MC04g_new0030 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g_new0030
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 1349394 .. 1350167 (-)
RNA-Seq ExpressionMC04g_new0030
SyntenyMC04g_new0030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTACTCCACGCGCATTGGTTGAGAGGACCCACCATCCCAGTTACCAACAAAGAACTCGCACTTCACCAGCAACTTCACTCTGCCAACCCAGATCCCAATTCTTCTCTCTATATATTTAACACCCAAAATCCAAAATCCCCACAAAATTTCTCACATCATTTGGAAATGGAAATCCCAATGGCCAAAATTTACCTTATTTGCTTAATCTTAGTCGAGATGTTGGTGATTGAAGCAATGGGTGGAGATGATTCGGAGAGATCAGAAGTAGAACTGGCGCCGAGCCCATCGGAGATCAGACGGCTGGGAAAGCACCACGCCGATAAGTCGGTGGCCGGCGGCGGAGTCATCATCGGCGGCCTTGTCACCGCTATCTTTGCGGCCGTTTTTTGTTACATTCGGGTCACTAGAAAAAGAGATGGCATTGATGCAGTTCGCTGAGATCAGATCAGATGGATCCTAATTTTGCCCACCCCAATCTCCCTCTCTCATACATACTTCTGATTATTTTTATTTTTAAGTTTTAGAATAGGAAAGAAGAAGAATCTGGAGATTGTTGTGTACTGTTTGGTCTGAATATAAAAAATCGACTGTTCATATAGTGAAGAAGCTCCCAGTTCAAAATTATTTGTTGGGTTTTTGTTAAGCTGTTGATAAATTATTAAAATTGGTGTAAAATAAACTTTTGAATCCATCATTTTTTGGAATCCGTGTTTTATTTCCTCTCCAACCACTTCTTGGTCAAGCCTACCACCAGCGAGAAAAGAGTAGGGTT

mRNA sequence

ATGGAAATCCCAATGGCCAAAATTTACCTTATTTGCTTAATCTTAGTCGAGATGTTGGTGATTGAAGCAATGGGTGGAGATGATTCGGAGAGATCAGAAGTAGAACTGGCGCCGAGCCCATCGGAGATCAGACGGCTGGGAAAGCACCACGCCGATAAGTCGGTGGCCGGCGGCGGAGTCATCATCGGCGGCCTTGTCACCGCTATCTTTGCGGCCGTTTTTTGTTACATTCGGGTCACTAGAAAAAGAGATGGCATTGATGCAGTTCGCTGA

Coding sequence (CDS)

ATGGAAATCCCAATGGCCAAAATTTACCTTATTTGCTTAATCTTAGTCGAGATGTTGGTGATTGAAGCAATGGGTGGAGATGATTCGGAGAGATCAGAAGTAGAACTGGCGCCGAGCCCATCGGAGATCAGACGGCTGGGAAAGCACCACGCCGATAAGTCGGTGGCCGGCGGCGGAGTCATCATCGGCGGCCTTGTCACCGCTATCTTTGCGGCCGTTTTTTGTTACATTCGGGTCACTAGAAAAAGAGATGGCATTGATGCAGTTCGCTGA

Protein sequence

MEIPMAKIYLICLILVEMLVIEAMGGDDSERSEVELAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAVR
Homology
BLAST of MC04g_new0030 vs. NCBI nr
Match: KAG6572323.1 (hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 112 bits (281), Expect = 4.02e-30
Identity = 63/100 (63.00%), Postives = 72/100 (72.00%), Query Frame = 0

Query: 5   MAKIYLICLILVEMLVIEAMGGD-DSERSEVELAPSPSE--------------IRRLGKH 64
           MAKI L+CLIL ++L+I+AM     +  S V  AP PSE              IRRLGKH
Sbjct: 1   MAKISLLCLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKH 60

Query: 65  HADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV 89
           H DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+D+V
Sbjct: 61  HVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV 100

BLAST of MC04g_new0030 vs. NCBI nr
Match: KAG7011935.1 (hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 108 bits (271), Expect = 1.34e-28
Identity = 62/100 (62.00%), Postives = 71/100 (71.00%), Query Frame = 0

Query: 5   MAKIYLICLILVEMLVIEAMGGD-DSERSEVELAPSPSE--------------IRRLGKH 64
           MAKI L+ LIL ++L+I+AM     +  S V  AP PSE              IRRLGKH
Sbjct: 1   MAKISLLSLILAQILLIQAMASTATTTTSHVSAAPEPSETDNVEGPGLAEAPEIRRLGKH 60

Query: 65  HADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV 89
           H DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+D+V
Sbjct: 61  HVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV 100

BLAST of MC04g_new0030 vs. NCBI nr
Match: KAA0031619.1 (hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa] >TYK07071.1 hypothetical protein E5676_scaffold13G003890 [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (250), Expect = 2.16e-25
Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 5   MAKIYLI-CLILVEMLVIEAMGG----------------DDSERSEVELAPSPSEIRRLG 64
           MAK  L+ CLI+ E+L+I+AM                  +   R   ++A +P EIRRLG
Sbjct: 1   MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAP-EIRRLG 60

Query: 65  KHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV 89
           KHH DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDG+D+V
Sbjct: 61  KHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSV 101

BLAST of MC04g_new0030 vs. NCBI nr
Match: KDP32228.1 (hypothetical protein JCGZ_13835 [Jatropha curcas])

HSP 1 Score: 90.5 bits (223), Expect = 2.68e-21
Identity = 56/100 (56.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 5  MAKIYLI--CLILVEMLVIEAMGGDDSERSEVELAPSP------------SEIRRLGKHH 64
          MA++ L+  CLIL  +L+++A   D+SE+    +A  P             EIRRLGKHH
Sbjct: 1  MARLRLVISCLILAGILIVQATA-DESEKKSPSVADQPVASSHEWEEAEAPEIRRLGKHH 60

Query: 65 A-DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV 89
          + DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK+   D V
Sbjct: 61 SSDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKKGSDDLV 99

BLAST of MC04g_new0030 vs. NCBI nr
Match: KAE8075791.1 (hypothetical protein FH972_014479 [Carpinus fangiana])

HSP 1 Score: 90.9 bits (224), Expect = 3.10e-21
Identity = 54/114 (47.37%), Postives = 67/114 (58.77%), Query Frame = 0

Query: 5   MAKIYLICLILVEMLVIEAM--------------------------------GGDDSERS 64
           M ++ L+C ILVE+LV++AM                                  + S   
Sbjct: 1   MGRLGLVCFILVEILVVQAMVAKSEASEQNPSGIKVGTLGVVSRIADQPVSSAAESSSEG 60

Query: 65  EVE--LAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD 84
           E +  LA +P+ IRRLGKHH+DKSVAGGGVIIGGLVT +FAAVFCYIRVTR+RD
Sbjct: 61  EGDSKLAEAPTMIRRLGKHHSDKSVAGGGVIIGGLVTVVFAAVFCYIRVTRRRD 114

BLAST of MC04g_new0030 vs. ExPASy TrEMBL
Match: A0A5D3C590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003890 PE=4 SV=1)

HSP 1 Score: 100 bits (250), Expect = 1.05e-25
Identity = 60/102 (58.82%), Postives = 71/102 (69.61%), Query Frame = 0

Query: 5   MAKIYLI-CLILVEMLVIEAMGG----------------DDSERSEVELAPSPSEIRRLG 64
           MAK  L+ CLI+ E+L+I+AM                  +   R   ++A +P EIRRLG
Sbjct: 1   MAKTCLLFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKGTREGSDVAEAP-EIRRLG 60

Query: 65  KHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV 89
           KHH DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDG+D+V
Sbjct: 61  KHHGDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSV 101

BLAST of MC04g_new0030 vs. ExPASy TrEMBL
Match: A0A0A0K3N0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1)

HSP 1 Score: 100 bits (248), Expect = 2.17e-25
Identity = 57/102 (55.88%), Postives = 72/102 (70.59%), Query Frame = 0

Query: 5   MAKIYLI-CLILVEMLVIEAMGGDDSERSEVELAPSPS----------------EIRRLG 64
           MAKI L+ CLI+ E+ +I+A+    +  +E+ L+ +P                 EIRRLG
Sbjct: 1   MAKICLLFCLIVGEIFLIQAITTSIATTTELPLSVAPESSEKGTREGSEVAEAPEIRRLG 60

Query: 65  KHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV 89
           KHH DKS+AGGGVIIGGLVTA+FAAVFCYIRVTRKRDG+D+V
Sbjct: 61  KHHGDKSMAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV 102

BLAST of MC04g_new0030 vs. ExPASy TrEMBL
Match: A0A067KB75 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13835 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.30e-21
Identity = 56/100 (56.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 5  MAKIYLI--CLILVEMLVIEAMGGDDSERSEVELAPSP------------SEIRRLGKHH 64
          MA++ L+  CLIL  +L+++A   D+SE+    +A  P             EIRRLGKHH
Sbjct: 1  MARLRLVISCLILAGILIVQATA-DESEKKSPSVADQPVASSHEWEEAEAPEIRRLGKHH 60

Query: 65 A-DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGIDAV 89
          + DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK+   D V
Sbjct: 61 SSDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKKGSDDLV 99

BLAST of MC04g_new0030 vs. ExPASy TrEMBL
Match: A0A5N6RDG0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014479 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.50e-21
Identity = 54/114 (47.37%), Postives = 67/114 (58.77%), Query Frame = 0

Query: 5   MAKIYLICLILVEMLVIEAM--------------------------------GGDDSERS 64
           M ++ L+C ILVE+LV++AM                                  + S   
Sbjct: 1   MGRLGLVCFILVEILVVQAMVAKSEASEQNPSGIKVGTLGVVSRIADQPVSSAAESSSEG 60

Query: 65  EVE--LAPSPSEIRRLGKHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRD 84
           E +  LA +P+ IRRLGKHH+DKSVAGGGVIIGGLVT +FAAVFCYIRVTR+RD
Sbjct: 61  EGDSKLAEAPTMIRRLGKHHSDKSVAGGGVIIGGLVTVVFAAVFCYIRVTRRRD 114

BLAST of MC04g_new0030 vs. ExPASy TrEMBL
Match: A5BAN6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_044272 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.61e-21
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0

Query: 5  MAKIYLICLILVEMLVIEAMGGD---DSERSEVELAPSPS--------EI------RRLG 64
          M ++ L+CL+L E+LV++A+ G    D   S V +A  PS        E+      RRLG
Sbjct: 1  MGRLILVCLLLAEILVVQALAGGSGXDPLGSVVRVADQPSPGGGXESLEVAEAPANRRLG 60

Query: 65 KHHADKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKR 83
          KHH D+S+AGGGVIIGGL TAIFAAVFCYIR+TR+R
Sbjct: 61 KHHVDRSIAGGGVIIGGLATAIFAAVFCYIRITRRR 96

BLAST of MC04g_new0030 vs. TAIR 10
Match: AT3G09280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-08
Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = 0

Query: 26 GDDSERSEVELAPSPSEIRRLGKHHA--DKSVAGGGVIIGGLVTAIFAAVFCYIRVTRK 83
          G+++E  EV       E  R G HH+  ++SVAGGGVI+GGL T     VFCYIR TRK
Sbjct: 40 GEEAEAPEVS---HLEETVRRGHHHSTVERSVAGGGVILGGLATTFLVVVFCYIRATRK 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6572323.14.02e-3063.00hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7011935.11.34e-2862.00hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0031619.12.16e-2558.82hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa] >TYK070... [more]
KDP32228.12.68e-2156.00hypothetical protein JCGZ_13835 [Jatropha curcas][more]
KAE8075791.13.10e-2147.37hypothetical protein FH972_014479 [Carpinus fangiana][more]
Match NameE-valueIdentityDescription
A0A5D3C5901.05e-2558.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K3N02.17e-2555.88Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1[more]
A0A067KB751.30e-2156.00Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_13835 PE=4 SV=1[more]
A0A5N6RDG01.50e-2147.37Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014479 PE=4 SV=1[more]
A5BAN62.61e-2153.13Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_044272 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G09280.12.6e-0850.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34558:SF4EXPRESSED PROTEINcoord: 29..85
NoneNo IPR availablePANTHERPTHR34558EXPRESSED PROTEINcoord: 29..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g_new0030.1MC04g_new0030.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane