MC05g0041 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC05g0041
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionStAR lipid transfer-like protein
LocationMC05: 348723 .. 348956 (-)
RNA-Seq ExpressionMC05g0041
SyntenyMC05g0041
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCGGAGAGACAAATGGAGGATAACGGAGGAGACGGTGGTAGCAACGCCCACTGGTGGTGGGCTTTGGCCGGCGCAACTCAATTTGGTTGGGGAATAGCCTCTTTCAGGCGAGGATTCATCGGCAATTCTAGCCTCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCCGCCGCCTCATCCGCCATCGCTTCCCTCAAAGCCTCCGGCATTCACAAGGTC

mRNA sequence

AAACCGGAGAGACAAATGGAGGATAACGGAGGAGACGGTGGTAGCAACGCCCACTGGTGGTGGGCTTTGGCCGGCGCAACTCAATTTGGTTGGGGAATAGCCTCTTTCAGGCGAGGATTCATCGGCAATTCTAGCCTCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCCGCCGCCTCATCCGCCATCGCTTCCCTCAAAGCCTCCGGCATTCACAAGGTC

Coding sequence (CDS)

AAACCGGAGAGACAAATGGAGGATAACGGAGGAGACGGTGGTAGCAACGCCCACTGGTGGTGGGCTTTGGCCGGCGCAACTCAATTTGGTTGGGGAATAGCCTCTTTCAGGCGAGGATTCATCGGCAATTCTAGCCTCATGCCCTTTAAGGCCTTCGCCGTTGCTTCGCTTTTCGTCGGCGCCGCCGCCTCATCCGCCATCGCTTCCCTCAAAGCCTCCGGCATTCACAAGGTC

Protein sequence

KPERQMEDNGGDGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAASSAIASLKASGIHKV
Homology
BLAST of MC05g0041 vs. NCBI nr
Match: XP_022145350.1 (uncharacterized protein LOC111014824 [Momordica charantia])

HSP 1 Score: 147 bits (370), Expect = 5.75e-44
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 6  MEDNGGDGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAASS 65
          MEDNGGDGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAASS
Sbjct: 1  MEDNGGDGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAASS 60

Query: 66 AIASLKASGIHKV 78
          AIASLKASGIHKV
Sbjct: 61 AIASLKASGIHKV 73

BLAST of MC05g0041 vs. NCBI nr
Match: XP_022941577.1 (uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata] >KAG7028515.1 hypothetical protein SDJN02_09696, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137 bits (344), Expect = 1.24e-39
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 0

Query: 3   ERQMEDNGG-DGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGA 62
           ER+M +NGG DGGSNAHWWWALAGATQFGWGIASFRRG IG+SSLMPFKAFAVASLFVGA
Sbjct: 25  EREMVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 84

Query: 63  AASSAIASLKASGIHKV 78
           AASSAIASLKA+GIHKV
Sbjct: 85  AASSAIASLKAAGIHKV 101

BLAST of MC05g0041 vs. NCBI nr
Match: XP_023540026.1 (uncharacterized protein LOC111800524 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134 bits (338), Expect = 5.23e-39
Identity = 69/77 (89.61%), Postives = 73/77 (94.81%), Query Frame = 0

Query: 3  ERQMEDNGG-DGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGA 62
          +R M +NGG DGGSNAHWWWALAGATQFGWGIASFRRG IG+SSLMPFKAFAVASLFVGA
Sbjct: 3  KRDMVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 62

Query: 63 AASSAIASLKASGIHKV 78
          AASSAIASLKA+GIHKV
Sbjct: 63 AASSAIASLKAAGIHKV 79

BLAST of MC05g0041 vs. NCBI nr
Match: XP_022941569.1 (uncharacterized protein LOC111446882 isoform X1 [Cucurbita moschata])

HSP 1 Score: 135 bits (340), Expect = 7.48e-39
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 0

Query: 3   ERQMEDNGG-DGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGA 62
           ER+M +NGG DGGSNAHWWWALAGATQFGWGIASFRRG IG+SSLMPFKAFAVASLFVGA
Sbjct: 25  EREMVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 84

Query: 63  AASSAIASLKASGIHK 77
           AASSAIASLKA+GIHK
Sbjct: 85  AASSAIASLKAAGIHK 100

BLAST of MC05g0041 vs. NCBI nr
Match: KAG6597040.1 (hypothetical protein SDJN03_10220, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133 bits (334), Expect = 1.84e-38
Identity = 66/73 (90.41%), Postives = 70/73 (95.89%), Query Frame = 0

Query: 6  MEDNGGDGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAASS 65
          +E+ G DGGSNAHWWWALAGATQFGWGIASFRRG IG+SSLMPFKAFAVASLFVGAAASS
Sbjct: 2  VENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGAAASS 61

Query: 66 AIASLKASGIHKV 78
          AIASLKA+GIHKV
Sbjct: 62 AIASLKAAGIHKV 74

BLAST of MC05g0041 vs. ExPASy TrEMBL
Match: A0A6J1CU84 (uncharacterized protein LOC111014824 OS=Momordica charantia OX=3673 GN=LOC111014824 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 2.79e-44
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query: 6  MEDNGGDGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAASS 65
          MEDNGGDGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAASS
Sbjct: 1  MEDNGGDGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGAAASS 60

Query: 66 AIASLKASGIHKV 78
          AIASLKASGIHKV
Sbjct: 61 AIASLKASGIHKV 73

BLAST of MC05g0041 vs. ExPASy TrEMBL
Match: A0A6J1FMU0 (uncharacterized protein LOC111446882 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446882 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 6.01e-40
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 0

Query: 3   ERQMEDNGG-DGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGA 62
           ER+M +NGG DGGSNAHWWWALAGATQFGWGIASFRRG IG+SSLMPFKAFAVASLFVGA
Sbjct: 25  EREMVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 84

Query: 63  AASSAIASLKASGIHKV 78
           AASSAIASLKA+GIHKV
Sbjct: 85  AASSAIASLKAAGIHKV 101

BLAST of MC05g0041 vs. ExPASy TrEMBL
Match: A0A6J1FNT4 (uncharacterized protein LOC111446882 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446882 PE=4 SV=1)

HSP 1 Score: 135 bits (340), Expect = 3.62e-39
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 0

Query: 3   ERQMEDNGG-DGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGA 62
           ER+M +NGG DGGSNAHWWWALAGATQFGWGIASFRRG IG+SSLMPFKAFAVASLFVGA
Sbjct: 25  EREMVENGGSDGGSNAHWWWALAGATQFGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 84

Query: 63  AASSAIASLKASGIHK 77
           AASSAIASLKA+GIHK
Sbjct: 85  AASSAIASLKAAGIHK 100

BLAST of MC05g0041 vs. ExPASy TrEMBL
Match: A0A6J1IIU1 (uncharacterized protein LOC111473617 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474468 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 1.41e-38
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 0

Query: 3   ERQMEDNGG-DGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFVGA 62
           ER+M +NGG DGGSNAHWWWALAGATQ GWGIASFRRG IG+SSLMPFKAFAVASLFVGA
Sbjct: 25  EREMVENGGSDGGSNAHWWWALAGATQLGWGIASFRRGVIGDSSLMPFKAFAVASLFVGA 84

Query: 63  AASSAIASLKASGIHKV 78
           A+SSAIASLKA+GIHKV
Sbjct: 85  ASSSAIASLKAAGIHKV 101

BLAST of MC05g0041 vs. ExPASy TrEMBL
Match: A0A1S3AUW2 (uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 2.93e-38
Identity = 67/79 (84.81%), Postives = 72/79 (91.14%), Query Frame = 0

Query: 1   KPERQMEDNGG-DGGSNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFV 60
           K E++ME+NGG DGGSNAHWWWA AGA Q GWGIASFRRGF+G+SS MP KAFAVASLFV
Sbjct: 24  KAEKEMEENGGSDGGSNAHWWWAFAGAGQLGWGIASFRRGFVGDSSTMPLKAFAVASLFV 83

Query: 61  GAAASSAIASLKASGIHKV 78
           GAAASSAIASLKASGIHKV
Sbjct: 84  GAAASSAIASLKASGIHKV 102

BLAST of MC05g0041 vs. TAIR 10
Match: AT3G60480.1 (unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 4.8e-14
Identity = 39/79 (49.37%), Postives = 49/79 (62.03%), Query Frame = 0

Query: 7  EDNGGDGG-------SNAHWWWALAGATQFGWGIASFRRGFIGNSSLMPFKAFAVASLFV 66
          E N G G         + HWWWAL    Q  WGI   RRG+ G+  LMP KAF VASLFV
Sbjct: 3  EQNAGTGAGESSLLDGSGHWWWALGSGAQIMWGIRLIRRGYAGDVRLMPLKAFGVASLFV 62

Query: 67 GAAASSAIASLKASGIHKV 79
          G+ A+S++A ++A+GIH V
Sbjct: 63 GSLATSSVALVRATGIHTV 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022145350.15.75e-44100.00uncharacterized protein LOC111014824 [Momordica charantia][more]
XP_022941577.11.24e-3990.91uncharacterized protein LOC111446882 isoform X2 [Cucurbita moschata] >KAG7028515... [more]
XP_023540026.15.23e-3989.61uncharacterized protein LOC111800524 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022941569.17.48e-3990.79uncharacterized protein LOC111446882 isoform X1 [Cucurbita moschata][more]
KAG6597040.11.84e-3890.41hypothetical protein SDJN03_10220, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1CU842.79e-44100.00uncharacterized protein LOC111014824 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1FMU06.01e-4090.91uncharacterized protein LOC111446882 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FNT43.62e-3990.79uncharacterized protein LOC111446882 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1IIU11.41e-3888.31uncharacterized protein LOC111473617 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3AUW22.93e-3884.81uncharacterized protein LOC103483131 OS=Cucumis melo OX=3656 GN=LOC103483131 PE=... [more]
Match NameE-valueIdentityDescription
AT3G60480.14.8e-1449.37unknown protein; Has 17 Blast hits to 17 proteins in 8 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37744STAR LIPID TRANSFER-LIKE PROTEINcoord: 7..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC05g0041.1MC05g0041.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane