MC05g0141 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC05g0141
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC05: 1000785 .. 1000982 (+)
RNA-Seq Expression	MC05g0141
Synteny	MC05g0141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAACGAATTGGCTTCCATTACTTTCTCGCTGGTCACGTCTTCTATCACTCCCAACCACTCTACCAACACTCCATACGCCAAATCCACGATCCCGATTTTTTCACCATTGAAGAACTTCCCCTCGCCGATTCCTTGCTCTTCTAAGATTTGCAGCATCTCTAAGATCTCTCGCTTTGCCTTCTTCTGTTCTTCCCCT

mRNA sequence

GGAAACGAATTGGCTTCCATTACTTTCTCGCTGGTCACGTCTTCTATCACTCCCAACCACTCTACCAACACTCCATACGCCAAATCCACGATCCCGATTTTTTCACCATTGAAGAACTTCCCCTCGCCGATTCCTTGCTCTTCTAAGATTTGCAGCATCTCTAAGATCTCTCGCTTTGCCTTCTTCTGTTCTTCCCCT

Coding sequence (CDS)

GGAAACGAATTGGCTTCCATTACTTTCTCGCTGGTCACGTCTTCTATCACTCCCAACCACTCTACCAACACTCCATACGCCAAATCCACGATCCCGATTTTTTCACCATTGAAGAACTTCCCCTCGCCGATTCCTTGCTCTTCTAAGATTTGCAGCATCTCTAAGATCTCTCGCTTTGCCTTCTTCTGTTCTTCCCCT

Protein sequence

GNELASITFSLVTSSITPNHSTNTPYAKSTIPIFSPLKNFPSPIPCSSKICSISKISRFAFFCSSP

Homology

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BLAST of MC05g0141 vs. NCBI nr
Match: CBI37230.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 48.1 bits (113), Expect = 8.91e-05
Identity = 33/66 (50.00%), Postives = 38/66 (57.58%), Query Frame = 0


Query: 1   GNELASITFSLVTSSITPNHSTNTPYAKSTIPIFSPLKNFPSPIPCSSKICSISKISRFA 60
           GN  +SI+F+   SS+  +H    P A S  PI SP KNF SP PCSS I S S  S  A
Sbjct: 43  GNLSSSISFTPTASSMVLSHPAIHPKAMSANPISSPPKNFFSPRPCSSMILSSSLASFTA 102

Query: 61  FFCSSP 66
             CSSP
Sbjct: 103 LSCSSP 108

The following BLAST results are available for this feature:

BLAST of MC05g0141 vs.


Match Name	E-value	Identity	Description

BLAST of MC05g0141 vs. NCBI nr


Match Name	E-value	Identity	Description
CBI37230.3	8.91e-05	50.00	unnamed protein product, partial [Vitis vinifera]	[more]

BLAST of MC05g0141 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MC05g0141 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC05g0141.1	MC05g0141.1	mRNA