MC05g0308 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0308
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	histone deacetylase complex subunit SAP18
Location	MC05: 2342678 .. 2345758 (-)
RNA-Seq Expression	MC05g0308
Synteny	MC05g0308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTGAAAGTTTATTTTAATTTGTTGATTTTTTGAAAAAGAATCTTACGTGGGCTCATCATAACTGAGGCCCAACTTTCAAGGCCCAAGAATAAGGCATCCGGGCCTCGCTTATAAACTAGCGAAGCTTCCAGAACGAACGGTAGAAGAGAGAGAAAGAGAGTGAGAGAGAAATGGCGGGAGAAGCAGAAGCACCAAGGAGAGCTTATGGCGCTCCTCCGAGAGGCCCTCATGTTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGGTTTCTCTCTCTCCCCTATAATTTTAGGGTTGCTGTCCGTTCCGGCGCCGTATCAGATACATACATTTTTATTTGTTTTGGTGCTCATTAGCTTGTTATAGAATCCATCCTCATCTTCAATCGTTTCGTTGTTTCTTTGCTCTTAAATGTCGTAGAAATTGCAAATTTGTTTTGGGCTAATCATGTTAGGGTGTGCTTTTTCGTTACCTCGTAGTGTACGGAGATGGCTGTGTAAACATAGGTAGTAGCTTTCGATTTCTCTGCTGAATAACCGTGTTCCTCATTTTGCAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTACGTTGTATGAAATTTTGTTTGATTTCTTTGCACATCTGGAAGGAAGCGCGTTTTCAAATTTAGTATGTGATATCGCTTAAAGAACCATAGTTTAATCCAGGAGCTATATCAATAGGGATGGAGTGAAATGCGTTGGCCGCCGACTTAGTGGGAAATGTTCTTTTGTTTATGTCATTGTGATTGTGGTGATAAATAGGATTTAGGAATCGGATGAGAGGATAATTTTAGCAAATTTCTCTGGATTCTGTTGTATATTTAGGTTATCAGGCTAAATGGCTTGTCGATGATCTAGGCTCTCGATTATATACGATGCCCTTATTTGGAATCTTGGATTATGGAAGCATCATTCTCAGGGGCAAAGTGGAGCGACGATGGAAATAGAGGGGGAAATTGCCCTAGTTTCTTCATCTTAGATTAAAAAATTATATTAAAAAGTTAAAGATTTTAGGGGTTTGCTCTAATTTATGTCTCTAATTTTTTTTTTTTATTGAAAGTTTATATATACAAAAACTTGGAAGGTAAAACTTTACCCTCCATGTGAAATGGGTCCGTATGAAACTGACATTAGCTATTATTGCAAAATTTCTGCAGGTTGGGGGTCATCATTTCAATGAAGACTTCGCTGTGAGAGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAGCTAACTGATCTGGTTATATTTCCCATTCTTTTTCAACACTTTCTCCCTGCACGCACTGCATGACATAAATGATCAAACGATCTGTTTCTTTTTTTGACTTTATATCCATGGCTTCATATAATAGAAACTATTTCCCCTTCCATTGCCCTTGAACTTACATTGGGGTGTTACAGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCCAAACTATCTTTTGCTTTGGTGTATCCCGACAGACATGGCCGGTTTGTAGTGAGAGAGGTATCTCTTTCTCTATATGCATGTATACATATATTCGTGATTTCAGGATGGTATATTGGAAAGTATATTCATGATTCTTCGCCCTTTTACTTAGTTGAGTGTTCCAAAATCCAGCCAACAAAACACTCAAAATATGTCCATGACAATACTCGAAGTTCAACAAGAAAACACTGTTACAAATTCAAGCAACAAAGTCCTAACAACAGACCGCACAAGACCAGCCAAACAAATGCTTATAACAGTCACAAAAATCGGTACTCATGAAAATAATCTGTCCAACAATCAGAATGCCACAAATGTCAAGGAAAAAGAAAACGATTGAACTAATGGAGAGTATAATTAATTATTTATTCAAGTCTAGGAATCAATTCAATGAAATTAAACTTGTAAGGATAAATTTGACTCACCCAACTAAATAAATTAAAAGATCCCTATTGTCCGCCTGCATGTATATGACTTGATTGACGGGACAATAGTTCCAGACTGGACTTCTTGATAGTCTTTTAAGTAAGTTTAAGTCTGACGGTTTTTTTGAAAGATGAATAATCCTGCTTCTAGGATGTACTAACACGCTGAACTTGTGCTTACTGCTTACCTTGCATATTAAAGGAGACGACAACTTGGTGTACGATTACATACCAATCTCATGTTTGCTGGATAGAATTAATCTGACTCGAAATGTTTTGTAATGAATCATACTCTCGTTTGCAATTTCTTTTATCGCAGAGAATTGAAGGGCTTGAGTTTGTGATATATTTCATTTCTTGATACATTGCCCGCACTTATTGAGTTTGATTCTTTTTAAAAACTAATTTTCATGTATGAGTTAAGTTCTGAAGAAAGCGAACTACTAGGTTCTGAGTAATCCAGATTTTGTTTCTTCATGTGAAGGTTGGGAAGACATTCTCATTTGGAAATGGACGATTAGACGATAGCTTGGCCTTGGCTGAACTCGGTTTTCAGGTATAACAAACAGGGCTTTTGTTTTTTGTTTTTTTTTTTTGCCATATCTAGGTGCTGAACTAGAAGTTTATTTTTCATGAAGAGTGGCCAAGTTTTATCTTTTTTTTTTTTTAAAAAAAAACTTTGATGTCACTCGAGTCACCCCAGTTGCTATTAAAAAAATAGGGTTAAGATAAATAAAACGTTTTAAGAGTTCAATTCATATACGAAATACGAACTCAAGAGGTATGTCGGTCCTGTATTTCTTCTGATGCTGTATTATTTTTTCCCGTTTTTGCTCAGATTGGAGATTACTTGGATGTGGCAATTTTATAGAGAAGATTGGTGCCTTTACAAGTTTACATGCTAATGGCTATGGTGACTCGTAAAGATATTGTGGGGCATGACTCTTTTCCCCAGTGAATAACAAACGAATGGGGACATAAACATTAGCTTAAATCTCGTAATGTAAACTAATTTCTTGGAAATCCTTGGCATACTTTTCCTTGTTCCCTTGAACTTATTATGTAGAATCATGATAGTCATTAGTGGGATAATTTGAGTTTTCTTTGATAACGGT

mRNA sequence

CGTGAAAGTTTATTTTAATTTGTTGATTTTTTGAAAAAGAATCTTACGTGGGCTCATCATAACTGAGGCCCAACTTTCAAGGCCCAAGAATAAGGCATCCGGGCCTCGCTTATAAACTAGCGAAGCTTCCAGAACGAACGGTAGAAGAGAGAGAAAGAGAGTGAGAGAGAAATGGCGGGAGAAGCAGAAGCACCAAGGAGAGCTTATGGCGCTCCTCCGAGAGGCCCTCATGTTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTTGGGGGTCATCATTTCAATGAAGACTTCGCTGTGAGAGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCCAAACTATCTTTTGCTTTGGTGTATCCCGACAGACATGGCCGGTTTGTAGTGAGAGAGATTTTGTTTCTTCATGTGAAGGTTGGGAAGACATTCTCATTTGGAAATGGACGATTAGACGATAGCTTGGCCTTGGCTGAACTCGGTTTTCAGATTGGAGATTACTTGGATGTGGCAATTTTATAGAGAAGATTGGTGCCTTTACAAGTTTACATGCTAATGGCTATGGTGACTCGTAAAGATATTGTGGGGCATGACTCTTTTCCCCAGTGAATAACAAACGAATGGGGACATAAACATTAGCTTAAATCTCGTAATGTAAACTAATTTCTTGGAAATCCTTGGCATACTTTTCCTTGTTCCCTTGAACTTATTATGTAGAATCATGATAGTCATTAGTGGGATAATTTGAGTTTTCTTTGATAACGGT

Coding sequence (CDS)

ATGGCGGGAGAAGCAGAAGCACCAAGGAGAGCTTATGGCGCTCCTCCGAGAGGCCCTCATGTTCCTCCTCGTCCTCGCTTGGAGCCCGTTGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTTGGGGGTCATCATTTCAATGAAGACTTCGCTGTGAGAGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCCAAACTATCTTTTGCTTTGGTGTATCCCGACAGACATGGCCGGTTTGTAGTGAGAGAGATTTTGTTTCTTCATGTGAAGGTTGGGAAGACATTCTCATTTGGAAATGGACGATTAGACGATAGCTTGGCCTTGGCTGAACTCGGTTTTCAGATTGGAGATTACTTGGATGTGGCAATTTTATAG

Protein sequence

MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL

Homology

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BLAST of MC05g0308 vs. ExPASy Swiss-Prot
Match: O64644 (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2g45640 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.2e-47
Identity = 104/157 (66.24%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 5   AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVR 64
           AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFL 124
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + VRE    
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVRE---- 121

Query: 125 HVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI 155
              VG+T ++ N +  DDS  L+EL F+IGDYLDVAI
Sbjct: 122 ---VGETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of MC05g0308 vs. ExPASy Swiss-Prot
Match: Q3T022 (Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.0e-28
Identity = 68/128 (53.12%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 28  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQI 147
           PEAR++    +FA+V+ D +   + V+EI       G T S G    DDS+ L    FQI
Sbjct: 78  PEARKKGTHFNFAIVFTDLKRPGYRVKEI-------GSTMS-GRKGTDDSMTLQSQKFQI 137

Query: 148 GDYLDVAI 155
           GDYLD+AI
Sbjct: 138 GDYLDIAI 137

[Close]

BLAST of MC05g0308 vs. ExPASy Swiss-Prot
Match: O00422 (Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.0e-28
Identity = 68/128 (53.12%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 28  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQI 147
           PEAR++    +FA+V+ D +   + V+EI       G T S G    DDS+ L    FQI
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEI-------GSTMS-GRKGTDDSMTLQSQKFQI 137

Query: 148 GDYLDVAI 155
           GDYLD+AI
Sbjct: 138 GDYLDIAI 137

[Close]

BLAST of MC05g0308 vs. ExPASy Swiss-Prot
Match: Q5RDT5 (Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.0e-28
Identity = 68/128 (53.12%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 28  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQI 147
           PEAR++    +FA+V+ D +   + V+EI       G T S G    DDS+ L    FQI
Sbjct: 78  PEARKKGTHFNFAIVFTDVKRPGYRVKEI-------GSTMS-GRKGTDDSMTLQSQKFQI 137

Query: 148 GDYLDVAI 155
           GDYLD+AI
Sbjct: 138 GDYLDIAI 137

[Close]

BLAST of MC05g0308 vs. ExPASy Swiss-Prot
Match: O55128 (Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-28
Identity = 68/128 (53.12%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 28  EPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVA 87
           +P+DREKTCPLLLRVFT   G H   D   RG  P  E+QIYTW DATL+ELT LVKEV 
Sbjct: 18  KPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVY 77

Query: 88  PEARRRNAKLSFALVYPD-RHGRFVVREILFLHVKVGKTFSFGNGRLDDSLALAELGFQI 147
           PEAR++    +FA+V+ D +   + V+EI       G T S G    DDS+ L    FQI
Sbjct: 78  PEARKKGTHFNFAIVFMDLKRPGYRVKEI-------GSTMS-GRKGTDDSMTLQSQKFQI 137

Query: 148 GDYLDVAI 155
           GDYLD+AI
Sbjct: 138 GDYLDIAI 137

[Close]

BLAST of MC05g0308 vs. NCBI nr
Match: XP_022147400.1 (histone deacetylase complex subunit SAP18 [Momordica charantia])

HSP 1 Score: 297 bits (760), Expect = 2.46e-101
Identity = 148/155 (95.48%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE      
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE------ 120

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
Sbjct: 121 -VGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 148

[Close]

BLAST of MC05g0308 vs. NCBI nr
Match: XP_031737715.1 (histone deacetylase complex subunit SAP18 isoform X1 [Cucumis sativus])

HSP 1 Score: 292 bits (747), Expect = 3.00e-99
Identity = 143/155 (92.26%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYG PPR  H PPRPRLEPVDREKTCPLLLRVFTK G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGGPPRATHAPPRPRLEPVDREKTCPLLLRVFTKTGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+REILF  V
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLREILFPFV 120

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
           KVGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Sbjct: 121 KVGKTFSFGNRRLDDSLALGELGFQIGDYLDVAII 155

[Close]

BLAST of MC05g0308 vs. NCBI nr
Match: XP_023538738.1 (histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286 bits (732), Expect = 4.57e-97
Identity = 141/155 (90.97%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE      
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE------ 120

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 121 -VGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 148

[Close]

BLAST of MC05g0308 vs. NCBI nr
Match: XP_022943948.1 (histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028645.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286 bits (732), Expect = 1.01e-96
Identity = 141/155 (90.97%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE      
Sbjct: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE------ 143

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 144 -VGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of MC05g0308 vs. NCBI nr
Match: XP_022974173.1 (histone deacetylase complex subunit SAP18-like [Cucurbita maxima])

HSP 1 Score: 286 bits (732), Expect = 1.01e-96
Identity = 141/155 (90.97%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE      
Sbjct: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE------ 143

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 144 -VGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of MC05g0308 vs. ExPASy TrEMBL
Match: A0A6J1D024 (histone deacetylase complex subunit SAP18 OS=Momordica charantia OX=3673 GN=LOC111016339 PE=3 SV=1)

HSP 1 Score: 297 bits (760), Expect = 1.19e-101
Identity = 148/155 (95.48%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE      
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE------ 120

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL
Sbjct: 121 -VGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 148

[Close]

BLAST of MC05g0308 vs. ExPASy TrEMBL
Match: A0A6J1IFF7 (histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LOC111472759 PE=3 SV=1)

HSP 1 Score: 286 bits (732), Expect = 4.88e-97
Identity = 141/155 (90.97%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE      
Sbjct: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE------ 143

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 144 -VGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of MC05g0308 vs. ExPASy TrEMBL
Match: A0A6J1FXI8 (histone deacetylase complex subunit SAP18-like OS=Cucurbita moschata OX=3662 GN=LOC111448519 PE=3 SV=1)

HSP 1 Score: 286 bits (732), Expect = 4.88e-97
Identity = 141/155 (90.97%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR PH PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 24  MAGEAEAPRRAYGAPPRAPHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 83

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE      
Sbjct: 84  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVRE------ 143

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGNGR DD+LALAELGFQIGDYLDVAI+
Sbjct: 144 -VGKTFSFGNGRSDDNLALAELGFQIGDYLDVAII 171

[Close]

BLAST of MC05g0308 vs. ExPASy TrEMBL
Match: A0A5D3D2K7 (Histone deacetylase complex subunit SAP18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004240 PE=3 SV=1)

HSP 1 Score: 281 bits (718), Expect = 3.02e-95
Identity = 139/155 (89.68%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR  H PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+RE      
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLRE------ 120

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Sbjct: 121 -VGKTFSFGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of MC05g0308 vs. ExPASy TrEMBL
Match: A0A1S3AVL4 (histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC103483322 PE=3 SV=1)

HSP 1 Score: 281 bits (718), Expect = 3.02e-95
Identity = 139/155 (89.68%), Postives = 142/155 (91.61%), Query Frame = 0


Query: 1   MAGEAEAPRRAYGAPPRGPHVPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVRGK 60
           MAGEAEAPRRAYGAPPR  H PPRPRLEPVDREKTCPLLLRVFTK+G HHFNEDFAVRGK
Sbjct: 1   MAGEAEAPRRAYGAPPRATHAPPRPRLEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGK 60

Query: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFLHV 120
           EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFV+RE      
Sbjct: 61  EPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVLRE------ 120

Query: 121 KVGKTFSFGNGRLDDSLALAELGFQIGDYLDVAIL 155
            VGKTFSFGN RLDDSLAL ELGFQIGDYLDVAI+
Sbjct: 121 -VGKTFSFGNRRLDDSLALGELGFQIGDYLDVAII 148

[Close]

BLAST of MC05g0308 vs. TAIR 10
Match: AT2G45640.1 (SIN3 associated polypeptide P18 )

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-48
Identity = 104/157 (66.24%), Postives = 120/157 (76.43%), Query Frame = 0


Query: 5   AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVR 64
           AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFL 124
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G + VRE    
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGYNVRE---- 121

Query: 125 HVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI 155
              VG+T ++ N +  DDS  L+EL F+IGDYLDVAI
Sbjct: 122 ---VGETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 151

[Close]

BLAST of MC05g0308 vs. TAIR 10
Match: AT2G45640.2 (SIN3 associated polypeptide P18 )

HSP 1 Score: 184.1 bits (466), Expect = 8.5e-47
Identity = 101/157 (64.33%), Postives = 117/157 (74.52%), Query Frame = 0


Query: 5   AEAPRRAYGA-----PPRGPH-VPPRPRLEPVDREKTCPLLLRVFTKVGGHHFNEDFAVR 64
           AEA RR  G      PPRG +  PPRP+ EPVDREKTCPLLLRVFTK GGHH +ED+AVR
Sbjct: 2   AEAARRQGGGRPLPPPPRGVNQQPPRPKPEPVDREKTCPLLLRVFTKSGGHHTSEDYAVR 61

Query: 65  GKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFVVREILFL 124
           GKEP+DEVQIYTWKDA+LRELTDLVKEV+  ARRRNA+LSFA VYP+  G +        
Sbjct: 62  GKEPKDEVQIYTWKDASLRELTDLVKEVSVAARRRNARLSFAFVYPNNKGGY-------- 121

Query: 125 HVKVGKTFSFGNGRL-DDSLALAELGFQIGDYLDVAI 155
              VG+T ++ N +  DDS  L+EL F+IGDYLDVAI
Sbjct: 122 --NVGETMAYPNRKQPDDSKTLSELPFEIGDYLDVAI 148

The following BLAST results are available for this feature:

BLAST of MC05g0308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64644	2.2e-47	66.24	Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2...	[more]
Q3T022	5.0e-28	53.13	Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV...	[more]
O00422	5.0e-28	53.13	Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 ...	[more]
Q5RDT5	5.0e-28	53.13	Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 ...	[more]
O55128	6.6e-28	53.13	Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1...	[more]

BLAST of MC05g0308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147400.1	2.46e-101	95.48	histone deacetylase complex subunit SAP18 [Momordica charantia]	[more]
XP_031737715.1	3.00e-99	92.26	histone deacetylase complex subunit SAP18 isoform X1 [Cucumis sativus]	[more]
XP_023538738.1	4.57e-97	90.97	histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]	[more]
XP_022943948.1	1.01e-96	90.97	histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180....	[more]
XP_022974173.1	1.01e-96	90.97	histone deacetylase complex subunit SAP18-like [Cucurbita maxima]	[more]

BLAST of MC05g0308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D024	1.19e-101	95.48	histone deacetylase complex subunit SAP18 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1IFF7	4.88e-97	90.97	histone deacetylase complex subunit SAP18-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FXI8	4.88e-97	90.97	histone deacetylase complex subunit SAP18-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3D2K7	3.02e-95	89.68	Histone deacetylase complex subunit SAP18 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3AVL4	3.02e-95	89.68	histone deacetylase complex subunit SAP18 OS=Cucumis melo OX=3656 GN=LOC10348332...	[more]

BLAST of MC05g0308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45640.1	1.5e-48	66.24	SIN3 associated polypeptide P18	[more]
AT2G45640.2	8.5e-47	64.33	SIN3 associated polypeptide P18	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010516	Sin3 associated polypeptide p18	PFAM	PF06487	SAP18	coord: 29..154 e-value: 4.8E-36 score: 124.0
IPR010516	Sin3 associated polypeptide p18	PANTHER	PTHR13082	SAP18	coord: 10..155
IPR042534	Sin3 associated polypeptide p18 superfamily	GENE3D	3.10.20.550	ASAP complex, SAP18 subunit	coord: 22..155 e-value: 6.3E-43 score: 147.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR13082:SF4	DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED	coord: 10..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0308.1	MC05g0308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003714	transcription corepressor activity