 | PREDICTED: ribonuclease H OS=Prunus dulcis OX=3755 GN=ALMOND_2B017252 PE=4 SV=1 | [more] |
A0A5E4FED8 | 1.60e-12 | 37.86 | Reverse transcriptase domain-containing protein (Fragment) OS=Prunus dulcis OX=3... | [more] |
A0A4Y1R3V4 | 2.16e-12 | 37.14 | VIRB2-interacting protein 2 OS=Prunus dulcis OX=3755 GN=Prudu_008314 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |