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MC05g0868 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGAGCTTCTCTTTGATGATATTTTTAAGATCGAGCGATTAAACCCAGATGGTAAAAAGTTTGATAAAGGTGCGCTTTTGTACAATAGTTACCCTCCTTTTATTTGTATAATCTTTTCAAGGCTTCTTGTTAGCCGACTATGACAATTTTGTTACCATAGATTTGTAAAATCGTTGAATTTCCATCTGATTCCTCTGCAATCATGAAGTTGAGTCTTAGGAGTCTGGCTTAATCAAATTCTTTTAGTGGGTCAGGAAAATGTTTTTGAATCACAGGATGCAAGAATAAGCTTTTTAATCATCTGTTAGTGCCTTTGCAGAGTCAGTTTCCTGCCGTGCCATTAATTTAGACTTTTGTTGGGATGGTTGCAGCTGCAGAACCACTTTTCTGGGAGGATACTTAGTTTGAGGATAGATAGGATTGAGAAACCTCCTGAATGTATACCATATGTTATGGAATGAATGAAAGAGTTGGATGTAGAAATAAGTTTGAATTACTCTGTAATTCTGTTACTAACAAAATGGAAATAGAGTGAGAGAAATGTATGAGGTAAGCATATACGTGAGATGTAAGTTTAGTTACGGTAATGTTGGAAGTCTTTGAAGTGAAAAAGGAGAGCTAACCTCTTGAAAGTTTGTCATGTGCACTACATTTTCTAATGTGCGTTTTATCATGGTACTCTCTGGTCGCAGTTTTCCCTTCATATTAGTTATTCCTTACCAGAAGGAAAAAACTATCTTTTTTTTTTTTGATAAGAAACAAAGAATCCATTGATCTATCAAAAAGGGAGACGACCTAATGGGCAGAGGGTTGAGAAAACCCTCCCCAAAGAAGTTCTAGACAATGGCAGCCTTCCAATTTCTAACTAACGTGTAGGCTATAATACAAAAGAATTTCTTGTGGTTTATAGTCCACCATGAAGCATAATGTTGTACATTACTACGAAAAACCTCCTTGAGGGACTGCTTATCGTTGGAAAGCCTACTATTTCTTATTAGGTTCCCGGTTTTCCCCCTTTTTTGTTGTTTGTTCCATAGAACATTTTTGATTGAGAGATCAATTAGTTAGTGTCCCTCTCCCTCTATTATTCATGTAGTCAATATGATTCTTGGTAATAGGGATTCACGTGTATGGTCCCTTCATCTTGTCTGGTGTTTCACTTGCAAGTCTCTGTAAACTCAATTGGTTTCTTCTTTTCTTTTGGACCCTTCTTTCTTTAAACTTTGGAAGTTGAAAGCTTGTAGAAAATTTGGGTCTTTTTAAACTTGTCACCATTTGAAGGATTGACAACTTTGAATTGGTGTATTCAATGTGCCTTTTGGCTTCTCTATGATGCGGAGTTCGGGCATTTGCAGGATGATAGATAAGTCATTTTGTACCTTCTGTTTTAGGGCGATGGCATTATTTTTGCCACATTTTTTTATATAATTAAAAATTTTGCTATTTTATGGAATATTTGATCGGAAATAAATGGGAGAATGAGATACAGGTTGTGGGAGGAAGTTTGGGGTTGAATTTGAAAGTTAACTTTCCTACTTTGGGAGGTTTAATTTGTCTTTGATGGTTATAACTTATAACTTTGTAACTCTTCTAATAAAATGAAAAGTGTAATTCTTTGTTGAAGAAAAAAGAAACCCAAAATGTCCCTGGCATTGCATTGAATCTTTAGTCTAACAGATTTCTCAAAAACTTGCTCGTAGTTCATAATGCCACTAGAACCTTTTACAAGCTCTCTATGATGTTACTGTATTTCGAACCTTATTCTTTTGTATCTCTGCGCCATGTGGACTTGCAAATTTGCATGCGGAATCTTCTTTTACCTCACCGATATGGATCGACTCTTCTCATCCATTATTTGTCGACTTTGTACAGGTTCCCTTATCCTTCCCCATTTCTATGTCATTTGGAATAATTAATGTCTTACTATGAGCCATGTAAAATTTGTAAAAGAAAAAAACCTTTTCAACAGGTATATACAATTGGCATTTATTTTTTGACAAATTGTCCTACAGTTACTCGAATCGAGGCAAAGAGCGAGAAGTTTGACATGTTCATGCATCTAGATATAAATACAGAAATATACAACTTGAAAGAAGGTGAAAAGTTTTCAATGGCTCTGGCTCCAACTCTGAATCTTGATGGAACCCCTGACACGGGCTATTATCTTCAGGTAACTTGTTCTTCCAATTGTTTATACTCAGAGTCTGTTGAACGCTGGATGTAGAGTAGTATAAGTAAGAAAATTGTTCTTTGGTATAGTGGTTACTGGCTGACTGAAGAATTCTATTGGCCTTCTAGTCGGAAATCACTAGTTTTAAAATATCACTTCGACATGAATAGGTAACAGGGAACTTTCAATCAACTAGGAAATAAATGGAAATTGTATGTCTATTTATTGTCATGACTGGTCTTCCATTGTTTTCTGACAACTATATCTGTACCTTCCTCTGTTCAAATATTAATTTGGTCTTAAAAATTCTCAAAGCCTTGAATACGTTTAATTAAGTATTGCTAGTTTGTGTAACAGGGCAATCGGAAGTCGCTTGCAGACAGATATGAATACATCATGCAAGGGAAGCTGTTTAGAATATCGGAAAGTTCTGGACATGGCGGGAGAGCGTAAGTGCCATAACTTTTCAAAACAATTTTGATTTTGAATACTACATTTGGTGAGTTGTACTGATGAGCCATCAAAGAATCGAGAGCTTGACTTAGCACAAGTTACACTTCCTCTATATTTTAGCAAGAATCTGTCTAGGAGAACTGTCACCTGTCTGTAATGGCTACCATGAGTGCTATCATGGTGGACAAAACTCATTTTATTTATTTTTTCTGAACATTTTAGGAACTTGCATTTTTTCTAGTTGAATTTTGTTATCTTGAAAAAGGTTATTTCATCTGAATCCAGGGAAATAGATGCCTCTTTTGGTGGGCTCCTGATGATGCTTAAGGGGGACCCCTCACATTGCAGCAAGTTTGAGCTTGATCAAAGGCTGTTTCTTCTCATCAGGAAGGTGTGAAGCGCTGTCATTCGAGTCGAACTATGATGATGTACGATAGAAGTTGTGTCATCGCCTGTTCCTATAATAACTGTGTATGTTTAGAAATCTATGTAACCCTTTTACAGTTTCAAGCTATTGGGATCGAATTGAAATCGGGGATCGATGAAAGATTGGGCATGTGATCTATATTTTGAACTAATGAATCATCGCATCAGTCTTGCTATTAATCTAACAATCATAGTTGCGTTGCATTTATGGTG ATGGTTGAGCTTCTCTTTGATGATATTTTTAAGATCGAGCGATTAAACCCAGATGGTAAAAAGTTTGATAAAGTTACTCGAATCGAGGCAAAGAGCGAGAAGTTTGACATGTTCATGCATCTAGATATAAATACAGAAATATACAACTTGAAAGAAGGTGAAAAGTTTTCAATGGCTCTGGCTCCAACTCTGAATCTTGATGGAACCCCTGACACGGGCTATTATCTTCAGGGCAATCGGAAGTCGCTTGCAGACAGATATGAATACATCATGCAAGGGAAGCTGTTTAGAATATCGGAAAGTTCTGGACATGGCGGGAGAGCGGAAATAGATGCCTCTTTTGGTGGGCTCCTGATGATGCTTAAGGGGGACCCCTCACATTGCAGCAAGTTTGAGCTTGATCAAAGGCTGTTTCTTCTCATCAGGAAGGTGTGAAGCGCTGTCATTCGAGTCGAACTATGATGATGTACGATAGAAGTTGTGTCATCGCCTGTTCCTATAATAACTGTGTATGTTTAGAAATCTATGTAACCCTTTTACAGTTTCAAGCTATTGGGATCGAATTGAAATCGGGGATCGATGAAAGATTGGGCATGTGATCTATATTTTGAACTAATGAATCATCGCATCAGTCTTGCTATTAATCTAACAATCATAGTTGCGTTGCATTTATGGTG ATGGTTGAGCTTCTCTTTGATGATATTTTTAAGATCGAGCGATTAAACCCAGATGGTAAAAAGTTTGATAAAGTTACTCGAATCGAGGCAAAGAGCGAGAAGTTTGACATGTTCATGCATCTAGATATAAATACAGAAATATACAACTTGAAAGAAGGTGAAAAGTTTTCAATGGCTCTGGCTCCAACTCTGAATCTTGATGGAACCCCTGACACGGGCTATTATCTTCAGGGCAATCGGAAGTCGCTTGCAGACAGATATGAATACATCATGCAAGGGAAGCTGTTTAGAATATCGGAAAGTTCTGGACATGGCGGGAGAGCGGAAATAGATGCCTCTTTTGGTGGGCTCCTGATGATGCTTAAGGGGGACCCCTCACATTGCAGCAAGTTTGAGCTTGATCAAAGGCTGTTTCTTCTCATCAGGAAGGTGTGA MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINTEIYNLKEGEKFSMALAPTLNLDGTPDTGYYLQGNRKSLADRYEYIMQGKLFRISESSGHGGRAEIDASFGGLLMMLKGDPSHCSKFELDQRLFLLIRKV Homology
BLAST of MC05g0868 vs. ExPASy Swiss-Prot
Match: O81097 (DNA-directed RNA polymerases II and V subunit 8A OS=Arabidopsis thaliana OX=3702 GN=NRPB8A PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 1.6e-52 Identity = 94/141 (66.67%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy Swiss-Prot
Match: Q9M1A8 (DNA-directed RNA polymerases II, IV and V subunit 8B OS=Arabidopsis thaliana OX=3702 GN=NRPB8B PE=1 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.1e-52 Identity = 92/141 (65.25%), Postives = 121/141 (85.82%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy Swiss-Prot
Match: Q54YW8 (DNA-directed RNA polymerases I, II, and III subunit rpabc3 OS=Dictyostelium discoideum OX=44689 GN=polr2h PE=3 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-30 Identity = 64/143 (44.76%), Postives = 97/143 (67.83%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy Swiss-Prot
Match: A8XT81 (Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Caenorhabditis briggsae OX=6238 GN=rpb-8 PE=3 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28 Identity = 63/145 (43.45%), Postives = 93/145 (64.14%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy Swiss-Prot
Match: P52434 (DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Homo sapiens OX=9606 GN=POLR2H PE=1 SV=4) HSP 1 Score: 125.9 bits (315), Expect = 3.6e-28 Identity = 64/148 (43.24%), Postives = 99/148 (66.89%), Query Frame = 0
BLAST of MC05g0868 vs. NCBI nr
Match: XP_022145813.1 (DNA-directed RNA polymerases II and V subunit 8A-like isoform X2 [Momordica charantia] >XP_022145814.1 DNA-directed RNA polymerases II and V subunit 8A-like isoform X2 [Momordica charantia] >XP_022145815.1 DNA-directed RNA polymerases II and V subunit 8A-like isoform X2 [Momordica charantia]) HSP 1 Score: 291 bits (746), Expect = 1.86e-99 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of MC05g0868 vs. NCBI nr
Match: XP_038879439.1 (DNA-directed RNA polymerases II and V subunit 8A-like [Benincasa hispida] >XP_038879448.1 DNA-directed RNA polymerases II and V subunit 8A-like [Benincasa hispida]) HSP 1 Score: 287 bits (734), Expect = 1.26e-97 Identity = 140/144 (97.22%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of MC05g0868 vs. NCBI nr
Match: XP_022932746.1 (DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita moschata] >XP_022932747.1 DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita moschata] >XP_023538873.1 DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita pepo subsp. pepo] >XP_023538874.1 DNA-directed RNA polymerases II and V subunit 8A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 286 bits (733), Expect = 1.79e-97 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of MC05g0868 vs. NCBI nr
Match: XP_004152137.1 (DNA-directed RNA polymerases II and V subunit 8A [Cucumis sativus] >KGN53006.1 hypothetical protein Csa_014470 [Cucumis sativus]) HSP 1 Score: 284 bits (726), Expect = 2.09e-96 Identity = 139/144 (96.53%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of MC05g0868 vs. NCBI nr
Match: XP_008454076.1 (PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like [Cucumis melo]) HSP 1 Score: 283 bits (725), Expect = 2.97e-96 Identity = 138/144 (95.83%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy TrEMBL
Match: A0A6J1CWD5 (DNA-directed RNA polymerases II and V subunit 8A-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015176 PE=3 SV=1) HSP 1 Score: 291 bits (746), Expect = 9.01e-100 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy TrEMBL
Match: A0A6J1EXM3 (DNA-directed RNA polymerases II and V subunit 8A-like OS=Cucurbita moschata OX=3662 GN=LOC111439203 PE=3 SV=1) HSP 1 Score: 286 bits (733), Expect = 8.67e-98 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy TrEMBL
Match: A0A0A0KYV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011050 PE=3 SV=1) HSP 1 Score: 284 bits (726), Expect = 1.01e-96 Identity = 139/144 (96.53%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy TrEMBL
Match: A0A1S3BXS2 (DNA-directed RNA polymerases II and V subunit 8A-like OS=Cucumis melo OX=3656 GN=LOC103494598 PE=3 SV=1) HSP 1 Score: 283 bits (725), Expect = 1.44e-96 Identity = 138/144 (95.83%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of MC05g0868 vs. ExPASy TrEMBL
Match: A0A6J1I8Y6 (DNA-directed RNA polymerases II and V subunit 8A-like OS=Cucurbita maxima OX=3661 GN=LOC111470753 PE=3 SV=1) HSP 1 Score: 283 bits (724), Expect = 2.04e-96 Identity = 139/144 (96.53%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MC05g0868 vs. TAIR 10
Match: AT1G54250.1 (RNA polymerase Rpb8 ) HSP 1 Score: 206.8 bits (525), Expect = 1.1e-53 Identity = 94/141 (66.67%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of MC05g0868 vs. TAIR 10
Match: AT3G59600.1 (RNA polymerase Rpb8 ) HSP 1 Score: 206.5 bits (524), Expect = 1.5e-53 Identity = 92/141 (65.25%), Postives = 121/141 (85.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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