MC04g1571 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g1571
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 23406814 .. 23407086 (+)
RNA-Seq ExpressionMC04g1571
SyntenyMC04g1571
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCTTGCAGTGGTAGACGAAGCCATTGATGTCCATTCTGCAAGCCTCGCACTGCAGTTTGCAATGGTCATGGCAGGCTTTTGGTGGGGTTCTTAGGAACTTGAAGGTTGAACCCGGGAAGAATTCATGGCGAAATGGCGAGGTTTGAGGAAACATGCACTCTCGGTGAAGATCGAAATCACATTTTTCGCATCGGTATCGAGGCCCGAATCCCCTTTCTTTACAGCCATCGCAGGTGTAAGGTTTCAGGTAGTTCTTCAACTCCAGTTTATG

mRNA sequence

TTCCTTGCAGTGGTAGACGAAGCCATTGATGTCCATTCTGCAAGCCTCGCACTGCAGTTTGCAATGGTCATGGCAGGCTTTTGGTGGGGTTCTAACTTGAAGGTTACCCGGGAAGAATTCATGGCGAAATGGCGAGGTTTGAGGAAACATGCACTCTCGGTGAAGATCGAAATCACATTTTTCGCATCGGTATCGAGGCCCGAATCCCCTTTCTTTACAGCCATCGCAGGTGTAAGGTTTCAGGTAGTTCTTCAACTCCAGTTTATG

Coding sequence (CDS)

TTCCTTGCAGTGGTAGACGAAGCCATTGATGTCCATTCTGCAAGCCTCGCACTGCAGTTTGCAATGGTCATGGCAGGCTTTTGGTGGGGTTCTAACTTGAAGGTTACCCGGGAAGAATTCATGGCGAAATGGCGAGGTTTGAGGAAACATGCACTCTCGGTGAAGATCGAAATCACATTTTTCGCATCGGTATCGAGGCCCGAATCCCCTTTCTTTACAGCCATCGCAGGTGTAAGGTTTCAGGTAGTTCTTCAACTCCAGTTTATG

Protein sequence

FLAVVDEAIDVHSASLALQFAMVMAGFWWGSNLKVTREEFMAKWRGLRKHALSVKIEITFFASVSRPESPFFTAIAGVRFQVVLQLQFM
Homology
[Close]
BLAST of MC04g1571 vs. NCBI nr
Match: XP_023550075.1 (uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 70.9 bits (172), Expect = 1.57e-12
Identity = 49/91 (53.85%), Postives = 60/91 (65.93%), Query Frame = 0 

Query: 1   FLAVVDEAIDVHSASLALQFAMVMAGFWWGSN-LKV-TREEFMAKWRGLRKHALSVKIEI 60
           FLAV  EAID  SAS+A  + +V A FWW S  LK   R+EFM     + KH   V+I+I
Sbjct: 63  FLAVEHEAIDGFSASVAPYYGLV-AAFWWVSEELKGGARKEFMGIRCIVCKHTGFVEIKI 122

Query: 61  TFFASVSRPESPFFTAIAGVRFQVVLQLQFM 89
            F ASVSR E+ F  AIAG+RF ++LQLQFM
Sbjct: 123 AFIASVSRAEACFLAAIAGIRFLILLQLQFM 152

[Close]
BLAST of MC04g1571 vs. NCBI nr
Match: XP_023550074.1 (uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 70.9 bits (172), Expect = 2.08e-12
Identity = 49/91 (53.85%), Postives = 60/91 (65.93%), Query Frame = 0 

Query: 1   FLAVVDEAIDVHSASLALQFAMVMAGFWWGSN-LKV-TREEFMAKWRGLRKHALSVKIEI 60
           FLAV  EAID  SAS+A  + +V A FWW S  LK   R+EFM     + KH   V+I+I
Sbjct: 63  FLAVEHEAIDGFSASVAPYYGLV-AAFWWVSEELKGGARKEFMGIRCIVCKHTGFVEIKI 122

Query: 61  TFFASVSRPESPFFTAIAGVRFQVVLQLQFM 89
            F ASVSR E+ F  AIAG+RF ++LQLQFM
Sbjct: 123 AFIASVSRAEACFLAAIAGIRFLILLQLQFM 152

The following BLAST results are available for this feature:
BLAST of MC04g1571 vs.
Match NameE-valueIdentityDescription
BLAST of MC04g1571 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023550075.11.57e-1253.85uncharacterized protein LOC111808373 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023550074.12.08e-1253.85uncharacterized protein LOC111808373 isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of MC04g1571 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MC04g1571 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g1571.1MC04g1571.1mRNA