![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MC05g0856 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCGGATAGACCTGGAGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGTAAGTATTGCGCTCTCGATCTCTTTTTCCCAAACAATATATATATAGGAATCTCTAGATGTGCATGAATTTCCACTTCTGATCCTTTAAAGTTTCTCCATCATAGTTCTGTTTGGGTTGCAGGTTATTTTTATTGGGGGAGGAGAAGTATGGGAAAGGAAACTGGAAAGAAATTTCCACAAAAATGGCGGTCACAAAAACATCTACCCAGGTGACCAGCCATGCCCAAAAGTACCACAAGTACAACCAAAACCCTAATTCAAAACAGCGAAATGGGAAGAGCTGCATATCCAAGTCTAGTATTTTCGGCATCACGGCCGTAGATCCCCACTCTATGGCGTGCCTACTTCGCCGTCGTGTTGCACCGGCCGCCATTCAACCACCGTTGACGCTACCGCAGATTCAACAATTTACCATTACCAATTACTTT CCGGATAGACCTGGAGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGTTATTTTTATTGGGGGAGGAGAAGTATGGGAAAGGAAACTGGAAAGAAATTTCCACAAAAATGGCGGTCACAAAAACATCTACCCAGGTGACCAGCCATGCCCAAAAGTACCACAAGTACAACCAAAACCCTAATTCAAAACAGCGAAATGGGAAGAGCTGCATATCCAAGTCTAGTATTTTCGGCATCACGGCCGTAGATCCCCACTCTATGGCGTGCCTACTTCGCCGTCGTGTTGCACCGGCCGCCATTCAACCACCGTTGACGCTACCGCAGATTCAACAATTTACCATTACCAATTACTTT CCGGATAGACCTGGAGCTGAAGAAGCTGGCAGTGGCAATTTACCTGTCAGGCGTTGGACCAAGGACGAACACATGTTATTTTTATTGGGGGAGGAGAAGTATGGGAAAGGAAACTGGAAAGAAATTTCCACAAAAATGGCGGTCACAAAAACATCTACCCAGGTGACCAGCCATGCCCAAAAGTACCACAAGTACAACCAAAACCCTAATTCAAAACAGCGAAATGGGAAGAGCTGCATATCCAAGTCTAGTATTTTCGGCATCACGGCCGTAGATCCCCACTCTATGGCGTGCCTACTTCGCCGTCGTGTTGCACCGGCCGCCATTCAACCACCGTTGACGCTACCGCAGATTCAACAATTTACCATTACCAATTACTTT PDRPGAEEAGSGNLPVRRWTKDEHMLFLLGEEKYGKGNWKEISTKMAVTKTSTQVTSHAQKYHKYNQNPNSKQRNGKSCISKSSIFGITAVDPHSMACLLRRRVAPAAIQPPLTLPQIQQFTITNYF Homology
BLAST of MC05g0856 vs. ExPASy Swiss-Prot
Match: Q9FNN6 (Transcription factor SRM1 OS=Arabidopsis thaliana OX=3702 GN=SRM1 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11 Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy Swiss-Prot
Match: Q8S9H7 (Transcription factor DIVARICATA OS=Antirrhinum majus OX=4151 GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy Swiss-Prot
Match: Q2V9B0 (Transcription factor MYB1R1 OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10 Identity = 44/109 (40.37%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy Swiss-Prot
Match: B8A9B2 (Transcription factor MYBS1 OS=Oryza sativa subsp. indica OX=39946 GN=MYBS1 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.6e-10 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy Swiss-Prot
Match: Q8LH59 (Transcription factor MYBS1 OS=Oryza sativa subsp. japonica OX=39947 GN=MYBS1 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.6e-10 Identity = 34/73 (46.58%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of MC05g0856 vs. NCBI nr
Match: XP_022145147.1 (uncharacterized protein LOC111014661 [Momordica charantia]) HSP 1 Score: 262 bits (670), Expect = 3.66e-86 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of MC05g0856 vs. NCBI nr
Match: XP_022145130.1 (transcription factor DIVARICATA-like [Momordica charantia]) HSP 1 Score: 208 bits (529), Expect = 1.34e-65 Identity = 102/127 (80.31%), Postives = 109/127 (85.83%), Query Frame = 0
BLAST of MC05g0856 vs. NCBI nr
Match: XP_022145143.1 (transcription factor SRM1-like [Momordica charantia]) HSP 1 Score: 84.0 bits (206), Expect = 2.40e-17 Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of MC05g0856 vs. NCBI nr
Match: KAE8692976.1 (Transcription factor DIVARICATA [Hibiscus syriacus]) HSP 1 Score: 84.7 bits (208), Expect = 4.24e-17 Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of MC05g0856 vs. NCBI nr
Match: XP_039012789.1 (transcription factor DIVARICATA-like [Hibiscus syriacus]) HSP 1 Score: 84.0 bits (206), Expect = 1.39e-16 Identity = 44/91 (48.35%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy TrEMBL
Match: A0A6J1CVN6 (uncharacterized protein LOC111014661 OS=Momordica charantia OX=3673 GN=LOC111014661 PE=4 SV=1) HSP 1 Score: 262 bits (670), Expect = 1.77e-86 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy TrEMBL
Match: A0A6J1CTL3 (transcription factor DIVARICATA-like OS=Momordica charantia OX=3673 GN=LOC111014647 PE=4 SV=1) HSP 1 Score: 208 bits (529), Expect = 6.47e-66 Identity = 102/127 (80.31%), Postives = 109/127 (85.83%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy TrEMBL
Match: A0A6J1CV56 (transcription factor SRM1-like OS=Momordica charantia OX=3673 GN=LOC111014658 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.16e-17 Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy TrEMBL
Match: A0A6A2ZN51 (Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110819pilonHSYRG00103 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 2.05e-17 Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of MC05g0856 vs. ExPASy TrEMBL
Match: A0A6A2YB53 (Transcription factor DIVARICATA OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111708pilonHSYRG00243 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 4.71e-16 Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of MC05g0856 vs. TAIR 10
Match: AT5G04760.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 8.6e-13 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of MC05g0856 vs. TAIR 10
Match: AT5G08520.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0
BLAST of MC05g0856 vs. TAIR 10
Match: AT5G58900.1 (Homeodomain-like transcriptional regulator ) HSP 1 Score: 67.4 bits (163), Expect = 9.5e-12 Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of MC05g0856 vs. TAIR 10
Match: AT1G74840.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of MC05g0856 vs. TAIR 10
Match: AT1G74840.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11 Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|