MC04g_new0040 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g_new0040
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 1476737 .. 1477102 (+)
RNA-Seq ExpressionMC04g_new0040
SyntenyMC04g_new0040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCCAGTCGAAGAGAAGAATATTGTGACACGTAAAGAAGAAGAGGCGAGAGTGATGATCCTGATCAGGATCATCACCGCCATGATCACGATCATCTTCATGATCAAGCGGATGGAAAAAGATATAAATGTGGGACCCATCTTTGACGCCACAATCAACGAGCGAGAATCCATCATCGTCCTTACTGATCGGTCGGCCAGGGTTGTCGTCGGCGATGAAGATCAGACGGTCAGAAGGGAGGTCGTTGTTGTGGTGGGCACTGATCTCGGCCTTAAGATCAGACACGGTGGCGTCGTCTTTGACCTGAATGTGGAACAGAGAACCGGTCAAGTTTTCCACCGCCAGCTTCATCCCGGCCTTTAA

mRNA sequence

ATGGTTCCAGTCGAAGAGAAGAATATTGTGACACGTAAAGAAGAAGAGGCGAGAGTGATGATCCTGATCAGGATCATCACCGCCATGATCACGATCATCTTCATGATCAAGCGGATGGAAAAAGATATAAATGTGGGACCCATCTTTGACGCCACAATCAACGAGCGAGAATCCATCATCGTCCTTACTGATCGGTCGGCCAGGGTTGTCGTCGGCGATGAAGATCAGACGGTCAGAAGGGAGGTCGTTGTTGTGGTGGGCACTGATCTCGGCCTTAAGATCAGACACGGTGGCGTCGTCTTTGACCTGAATGTGGAACAGAGAACCGGTCAAGTTTTCCACCGCCAGCTTCATCCCGGCCTTTAA

Coding sequence (CDS)

ATGGTTCCAGTCGAAGAGAAGAATATTGTGACACGTAAAGAAGAAGAGGCGAGAGTGATGATCCTGATCAGGATCATCACCGCCATGATCACGATCATCTTCATGATCAAGCGGATGGAAAAAGATATAAATGTGGGACCCATCTTTGACGCCACAATCAACGAGCGAGAATCCATCATCGTCCTTACTGATCGGTCGGCCAGGGTTGTCGTCGGCGATGAAGATCAGACGGTCAGAAGGGAGGTCGTTGTTGTGGTGGGCACTGATCTCGGCCTTAAGATCAGACACGGTGGCGTCGTCTTTGACCTGAATGTGGAACAGAGAACCGGTCAAGTTTTCCACCGCCAGCTTCATCCCGGCCTTTAA

Protein sequence

MVPVEEKNIVTRKEEEARVMILIRIITAMITIIFMIKRMEKDINVGPIFDATINERESIIVLTDRSARVVVGDEDQTVRREVVVVVGTDLGLKIRHGGVVFDLNVEQRTGQVFHRQLHPGL
Homology
[Close]
BLAST of MC04g_new0040 vs. NCBI nr
Match: KAA0065094.1 (kinesin-like protein KIN-4C [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 3.11e-04
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0 

Query: 51  ATINERESIIVLTDRSARVVVGDEDQTVRREVVVVVGTDLGLKIRHGGVVFDLNVEQRTG 110
           A INER+ II   D +  ++VG+EDQ VRREV +V   DL   I +GG+VF+L+ EQR  
Sbjct: 3   AKINERDFII---DETFEIMVGNEDQMVRREVALV-SNDLSSNITNGGIVFNLDEEQRVQ 61

Query: 111 QVF 113
             F
Sbjct: 63  SNF 61

[Close]
BLAST of MC04g_new0040 vs. ExPASy TrEMBL
Match: A0A5A7VCT7 (Kinesin-like protein KIN-4C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004270 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.51e-04
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0 

Query: 51  ATINERESIIVLTDRSARVVVGDEDQTVRREVVVVVGTDLGLKIRHGGVVFDLNVEQRTG 110
           A INER+ II   D +  ++VG+EDQ VRREV +V   DL   I +GG+VF+L+ EQR  
Sbjct: 3   AKINERDFII---DETFEIMVGNEDQMVRREVALV-SNDLSSNITNGGIVFNLDEEQRVQ 61

Query: 111 QVF 113
             F
Sbjct: 63  SNF 61

The following BLAST results are available for this feature:
BLAST of MC04g_new0040 vs.
Match NameE-valueIdentityDescription
BLAST of MC04g_new0040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065094.13.11e-0449.21kinesin-like protein KIN-4C [Cucumis melo var. makuwa][more]
BLAST of MC04g_new0040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VCT71.51e-0449.21Kinesin-like protein KIN-4C OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
BLAST of MC04g_new0040 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g_new0040.1MC04g_new0040.1mRNA