MC04g1836 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1836
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transcription factor bHLH61 isoform 1
Location	MC04: 25581653 .. 25583680 (-)
RNA-Seq Expression	MC04g1836
Synteny	MC04g1836

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTTCTTGTCCACAATTGTCACAAGTAGTACTACTACTTTAAGTTACTATATACATTACTACATACGCATTAGGGTTAATTTGTTGGTTTGTGTGTGGAAGATTGAGATGTGGTTTTATTTGAATTGTACAAACTGTAAAGTGAGCATACACTTGTTATTGTTAATGGGGAATGATTCATTGAGGAAAAAAACAACTGAAAAAAAAAAGAAAAGAATGTTAAGTAGGAAAAGAAAAATGATAGAAGGGCAATTTAGTAAGTAGAGTAGTTGGCATGGTATTTTATATATATTTGGTTGTAAAGGAGAGCAGTCATGTGGGAAGCTAGCAAACAGAAGATCATATAGATTTGAGGGCTCATCATGGCCTTATAAAAACACCCTCAAAGTTTTTTCTTTTTTTGCAGAGATACTAAAGTGGAACAAAGAGAGAAAAAAGATAGAAGAAGAAGAAGAAGGCTCATAAAAGAGGAATAAGGAGGCTGTGAAAAAAAAAAAAAAAGGATTGAAAAAAGAAGGTTGAATCATCCATATCCATGGTTTCTAGAGAGCACAAGAAGGCAGTTCTGCATGAGAAGCTCCAATTACTTCGTTCAATTACCAACTCTCATGCTGTAAATTCCCTTTAAAATCTTGTTCCTTATTTTCTTCTTCTTTCTTCTCTCCATTCAATCGAGATTTACTTTTGCCATTTTGGATTTTGAGATAATTCAAAAAAAAAAAAGTTTGATTATAAGCTAGTATGACCAATGTATGTAGAAGAAAATAATTAGTTTGGTAATTTTTTGAAAAGAAAAAAATTAGGAAAATGGTTGATTTAATTTTGAGAGCCAATGATTTTCTAACACAAAAGATTTTGGTTTTGTGTGTGTGGCAGCTAAACAAGGCCTCGATAATAGTGGATGCATCAAAATATATCGAGGAGCTAAAACAGAAAGTAGAAAGATTGAATCAAGACGTTCAAAATTCAATCCACCCAAATCCACTTCCCATGGTATTCTAAATCAATCAACCTCTTTTTTTCTTTTTTTTCTCTAATTCTGATGATTAGGGTGTGGTAATTGATAAAAAAGTTTGGTGATTTAATTAATTAATTTGTGTTTGTATGTGTGTGTTTTATAGCAGGTTACAGTGGAAACCCTAGTGAAGGGATTTTCTATAAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTCCTTGTCTCCATATTAGAAGTGTTTGAAGAGCTGGGGCTTAATGTTCTTGAAGCTAGGGTTTCCTGTACTGATAGTTTCCAATTACAAGCTATTGGAGAAGTAAGATTTTCCAATCACCCTTTTTTCTATATATATATATATATTATCCTCGTCATCATGTATATATTCTCTCTCACAATCTTTATATATTATATTCTTTCATGCATAATTGGGTTTTCTTTTCTTTGTCTTTCTTTTTTACCGAGGTTTAGACTTGAGTAGAGCTGAATTAGTTAGGTCATTTATATCTCCGATTAAAAGATTTTATGCATTCAAATCTCCATCAAAGATGTAGCACTTTTAAAAGTCATATCAATCATTCATTTTTTTTGTCACAAGTTTATTGCCTAAAGTGAGAGAATTTTCCATCTAATCATATACTTCCATGTTGGTTTTATATATCATATTGTAGCATTTTGAACTTATAATTAAGATTTTCGTGAATGAGACTCAATGTAAAAATGTGGTTTGGGGAATTTTTTCTGCAGATTGACGAACAAGGAGAGGAAGCCATTGACGCTCAAGCTGTGAAAGAAGCAGTCGTTCAAGCTATAAAGAGCTGGAGCGAAAGCAGTGAACAAGATTAGAAGAAGGAAAGAAAAAAAAAATCCTTAATTTCTCCAACTTGTTCCATTCTCGGCATTTCTTTCTTCTTCTTCTTTTTTTTTGGGGGGGGGGGNGGGGGGGTCTTACCCCTGATCTTTGCTTGTAATGTTTAGTAAAAATTAATCAATGGAAAACCAATTGATTAATCTTCTCCAAAAATAAAGGAATCGAAAATTGAATATATAAACA

mRNA sequence

AAATTTCTTGTCCACAATTGTCACAAGTAGTACTACTACTTTAAGTTACTATATACATTACTACATACGCATTAGGGTTAATTTGTTGGTTTGTGTGTGGAAGATTGAGATGTGGTTTTATTTGAATTGTACAAACTGTAAAGTGAGCATACACTTGTTATTGTTAATGGGGAATGATTCATTGAGGAAAAAAACAACTGAAAAAAAAAAGAAAAGAATGTTAAGTAGGAAAAGAAAAATGATAGAAGGGCAATTTAGTAAGTAGAGTAGTTGGCATGGTATTTTATATATATTTGGTTGTAAAGGAGAGCAGTCATGTGGGAAGCTAGCAAACAGAAGATCATATAGATTTGAGGGCTCATCATGGCCTTATAAAAACACCCTCAAAGTTTTTTCTTTTTTTGCAGAGATACTAAAGTGGAACAAAGAGAGAAAAAAGATAGAAGAAGAAGAAGAAGGCTCATAAAAGAGGAATAAGGAGGCTGTGAAAAAAAAAAAAAAAGGATTGAAAAAAGAAGGTTGAATCATCCATATCCATGGTTTCTAGAGAGCACAAGAAGGCAGTTCTGCATGAGAAGCTCCAATTACTTCGTTCAATTACCAACTCTCATGCTCTAAACAAGGCCTCGATAATAGTGGATGCATCAAAATATATCGAGGAGCTAAAACAGAAAGTAGAAAGATTGAATCAAGACGTTCAAAATTCAATCCACCCAAATCCACTTCCCATGGTTACAGTGGAAACCCTAGTGAAGGGATTTTCTATAAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTCCTTGTCTCCATATTAGAAGTGTTTGAAGAGCTGGGGCTTAATGTTCTTGAAGCTAGGGTTTCCTGTACTGATAGTTTCCAATTACAAGCTATTGGAGAAATTGACGAACAAGGAGAGGAAGCCATTGACGCTCAAGCTGTGAAAGAAGCAGTCGTTCAAGCTATAAAGAGCTGGAGCGAAAGCAGTGAACAAGATTAGAAGAAGGAAAGAAAAAAAAAATCCTTAATTTCTCCAACTTGTTCCATTCTCGGCATTTCTTTCTTCTTCTTCTTTTTTTTTGGGGGGGGGGGNGGGGGGGTCTTACCCCTGATCTTTGCTTGTAATGTTTAGTAAAAATTAATCAATGGAAAACCAATTGATTAATCTTCTCCAAAAATAAAGGAATCGAAAATTGAATATATAAACA

Coding sequence (CDS)

ATGGTTTCTAGAGAGCACAAGAAGGCAGTTCTGCATGAGAAGCTCCAATTACTTCGTTCAATTACCAACTCTCATGCTCTAAACAAGGCCTCGATAATAGTGGATGCATCAAAATATATCGAGGAGCTAAAACAGAAAGTAGAAAGATTGAATCAAGACGTTCAAAATTCAATCCACCCAAATCCACTTCCCATGGTTACAGTGGAAACCCTAGTGAAGGGATTTTCTATAAATGTATTTTCAGAAAAGAGCTGCCAAGGCCTCCTTGTCTCCATATTAGAAGTGTTTGAAGAGCTGGGGCTTAATGTTCTTGAAGCTAGGGTTTCCTGTACTGATAGTTTCCAATTACAAGCTATTGGAGAAATTGACGAACAAGGAGAGGAAGCCATTGACGCTCAAGCTGTGAAAGAAGCAGTCGTTCAAGCTATAAAGAGCTGGAGCGAAAGCAGTGAACAAGATTAG

Protein sequence

MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDVQNSIHPNPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQAIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD

Homology

[Close]

BLAST of MC04g1836 vs. ExPASy Swiss-Prot
Match: Q9LXA9 (Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.1e-06
Identity = 43/155 (27.74%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSIT-NSHALNKASIIVDASKYIEELKQKVERLNQDVQN-SI 60
           +++   ++  L+++L LLRSI      +++ SI+ DA  Y++EL  K+ +L +D Q    
Sbjct: 153 LMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGS 212

Query: 61  HPNPLPMVTVETLVKGF--------SINVFSEKSC---QGLLVSILEVFEELGLNVLEAR 120
           + +   ++T E++V+           +N   +  C    GL+VS +   E LGL + +  
Sbjct: 213 NSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCV 272

Query: 121 VSCTDSFQLQA-IGEIDEQGEEAIDAQAVKEAVVQ 142
           +SC   F LQA   E+ EQ    + ++A K+A+++
Sbjct: 273 ISCFSDFSLQASCFEVGEQ-RYMVTSEATKQALIR 306

[Close]

BLAST of MC04g1836 vs. ExPASy Swiss-Prot
Match: Q9LSL1 (Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.5e-04
Identity = 43/161 (26.71%), Postives = 79/161 (49.07%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSIT-NSHALNKASIIVDASKYIEELKQKVERLNQDVQ---- 60
           +++   ++  L+++L +LRSI      +++ SI+ DA  Y++EL  K+ +L  + Q    
Sbjct: 180 LMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQELGN 239

Query: 61  -NSIHPNPL-----PMVTVETLVKG---FSINVFSEKS-----CQ---GLLVSILEVFEE 120
            N+ H + L      +   E LV+    F I+   E +     C    GLL+S +   E 
Sbjct: 240 SNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLET 299

Query: 121 LGLNVLEARVSCTDSFQLQAIGEIDEQGEEAIDAQAVKEAV 140
           LGL + +  +SC   F LQA      +  + I ++ +K+A+
Sbjct: 300 LGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQAL 340

[Close]

BLAST of MC04g1836 vs. NCBI nr
Match: XP_022134038.1 (uncharacterized protein LOC111006410, partial [Momordica charantia])

HSP 1 Score: 286 bits (731), Expect = 6.64e-97
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDVQNSIHP 60
           MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDVQNSIHP
Sbjct: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDVQNSIHP 60

Query: 61  NPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQAIG 120
           NPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQAIG
Sbjct: 61  NPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQAIG 120

Query: 121 EIDEQGEEAIDAQAVKEAVVQAIKSWSESSE 151
           EIDEQGEEAIDAQAVKEAVVQAIKSWSESSE
Sbjct: 121 EIDEQGEEAIDAQAVKEAVVQAIKSWSESSE 151

[Close]

BLAST of MC04g1836 vs. NCBI nr
Match: XP_038884499.1 (uncharacterized protein LOC120075304 isoform X4 [Benincasa hispida])

HSP 1 Score: 265 bits (676), Expect = 2.27e-88
Identity = 144/161 (89.44%), Postives = 149/161 (92.55%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD---VQNS 60
           MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD   VQNS
Sbjct: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQNS 60

Query: 61  IHPNPL-----PMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTD 120
           IHPNPL     PMVTVE LVKGFSINVFSEKSCQGLLVSILEVFEELGLNV+EARVSCTD
Sbjct: 61  IHPNPLSHQYSPMVTVERLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTD 120

Query: 121 SFQLQAIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD 153
           +FQLQAI EI+E+GEEAIDAQAVKEAVVQAIKSW +S EQD
Sbjct: 121 TFQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKSWGQSGEQD 161

[Close]

BLAST of MC04g1836 vs. NCBI nr
Match: XP_038884498.1 (uncharacterized protein LOC120075304 isoform X3 [Benincasa hispida])

HSP 1 Score: 260 bits (664), Expect = 1.58e-86
Identity = 144/162 (88.89%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHA-LNKASIIVDASKYIEELKQKVERLNQD---VQN 60
           MVSREHKKAVLHEKLQLLRSITNSHA LNKASIIVDASKYIEELKQKVERLNQD   VQN
Sbjct: 1   MVSREHKKAVLHEKLQLLRSITNSHAQLNKASIIVDASKYIEELKQKVERLNQDISTVQN 60

Query: 61  SIHPNPL-----PMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCT 120
           SIHPNPL     PMVTVE LVKGFSINVFSEKSCQGLLVSILEVFEELGLNV+EARVSCT
Sbjct: 61  SIHPNPLSHQYSPMVTVERLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCT 120

Query: 121 DSFQLQAIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD 153
           D+FQLQAI EI+E+GEEAIDAQAVKEAVVQAIKSW +S EQD
Sbjct: 121 DTFQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKSWGQSGEQD 162

[Close]

BLAST of MC04g1836 vs. NCBI nr
Match: XP_038884497.1 (uncharacterized protein LOC120075304 isoform X2 [Benincasa hispida])

HSP 1 Score: 260 bits (664), Expect = 1.58e-86
Identity = 144/162 (88.89%), Postives = 149/162 (91.98%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD---VQNS 60
           MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD   VQNS
Sbjct: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDISTVQNS 60

Query: 61  IHPNPL-----PM-VTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCT 120
           IHPNPL     PM VTVE LVKGFSINVFSEKSCQGLLVSILEVFEELGLNV+EARVSCT
Sbjct: 61  IHPNPLSHQYSPMQVTVERLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCT 120

Query: 121 DSFQLQAIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD 153
           D+FQLQAI EI+E+GEEAIDAQAVKEAVVQAIKSW +S EQD
Sbjct: 121 DTFQLQAIAEIEEEGEEAIDAQAVKEAVVQAIKSWGQSGEQD 162

[Close]

BLAST of MC04g1836 vs. NCBI nr
Match: XP_022964721.1 (uncharacterized protein LOC111464709 isoform X2 [Cucurbita moschata] >XP_022991074.1 uncharacterized protein LOC111487778 isoform X2 [Cucurbita maxima] >XP_023527358.1 uncharacterized protein LOC111790608 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6602596.1 Transcription factor basic helix-loop-helix 61, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255 bits (652), Expect = 8.42e-85
Identity = 138/156 (88.46%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD---VQNS 60
           MVSREHKKA LHEKLQLLRSITNSHALNK SIIVDASKYIEELKQKVERLNQD   VQNS
Sbjct: 1   MVSREHKKAALHEKLQLLRSITNSHALNKGSIIVDASKYIEELKQKVERLNQDIATVQNS 60

Query: 61  IHPNPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQ 120
           IHPN  PMVTVE LVKGFSINVFSEKSCQGLLVSILE FEELGLNVLEARVSCTD+FQLQ
Sbjct: 61  IHPNH-PMVTVEALVKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDTFQLQ 120

Query: 121 AIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD 153
           A  EI+EQGEEA+DAQAVKEAVV+AIKSWS++ EQD
Sbjct: 121 AFAEIEEQGEEAMDAQAVKEAVVEAIKSWSQNGEQD 155

[Close]

BLAST of MC04g1836 vs. ExPASy TrEMBL
Match: A0A6J1C0X4 (uncharacterized protein LOC111006410 OS=Momordica charantia OX=3673 GN=LOC111006410 PE=4 SV=1)

HSP 1 Score: 286 bits (731), Expect = 3.21e-97
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDVQNSIHP 60
           MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDVQNSIHP
Sbjct: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQDVQNSIHP 60

Query: 61  NPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQAIG 120
           NPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQAIG
Sbjct: 61  NPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQAIG 120

Query: 121 EIDEQGEEAIDAQAVKEAVVQAIKSWSESSE 151
           EIDEQGEEAIDAQAVKEAVVQAIKSWSESSE
Sbjct: 121 EIDEQGEEAIDAQAVKEAVVQAIKSWSESSE 151

[Close]

BLAST of MC04g1836 vs. ExPASy TrEMBL
Match: A0A6J1JTS8 (uncharacterized protein LOC111487778 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487778 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 4.08e-85
Identity = 138/156 (88.46%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD---VQNS 60
           MVSREHKKA LHEKLQLLRSITNSHALNK SIIVDASKYIEELKQKVERLNQD   VQNS
Sbjct: 1   MVSREHKKAALHEKLQLLRSITNSHALNKGSIIVDASKYIEELKQKVERLNQDIATVQNS 60

Query: 61  IHPNPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQ 120
           IHPN  PMVTVE LVKGFSINVFSEKSCQGLLVSILE FEELGLNVLEARVSCTD+FQLQ
Sbjct: 61  IHPNH-PMVTVEALVKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDTFQLQ 120

Query: 121 AIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD 153
           A  EI+EQGEEA+DAQAVKEAVV+AIKSWS++ EQD
Sbjct: 121 AFAEIEEQGEEAMDAQAVKEAVVEAIKSWSQNGEQD 155

[Close]

BLAST of MC04g1836 vs. ExPASy TrEMBL
Match: A0A6J1HJR0 (uncharacterized protein LOC111464709 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464709 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 4.08e-85
Identity = 138/156 (88.46%), Postives = 144/156 (92.31%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD---VQNS 60
           MVSREHKKA LHEKLQLLRSITNSHALNK SIIVDASKYIEELKQKVERLNQD   VQNS
Sbjct: 1   MVSREHKKAALHEKLQLLRSITNSHALNKGSIIVDASKYIEELKQKVERLNQDIATVQNS 60

Query: 61  IHPNPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQ 120
           IHPN  PMVTVE LVKGFSINVFSEKSCQGLLVSILE FEELGLNVLEARVSCTD+FQLQ
Sbjct: 61  IHPNH-PMVTVEALVKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDTFQLQ 120

Query: 121 AIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD 153
           A  EI+EQGEEA+DAQAVKEAVV+AIKSWS++ EQD
Sbjct: 121 AFAEIEEQGEEAMDAQAVKEAVVEAIKSWSQNGEQD 155

[Close]

BLAST of MC04g1836 vs. ExPASy TrEMBL
Match: A0A6J1JV46 (uncharacterized protein LOC111487778 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487778 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 2.44e-84
Identity = 136/156 (87.18%), Postives = 142/156 (91.03%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD---VQNS 60
           MVSREHKKA LHEKLQLLRSITNSHALNK SIIVDASKYIEELKQKVERLNQD   VQNS
Sbjct: 1   MVSREHKKAALHEKLQLLRSITNSHALNKGSIIVDASKYIEELKQKVERLNQDIATVQNS 60

Query: 61  IHPNPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQ 120
           IHPN    VTVE LVKGFSINVFSEKSCQGLLVSILE FEELGLNVLEARVSCTD+FQLQ
Sbjct: 61  IHPNHPMQVTVEALVKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDTFQLQ 120

Query: 121 AIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD 153
           A  EI+EQGEEA+DAQAVKEAVV+AIKSWS++ EQD
Sbjct: 121 AFAEIEEQGEEAMDAQAVKEAVVEAIKSWSQNGEQD 156

[Close]

BLAST of MC04g1836 vs. ExPASy TrEMBL
Match: A0A6J1HIH6 (uncharacterized protein LOC111464709 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464709 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 2.44e-84
Identity = 136/156 (87.18%), Postives = 142/156 (91.03%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD---VQNS 60
           MVSREHKKA LHEKLQLLRSITNSHALNK SIIVDASKYIEELKQKVERLNQD   VQNS
Sbjct: 1   MVSREHKKAALHEKLQLLRSITNSHALNKGSIIVDASKYIEELKQKVERLNQDIATVQNS 60

Query: 61  IHPNPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQLQ 120
           IHPN    VTVE LVKGFSINVFSEKSCQGLLVSILE FEELGLNVLEARVSCTD+FQLQ
Sbjct: 61  IHPNHPMQVTVEALVKGFSINVFSEKSCQGLLVSILEAFEELGLNVLEARVSCTDTFQLQ 120

Query: 121 AIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSEQD 153
           A  EI+EQGEEA+DAQAVKEAVV+AIKSWS++ EQD
Sbjct: 121 AFAEIEEQGEEAMDAQAVKEAVVEAIKSWSQNGEQD 156

[Close]

BLAST of MC04g1836 vs. TAIR 10
Match: AT2G40435.1 (BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1); Has 289 Blast hits to 289 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 289; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 172.6 bits (436), Expect = 2.5e-43
Identity = 100/156 (64.10%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLNQD---VQNS 60
           MVSRE K+  L EK QLLRSITNSHA N  SII+DASKYI++LKQKVER NQD    Q+S
Sbjct: 1   MVSREQKRGSLQEKFQLLRSITNSHAENDTSIIMDASKYIQKLKQKVERFNQDPTAEQSS 60

Query: 61  IHPN--PLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDSFQ 120
             P     PMVTVETL KGF INVFS K+  G+LVS+LE FE++GLNVLEAR SCTDSF 
Sbjct: 61  SEPTDPKTPMVTVETLDKGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFS 120

Query: 121 LQAIGEIDEQGEEAIDAQAVKEAVVQAIKSWSESSE 152
           L A+G  +E GE  +DA+AVK+AV  AI+SW E ++
Sbjct: 121 LHAMGLENEDGEN-MDAEAVKQAVTDAIRSWGEIND 155

[Close]

BLAST of MC04g1836 vs. TAIR 10
Match: AT3G56220.1 (transcription regulators )

HSP 1 Score: 160.2 bits (404), Expect = 1.3e-39
Identity = 92/156 (58.97%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 1   MVSREHKK-AVLHEKLQLLRSITNSHALNKASIIVDASKYIEELKQKVERLN------QD 60
           MVSREHK+ + L EK  LLRSIT+SHA ++ SIIVDASKYI++LKQKVE++N      Q 
Sbjct: 1   MVSREHKRGSSLREKFHLLRSITDSHAESETSIIVDASKYIKKLKQKVEKINNATTSEQS 60

Query: 61  VQNSIHPNPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCTDS 120
            + S  PN  PMVTVETL KGF I V S K+  G+LV +LE FE+LGL+V+EARVSCTD+
Sbjct: 61  FRESSDPN--PMVTVETLEKGFMIKVMSRKNEAGMLVCVLETFEDLGLDVVEARVSCTDT 120

Query: 121 FQLQAIGEIDEQGEEAIDAQAVKEAVVQAIKSWSES 150
           F L AIG  +    + IDA+AVK+AV +AI++WS+S
Sbjct: 121 FSLHAIGSSNNDDGDCIDAEAVKQAVAEAIRTWSDS 154

[Close]

BLAST of MC04g1836 vs. TAIR 10
Match: AT1G29270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40435.1); Has 98 Blast hits to 98 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 3.7e-10
Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSITN-SHALNKASIIV-DASKYIEELKQKVERLNQDVQN-- 60
           MV+ E KK     K   L+++T+   ++++ S+++ +A  YI  LK ++E L ++ ++  
Sbjct: 1   MVASEQKKRASQGKPHFLKNLTHFKFSIHEQSMVIREALLYIAMLKLEIEALQREYEDLK 60

Query: 61  -----SIHPNPLPMVTVETLVKGFSINVFSEKSCQGLLVSILEVFEELGLNVLEARVSCT 120
                S+H      V VE + + F + + S +  +  LV+ILE FEE+GLNV +AR SC 
Sbjct: 61  ITKKESLH--QFQEVKVEKIGEMFQVKIKSPRG-ENNLVNILEAFEEMGLNVAQARASCL 120

[Close]

BLAST of MC04g1836 vs. TAIR 10
Match: AT5G10570.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-07
Identity = 43/155 (27.74%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSIT-NSHALNKASIIVDASKYIEELKQKVERLNQDVQN-SI 60
           +++   ++  L+++L LLRSI      +++ SI+ DA  Y++EL  K+ +L +D Q    
Sbjct: 153 LMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDEQELGS 212

Query: 61  HPNPLPMVTVETLVKGF--------SINVFSEKSC---QGLLVSILEVFEELGLNVLEAR 120
           + +   ++T E++V+           +N   +  C    GL+VS +   E LGL + +  
Sbjct: 213 NSHLSTLITNESMVRNSLKFEVDQREVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCV 272

Query: 121 VSCTDSFQLQA-IGEIDEQGEEAIDAQAVKEAVVQ 142
           +SC   F LQA   E+ EQ    + ++A K+A+++
Sbjct: 273 ISCFSDFSLQASCFEVGEQ-RYMVTSEATKQALIR 306

[Close]

BLAST of MC04g1836 vs. TAIR 10
Match: AT5G65640.1 (beta HLH protein 93 )

HSP 1 Score: 45.1 bits (105), Expect = 6.1e-05
Identity = 43/161 (26.71%), Postives = 79/161 (49.07%), Query Frame = 0


Query: 1   MVSREHKKAVLHEKLQLLRSIT-NSHALNKASIIVDASKYIEELKQKVERLNQDVQ---- 60
           +++   ++  L+++L +LRSI      +++ SI+ DA  Y++EL  K+ +L  + Q    
Sbjct: 180 LMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQELGN 239

Query: 61  -NSIHPNPL-----PMVTVETLVKG---FSINVFSEKS-----CQ---GLLVSILEVFEE 120
            N+ H + L      +   E LV+    F I+   E +     C    GLL+S +   E 
Sbjct: 240 SNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLET 299

Query: 121 LGLNVLEARVSCTDSFQLQAIGEIDEQGEEAIDAQAVKEAV 140
           LGL + +  +SC   F LQA      +  + I ++ +K+A+
Sbjct: 300 LGLEIEQCVISCFSDFSLQASCSEGAEQRDFITSEDIKQAL 340

The following BLAST results are available for this feature:

BLAST of MC04g1836 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXA9	3.1e-06	27.74	Transcription factor bHLH61 OS=Arabidopsis thaliana OX=3702 GN=BHLH61 PE=2 SV=1	[more]
Q9LSL1	8.5e-04	26.71	Transcription factor bHLH93 OS=Arabidopsis thaliana OX=3702 GN=BHLH93 PE=1 SV=1	[more]

BLAST of MC04g1836 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134038.1	6.64e-97	100.00	uncharacterized protein LOC111006410, partial [Momordica charantia]	[more]
XP_038884499.1	2.27e-88	89.44	uncharacterized protein LOC120075304 isoform X4 [Benincasa hispida]	[more]
XP_038884498.1	1.58e-86	88.89	uncharacterized protein LOC120075304 isoform X3 [Benincasa hispida]	[more]
XP_038884497.1	1.58e-86	88.89	uncharacterized protein LOC120075304 isoform X2 [Benincasa hispida]	[more]
XP_022964721.1	8.42e-85	88.46	uncharacterized protein LOC111464709 isoform X2 [Cucurbita moschata] >XP_0229910...	[more]

BLAST of MC04g1836 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C0X4	3.21e-97	100.00	uncharacterized protein LOC111006410 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JTS8	4.08e-85	88.46	uncharacterized protein LOC111487778 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HJR0	4.08e-85	88.46	uncharacterized protein LOC111464709 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JV46	2.44e-84	87.18	uncharacterized protein LOC111487778 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HIH6	2.44e-84	87.18	uncharacterized protein LOC111464709 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MC04g1836 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40435.1	2.5e-43	64.10	BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G5...	[more]
AT3G56220.1	1.3e-39	58.97	transcription regulators	[more]
AT1G29270.1	3.7e-10	34.38	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G10570.1	2.2e-07	27.74	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G65640.1	6.1e-05	26.71	beta HLH protein 93	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..53
None	No IPR available	PANTHER	PTHR31945:SF5	TRANSCRIPTION FACTOR SCREAM-LIKE PROTEIN	coord: 1..152
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 1..152
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 11..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1836.1	MC04g1836.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity