MC04g1930 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1930
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribosome-recycling factor, chloroplastic
Location	MC04: 26201036 .. 26203421 (+)
RNA-Seq Expression	MC04g1930
Synteny	MC04g1930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACTCTCAACTTCTTAATTTTAGATATATATCAATTAACTTTATTTCGTTGGTGTGAGATTTAAATATAATAAGAGATAAAATTATATTATAAATTTTTTAAATACAACAATGAAATTGAATATAAACTTAAAAACATAAAAAAGACATTTTTTATATCTCATTGGGGTCGAAAAGAAAAAACATTTATTATTTCATGCCCTCAAATAATAGTTTTGATGGTTCTGGAAGGGCTCAAATCTTCACCGTTGGGTTTAACGGAAAACCCTAATTAGTATTCTCAGGAAGCACAGAAATTAACAAACAAGTCCGGGATTTTTGAGGAAGTGGAATCAGTTGGAGCATGAAAGTCTAGTTCCATGGCTATGTTTCTGAAACGTTCACTCTCCTACAGAAATTTCCTTCTTTTTCGAAATTCTGCAGTTCCTAGTCGCAAGTTTTCCTTCTTCGTCAACGATCCCAGCATCGCATGGACCTCCGAAACGCCTGGGGTTTTTGCTCTTCCTCCTGCAGATTTCATCCGAGAAAGTCGCAGGGGCTTTGCTAAAGCCCGAAAATCAAGTAATCGTCTTTATATCTCTTACCATGCTTTTTTCTGATTTCGGAAACTCGTCGCATTGACTCTTCCCATGGTTAGAAATCAACATCAATTTTTTATATTGTTCATGGCCCTCCTGCTTCTTGTAAGCTCTGGTTTTGAATCGCTTTAATTTTCTCATTGGGAAGATGATTCTTCTACAAGCATGGCTGAGGCACTGCCTGATATTAGACCCACTATTAAAGCCAACGCTAGCTCACAGATGGAAGCTGCAATAGCTGCATTATCAGGAGAACTAAGCAAACTTCGAACAGGAAGAGCATCATCAGGTAACACTTCGAGGTTTCATTGTCTTGGCCTTGCATTATGATTGCTTACACTATCTTATACACTGTATTTACAGGAATGCTTGACCACATTATAGTAGAAACTTCAGGCTTGAAGATGCCGTTGAATCAGATTGCTGTTGTATCGGTCTTAGATTCAAAAACACTGTCGATAAATCCGTATGATCCTAATGTAATCAACTTACAAACCCCTGTTGTTATGTTATTACTTCTGCTTTCTACTTCGTGAGATGTGGTTAAATTTTCAGGTTTGTGCTTATTCCTGTTAAAGAGACTATATTGTGAAGTGAAATGAACAGAAAAGATGTTGCATCTAATTTACATCTTCCATTGTTCTTGAAATAGATTCTTTTGAATTTTGTTTTATTAGATTATTGACACGAGAATTGGATACACTTCTGGCACATCTGTTAGACTTCTTGATGTCTACTCGTAAAGGCTATTCTGTTCTGAGACACCGAACTTACGATATTTACTCCTCTATGCAGACACTGAAGAATTTAGAGAGTGCTATAGTTTCATCTCCTTTAGGCTTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCACCGTAAGCCTACATTTTGCTCTTCCAATGTCTATATTCTGTTTGGGCTGGTAAAGCCTTTAGGATGAGATTAGAAAGATTGCTTAAGTTAATATGGCTGTTTACTGTTTAGAAGTTGTTTCTCTAAGAATTATCAGGGCAAAATAGTTGTCTCAGCTGTTTATTTAACATGAAAGTTAGATTAACATTCAACACCTTGACCAATATTATTTCCTGATTTTTCTTTTTTATGCTCGCTATACCAGATTGACCAAAGAGCATATCCTGGTAATCTCCAATTCTTTTTTCCATCTCTCCATCTTGTTACTTTGCCTTCTTTCTGTAATTCATACTGGTCGACATTTCTTCTAGGCTGTATGTAAGCTGGTCACTAAGTGTTGTGAAGATTCCAGGCAAAGCATACGAAGAGCTCGTCAAAAGGTATTTTTAGCAATGTCTTCACCTGCTACATTTATTTTTCAAAAATCACTTTACATGATCATAGAGAGCGTAAAAGATTTCAAACAGTTCTCTATTGATTCATGATGTACCTCGTGTGGTAAGTTCGTGTGGCCTTGTGTGTGTGTGCATGACAAAGTTGAATTAGTCTGCAAATAGTCCCAGGTTTTGCAAATGCATCATAAAAGCACTCTATTCGATTATTATTTTACAGAATTATGAGTATATTGGTGGTCGATTTGCAGGCAATGGATACAATTAAAAAAATGAACGCTAGCTACCCAAAGGATGATATTAAAAGACTGGAAAAAGAAGTGAGTTGGAGACTACGTACCTAATCAAATCACAGTTCCAAGTTTGGAACTTGCTTTTTATATTTGTTGAATCTTGTTGCGTTTCTGCTTCCAGGTAGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGACCTCTGCAAGGCAAAGGAGAAGGAGATCGCTGGAGGC

mRNA sequence

GAACTCTCAACTTCTTAATTTTAGATATATATCAATTAACTTTATTTCGTTGGTGTGAGATTTAAATATAATAAGAGATAAAATTATATTATAAATTTTTTAAATACAACAATGAAATTGAATATAAACTTAAAAACATAAAAAAGACATTTTTTATATCTCATTGGGGTCGAAAAGAAAAAACATTTATTATTTCATGCCCTCAAATAATAGTTTTGATGGTTCTGGAAGGGCTCAAATCTTCACCGTTGGGTTTAACGGAAAACCCTAATTAGTATTCTCAGGAAGCACAGAAATTAACAAACAAGTCCGGGATTTTTGAGGAAGTGGAATCAGTTGGAGCATGAAAGTCTAGTTCCATGGCTATGTTTCTGAAACGTTCACTCTCCTACAGAAATTTCCTTCTTTTTCGAAATTCTGCAGTTCCTAGTCGCAAGTTTTCCTTCTTCGTCAACGATCCCAGCATCGCATGGACCTCCGAAACGCCTGGGGTTTTTGCTCTTCCTCCTGCAGATTTCATCCGAGAAAGTCGCAGGGGCTTTGCTAAAGCCCGAAAATCAAATGATTCTTCTACAAGCATGGCTGAGGCACTGCCTGATATTAGACCCACTATTAAAGCCAACGCTAGCTCACAGATGGAAGCTGCAATAGCTGCATTATCAGGAGAACTAAGCAAACTTCGAACAGGAAGAGCATCATCAGGAATGCTTGACCACATTATAGTAGAAACTTCAGGCTTGAAGATGCCGTTGAATCAGATTGCTGTTGTATCGGTCTTAGATTCAAAAACACTGTCGATAAATCCGTATGATCCTAATACACTGAAGAATTTAGAGAGTGCTATAGTTTCATCTCCTTTAGGCTTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAGCATATCCTGGCTGTATGTAAGCTGGTCACTAAGTGTTGTGAAGATTCCAGGCAAAGCATACGAAGAGCTCGTCAAAAGGCAATGGATACAATTAAAAAAATGAACGCTAGCTACCCAAAGGATGATATTAAAAGACTGGAAAAAGAAGTAGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGACCTCTGCAAGGCAAAGGAGAAGGAGATCGCTGGAGGC

Coding sequence (CDS)

ATGGCTATGTTTCTGAAACGTTCACTCTCCTACAGAAATTTCCTTCTTTTTCGAAATTCTGCAGTTCCTAGTCGCAAGTTTTCCTTCTTCGTCAACGATCCCAGCATCGCATGGACCTCCGAAACGCCTGGGGTTTTTGCTCTTCCTCCTGCAGATTTCATCCGAGAAAGTCGCAGGGGCTTTGCTAAAGCCCGAAAATCAAATGATTCTTCTACAAGCATGGCTGAGGCACTGCCTGATATTAGACCCACTATTAAAGCCAACGCTAGCTCACAGATGGAAGCTGCAATAGCTGCATTATCAGGAGAACTAAGCAAACTTCGAACAGGAAGAGCATCATCAGGAATGCTTGACCACATTATAGTAGAAACTTCAGGCTTGAAGATGCCGTTGAATCAGATTGCTGTTGTATCGGTCTTAGATTCAAAAACACTGTCGATAAATCCGTATGATCCTAATACACTGAAGAATTTAGAGAGTGCTATAGTTTCATCTCCTTTAGGCTTAGCACCAAGAGTAGATGGAGAGAGGTTAATTGCAGTCATTCCACCATTGACCAAAGAGCATATCCTGGCTGTATGTAAGCTGGTCACTAAGTGTTGTGAAGATTCCAGGCAAAGCATACGAAGAGCTCGTCAAAAGGCAATGGATACAATTAAAAAAATGAACGCTAGCTACCCAAAGGATGATATTAAAAGACTGGAAAAAGAAGTAGATGAATTGACTAAGAAGTTTATCAAGTCAGCCGAAGACCTCTGCAAGGCAAAGGAGAAGGAGATCGCTGGAGGC

Protein sequence

MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRGFAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDELTKKFIKSAEDLCKAKEKEIAGG

Homology

[Close]

BLAST of MC04g1930 vs. ExPASy Swiss-Prot
Match: Q9KA66 (Ribosome-recycling factor OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=frr PE=3 SV=3)

HSP 1 Score: 123.6 bits (309), Expect = 3.2e-27
Identity = 72/175 (41.14%), Postives = 110/175 (62.86%), Query Frame = 0


Query: 88  NASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSI 147
           +A  +M  A  AL  EL+KLR GRA+  MLD I VE  G + PLNQ+A +SV +++ L I
Sbjct: 8   DAEQRMTKATEALGRELAKLRAGRANPAMLDRITVEYYGAETPLNQLATISVPEARLLVI 67

Query: 148 NPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKCCEDSRQS 207
            P+D +++ ++E AI  S LGL P  DG  +   IPPLT+E    + KLV K  E+++ +
Sbjct: 68  QPFDKSSISDIERAIQKSDLGLTPSNDGTVIRITIPPLTEERRRDLTKLVKKSAEEAKVA 127

Query: 208 IRRARQKAMDTIKK--MNASYPKDDIKRLEKEVDELTKKFIKSAEDLCKAKEKEI 261
           +R  R+ A D +KK   +    +DD++R+ ++V +LT K+I+  +   +AKEKEI
Sbjct: 128 VRNIRRDANDDLKKRQKDGELTEDDLRRVTEDVQKLTDKYIEQIDQKAEAKEKEI 182

[Close]

BLAST of MC04g1930 vs. ExPASy Swiss-Prot
Match: Q5WFT1 (Ribosome-recycling factor OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=frr PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.2e-27
Identity = 69/178 (38.76%), Postives = 113/178 (63.48%), Query Frame = 0


Query: 85  IKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKT 144
           IKA+A ++M+ AI  LS EL+KLR GRA+  +LD + VE  G + PLNQ+A V+V +++ 
Sbjct: 5   IKADAKTRMDKAIDVLSRELAKLRAGRANPALLDRVTVEYYGAQTPLNQLASVTVPEARL 64

Query: 145 LSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKCCEDS 204
           L I PYD   + ++E AI+ S LGL P  DG+ +   IPPLT+E    + +LV+K  E+S
Sbjct: 65  LLITPYDKTAVASIEKAILKSDLGLTPSNDGQVIRIAIPPLTEERRKDLVRLVSKTAEES 124

Query: 205 RQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKFIKSAEDLCKAKEKEI 261
           + ++R  R+ A D +KK+  +    +D+++    ++ +LT  ++   ++  K KE+EI
Sbjct: 125 KVAVRNIRRDANDELKKLQKDGEMTEDELRSATDDIQKLTDTYVAKIDEKAKQKEQEI 182

[Close]

BLAST of MC04g1930 vs. ExPASy Swiss-Prot
Match: B8DSA1 (Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F) OX=883 GN=frr PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.4e-27
Identity = 70/179 (39.11%), Postives = 115/179 (64.25%), Query Frame = 0


Query: 84  TIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSK 143
           +I  +A  +ME A+ +L  E +KLRTGRAS+ ++D+I V+  G   P++Q+A VSV DS+
Sbjct: 5   SILLDAEERMEKALGSLDREFAKLRTGRASTSLVDNIKVDYYGTPTPISQLASVSVPDSR 64

Query: 144 TLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKCCED 203
           TL+I P+D +  + +E AI+ S LGL P  DG+ +   IPPLT+E    + K+  K  E+
Sbjct: 65  TLTIQPWDRSAFQLVEKAIMKSDLGLNPVNDGKIIRISIPPLTEERRKDLVKVARKYTEE 124

Query: 204 SRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKFIKSAEDLCKAKEKEI 261
           ++ ++R  R+ A D +KK+       +DD+++   +V +LT +F+  +++ C AKEKEI
Sbjct: 125 AKVAVRNVRRDANDALKKLEKGKEISEDDVRKSTDDVQKLTDRFVAKSDEKCTAKEKEI 183

[Close]

BLAST of MC04g1930 vs. ExPASy Swiss-Prot
Match: Q5L0J9 (Ribosome-recycling factor OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=frr PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-26
Identity = 67/174 (38.51%), Postives = 109/174 (62.64%), Query Frame = 0


Query: 89  ASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSKTLSIN 148
           A  +M+ A+ A + EL+ +R GRA++G+L+ + V+  G+  P+NQ+A +SV +++ L I 
Sbjct: 9   AKEKMDKAVQAFTRELASIRAGRANAGLLEKVTVDYYGVPTPINQLASISVPEARLLVIQ 68

Query: 149 PYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKCCEDSRQSI 208
           PYD + +K +E AI++S LGL P  DG  +  VIPPLT+E    + KLV K  ED++ ++
Sbjct: 69  PYDKSAIKEMEKAILASDLGLTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEDAKVAV 128

Query: 209 RRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKFIKSAEDLCKAKEKEI 261
           R  R+ A D +KK+  N    +D+++    EV +LT   I   + + K KEKE+
Sbjct: 129 RNIRRDANDELKKLEKNGEITEDELRSYTDEVQKLTDDHIAKIDAITKEKEKEV 182

[Close]

BLAST of MC04g1930 vs. ExPASy Swiss-Prot
Match: Q313G7 (Ribosome-recycling factor OS=Desulfovibrio alaskensis (strain ATCC BAA 1058 / DSM 17464 / G20) OX=207559 GN=frr PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.7e-26
Identity = 73/179 (40.78%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 84  TIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLDSK 143
           TI      +ME A+AAL  E  +LRTGRAS+ ++D I V+  G   P+NQ+A V+V DS+
Sbjct: 3   TILLETEERMEKAVAALDREFGRLRTGRASTSLVDSIKVDYYGTPTPINQLASVAVPDSR 62

Query: 144 TLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKCCED 203
           T++I P+D      +E AI+ S LGL P  DG+ +   +PPLT+E    + K+  K  ED
Sbjct: 63  TITIQPWDRGAFALVEKAIMQSDLGLTPINDGKIIRISMPPLTEERRKELVKVAKKYTED 122

Query: 204 SRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKFIKSAEDLCKAKEKEI 261
           ++ ++R  R+ A + IKKM  + +  +DD+KR + EV +LT  F+  +E +   KEKEI
Sbjct: 123 AKVAVRNIRRDANEQIKKMEKDKAITEDDMKRGQDEVQKLTDAFVAKSEKVLAKKEKEI 181

[Close]

BLAST of MC04g1930 vs. NCBI nr
Match: XP_022133492.1 (uncharacterized protein LOC111006057 [Momordica charantia])

HSP 1 Score: 495 bits (1274), Expect = 5.11e-176
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG
Sbjct: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA
Sbjct: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE
Sbjct: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAEDLCKAKEKEIAGG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEIAGG 263

[Close]

BLAST of MC04g1930 vs. NCBI nr
Match: KAG7033363.1 (frr [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 450 bits (1157), Expect = 3.46e-158
Identity = 238/263 (90.49%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRS SYRNFLL RN A PSR FSFFVND    WTSE PG FALPPADFIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPPADFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAEDLCKAKEKEI GG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of MC04g1930 vs. NCBI nr
Match: XP_023544000.1 (uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448 bits (1153), Expect = 1.41e-157
Identity = 237/263 (90.11%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRS SYRNFLL RN A PSR  SFFVND   +WTSE PG FALPPADFIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFLLLRNFANPSRNLSFFVNDLCNSWTSEMPGAFALPPADFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAEDLCKAKEKEI GG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of MC04g1930 vs. NCBI nr
Match: XP_022990977.1 (uncharacterized protein LOC111487708 [Cucurbita maxima])

HSP 1 Score: 448 bits (1153), Expect = 1.41e-157
Identity = 238/263 (90.49%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRS  YR+FLL RN A PSR FSFFVND    WTSE PGVFALPPADFIRESRRG
Sbjct: 1   MAMFLKRSFFYRSFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGVFALPPADFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAEDLCKAKEKEI GG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of MC04g1930 vs. NCBI nr
Match: KAG6602677.1 (hypothetical protein SDJN03_07910, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 447 bits (1149), Expect = 5.73e-157
Identity = 237/263 (90.11%), Postives = 246/263 (93.54%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRS SYRNFLL RN A PSR FSFFVND    WTSE PG FALP ADFIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGAFALPSADFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAEDLCKAKEKEI GG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of MC04g1930 vs. ExPASy TrEMBL
Match: A0A6J1BWU9 (Ribosome-recycling factor, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006057 PE=3 SV=1)

HSP 1 Score: 495 bits (1274), Expect = 2.48e-176
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG
Sbjct: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA
Sbjct: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE
Sbjct: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAEDLCKAKEKEIAGG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEIAGG 263

[Close]

BLAST of MC04g1930 vs. ExPASy TrEMBL
Match: A0A6J1JKE4 (Ribosome-recycling factor, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487708 PE=3 SV=1)

HSP 1 Score: 448 bits (1153), Expect = 6.82e-158
Identity = 238/263 (90.49%), Postives = 247/263 (93.92%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRS  YR+FLL RN A PSR FSFFVND    WTSE PGVFALPPADFIRESRRG
Sbjct: 1   MAMFLKRSFFYRSFLLLRNFANPSRNFSFFVNDLCNPWTSEMPGVFALPPADFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAEDLCKAKEKEI GG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of MC04g1930 vs. ExPASy TrEMBL
Match: A0A6J1GLU1 (Ribosome-recycling factor, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455524 PE=3 SV=1)

HSP 1 Score: 447 bits (1149), Expect = 2.77e-157
Identity = 237/263 (90.11%), Postives = 246/263 (93.54%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRS SYRNFLL RN A PSR FSFFV D    WTSE PG FALPPADFIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFLLLRNFANPSRNFSFFVYDLCNPWTSEMPGAFALPPADFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAK RKSN+SSTSMAEALPDIRPTIKANASSQMEAAI+ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSMAEALPDIRPTIKANASSQMEAAISALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVE SG++MPLNQIA VSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA
Sbjct: 121 IVEISGVRMPLNQIAAVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KKM++SYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKMSSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAEDLCKAKEKEI GG
Sbjct: 241 LTKKFIKSAEDLCKAKEKEITGG 263

[Close]

BLAST of MC04g1930 vs. ExPASy TrEMBL
Match: A0A1S3B2S9 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485499 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 5.19e-146
Identity = 220/263 (83.65%), Postives = 243/263 (92.40%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRS SYRNF++ RN A  +  FSF +N  S +WTS+T   FALPP+DFIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFIILRNFANQTCNFSFSLNHFSNSWTSDTSAGFALPPSDFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAK RKSN+SSTS+AEAL DIRPTIK+NASSQMEA+I ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSIAEALTDIRPTIKSNASSQMEASIVALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVETSG+K+PLNQIA VSVLDSKTLSINPYDP+TLKNLESAI+SSPLG+APRVDGERLIA
Sbjct: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPSTLKNLESAIISSPLGVAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KK+++SYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKISSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAE+LCKAKEKEI GG
Sbjct: 241 LTKKFIKSAEELCKAKEKEITGG 263

[Close]

BLAST of MC04g1930 vs. ExPASy TrEMBL
Match: A0A5D3DLY3 (Ribosome-recycling factor, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00450 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 1.18e-145
Identity = 220/263 (83.65%), Postives = 243/263 (92.40%), Query Frame = 0


Query: 1   MAMFLKRSLSYRNFLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRESRRG 60
           MAMFLKRS SYRNF++ RN A  +  FSF +N  S +WTS+T   FALPP+DFIRESRRG
Sbjct: 1   MAMFLKRSFSYRNFIILRNFANQTCNFSFSLNHFSNSWTSDTSAGFALPPSDFIRESRRG 60

Query: 61  FAKARKSNDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHI 120
           FAK RKSN+SSTS+AEAL DIRPTIK+NASSQMEA+I ALSGELSKLRTGRASSGMLDHI
Sbjct: 61  FAKGRKSNESSTSIAEALTDIRPTIKSNASSQMEASIVALSGELSKLRTGRASSGMLDHI 120

Query: 121 IVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIA 180
           IVETSG+K+PLNQIA VSVLDSKTLSINPYDP+TLKNLESAI+SSPLG+APRVDGERLIA
Sbjct: 121 IVETSGVKLPLNQIAAVSVLDSKTLSINPYDPSTLKNLESAIISSPLGVAPRVDGERLIA 180

Query: 181 VIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEKEVDE 240
           VIPPLTKEHI A+CKLVTKCCEDSRQSIRRARQKAMDT+KK+++SYPKDD+KRLEKEVDE
Sbjct: 181 VIPPLTKEHIQAMCKLVTKCCEDSRQSIRRARQKAMDTVKKISSSYPKDDMKRLEKEVDE 240

Query: 241 LTKKFIKSAEDLCKAKEKEIAGG 263
           LTKKFIKSAE+LCKAKEKEI GG
Sbjct: 241 LTKKFIKSAEELCKAKEKEITGG 263

[Close]

BLAST of MC04g1930 vs. TAIR 10
Match: AT3G01800.1 (Ribosome recycling factor )

HSP 1 Score: 311.2 bits (796), Expect = 7.8e-85
Identity = 172/264 (65.15%), Postives = 211/264 (79.92%), Query Frame = 0


Query: 1   MAMFLKRSLSYRN---FLLFRNSAVPSRKFSFFVNDPSIAWTSETPGVFALPPADFIRES 60
           MAMF++R+LS RN   FL   +  V SR FS F++ P++         F L   DF+R+S
Sbjct: 2   MAMFVRRALSSRNAIGFLRRSSVVVQSRDFS-FISSPNLMMMGGRDLQFDLSMPDFLRDS 61

Query: 61  RRGFAKARKS-NDSSTSMAEALPDIRPTIKANASSQMEAAIAALSGELSKLRTGRASSGM 120
           RRGFAK +KS +DS T M +A PDI PT+KA ASSQMEAAI ALS +L+KLRTGRA+ GM
Sbjct: 62  RRGFAKGKKSKDDSGTGMVDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRTGRAAPGM 121

Query: 121 LDHIIVETSGLKMPLNQIAVVSVLDSKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGE 180
           LDHI+VET G+KMPLN +A+VSVLD KTLS+NPYDP+T+K LE AIV+SPLGL P++DG+
Sbjct: 122 LDHIVVETGGVKMPLNHLALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGLNPKLDGQ 181

Query: 181 RLIAVIPPLTKEHILAVCKLVTKCCEDSRQSIRRARQKAMDTIKKMNASYPKDDIKRLEK 240
           RL+A IP LTKEHI A+CK+VTK  E  +QSIRRARQKA+DTIKK  +S PKD++KRLEK
Sbjct: 182 RLVASIPALTKEHIQAMCKIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPKDEVKRLEK 241

Query: 241 EVDELTKKFIKSAEDLCKAKEKEI 261
           EVDELTKKF+KSAED+CK+KEKEI
Sbjct: 242 EVDELTKKFVKSAEDMCKSKEKEI 264

[Close]

BLAST of MC04g1930 vs. TAIR 10
Match: AT3G63190.1 (ribosome recycling factor, chloroplast precursor )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 62/181 (34.25%), Postives = 104/181 (57.46%), Query Frame = 0


Query: 82  RPTIKANASSQMEAAIAALSGELSKLRTGRASSGMLDHIIVETSGLKMPLNQIAVVSVLD 141
           +  I+ +  S+ME  I  L    + +RTGR+++ MLD I VE  G  + L  IA +S  D
Sbjct: 92  KSAIETDVKSKMEKTIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPD 151

Query: 142 SKTLSINPYDPNTLKNLESAIVSSPLGLAPRVDGERLIAVIPPLTKEHILAVCKLVTKCC 201
             +L + PYD ++LK +E AIV+S LG+ P  DG+ +   +PPLT +    + K+V K  
Sbjct: 152 GSSLLLQPYDKSSLKAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQS 211

Query: 202 EDSRQSIRRARQKAMDTIKKM--NASYPKDDIKRLEKEVDELTKKFIKSAEDLCKAKEKE 261
           E+ + ++R  R+ A+ +  K+       +D++K L  ++ +L   ++K  E+L K KEKE
Sbjct: 212 EEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKE 271

The following BLAST results are available for this feature:

BLAST of MC04g1930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9KA66	3.2e-27	41.14	Ribosome-recycling factor OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 1819...	[more]
Q5WFT1	7.2e-27	38.76	Ribosome-recycling factor OS=Bacillus clausii (strain KSM-K16) OX=66692 GN=frr P...	[more]
B8DSA1	9.4e-27	39.11	Ribosome-recycling factor OS=Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki...	[more]
Q5L0J9	2.1e-26	38.51	Ribosome-recycling factor OS=Geobacillus kaustophilus (strain HTA426) OX=235909 ...	[more]
Q313G7	2.7e-26	40.78	Ribosome-recycling factor OS=Desulfovibrio alaskensis (strain ATCC BAA 1058 / DS...	[more]

BLAST of MC04g1930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133492.1	5.11e-176	100.00	uncharacterized protein LOC111006057 [Momordica charantia]	[more]
KAG7033363.1	3.46e-158	90.49	frr [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023544000.1	1.41e-157	90.11	uncharacterized protein LOC111803704 [Cucurbita pepo subsp. pepo]	[more]
XP_022990977.1	1.41e-157	90.49	uncharacterized protein LOC111487708 [Cucurbita maxima]	[more]
KAG6602677.1	5.73e-157	90.11	hypothetical protein SDJN03_07910, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC04g1930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWU9	2.48e-176	100.00	Ribosome-recycling factor, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1JKE4	6.82e-158	90.49	Ribosome-recycling factor, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1GLU1	2.77e-157	90.11	Ribosome-recycling factor, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S3B2S9	5.19e-146	83.65	Ribosome-recycling factor, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485499...	[more]
A0A5D3DLY3	1.18e-145	83.65	Ribosome-recycling factor, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of MC04g1930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01800.1	7.8e-85	65.15	Ribosome recycling factor	[more]
AT3G63190.1	1.9e-22	34.25	ribosome recycling factor, chloroplast precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 231..251
None	No IPR available	GENE3D	3.30.1360.40		coord: 111..185 e-value: 3.4E-55 score: 188.2
None	No IPR available	PANTHER	PTHR20982:SF12	OSJNBA0076N16.8 PROTEIN	coord: 1..262
IPR036191	RRF superfamily	GENE3D	1.10.132.20		coord: 90..260 e-value: 3.4E-55 score: 188.2
IPR036191	RRF superfamily	SUPERFAMILY	55194	Ribosome recycling factor, RRF	coord: 85..260
IPR023584	Ribosome recycling factor domain	PFAM	PF01765	RRF	coord: 101..260 e-value: 2.1E-54 score: 183.9
IPR002661	Ribosome recycling factor	PANTHER	PTHR20982	RIBOSOME RECYCLING FACTOR	coord: 1..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1930.1	MC04g1930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0043023	ribosomal large subunit binding