MC04g1332 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1332
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RNA-binding protein 2-like
Location	MC04: 21309664 .. 21313387 (+)
RNA-Seq Expression	MC04g1332
Synteny	MC04g1332

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGTGGAATTAGATAATTGATTGTTGGCTAATATCTACGGTGAGGTGTCGCGTACTGGATCCTAGTGTGTCTGAGGAGCTTCTTCCAGCGCCAAACATTTACTCGGGCTCGGAAACAAGAGAAGCTCCAAATTAATGGCCACTTCTTTTTAGGGTTTTAGAATTCTGTAAGTGCTGGTCAAGTTCGATAAATTTGTCTCGGGTTTCCCAAGATCGCGCTTTCCCTCTGTCTTCTGTCTCACTCTGAAGCTCTAATTTTGGAGAATTGCTGGAGATATGGCGGATGACTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCCCGTAATGATTACGGTACGCCTTTGTGTTTATTGTCTTTACTTTCCTGCTACCCATAAATTCTTTCTATAATTTAGTTTGTTTTCTAAGTTCCCTTTTGAATTCAACACGTTTTTCTTTTTTTTTTCTTTTTTTTTTAAGAAACAATTTCGTTGGTGGTATGAAATTATAGAAAAGGGGTAATTCCATTCACGGGAGCTACAAAAAACTTCTTCAATTGGGTAAAAGAGAAGAAAGAAAAGCTATAGCGGTGTAAGAGAGGAGAGCATTTACACCACAGTAAGACTATAGCATCAAAAGATTGATCAGAAGTACCCTACTTGTCTATTAAGATTCTGCGGTTCCTTTCTTGCTAAGTGACTCAAAGCATATAGTCAATAACATATAGTCTTATCGGTCATTTATGCTCCTTGTATATGAGCTCAATAGCAGTTTTATTGCATATAGTGATTTTTCTGGTATAAAATTCGATGAAAATTGTAAGCGAAGAAAAATTTTCTTGAAATATCTTGAGAACTAATGAGAACATTCTCTTATTGTTTGTACTGGTTTGTTAAATTAGCTGTGAATAATCAGTGTTCACGAGGTAATTGAATTAAGGTTTATTCCGATAAAGTTGTAGTTGTAATTGAATTATCACCAGCAATCAATTACGTTTAGTAAATCAGACTAGAAGAAAATGAGGGCCAAGCAGTTGACTATGAAGATCCTTAGTTGGGATGTGAAGCGTTGGGGGTTGGGGGAATAGTGTAATGCTATAAATGATAAGAGAGGTCCATCCAAATGTGGGGTTAATACAAGAATCTAAAATTAAATTGCTAGGGTTCTTATCCAAAAAAAAATCTAAATTTCTAGGGTGGATATAAATATAGTAAAAGCCATGTGGAGGTTGAGGGGGATTGGGTTGGCTTCAAAGTTGAGTCTGGGAGTGATTTTGGGTGGCAGATTGCTTTATAGGTTAAAGTAAGTTGAATGTAGTATGTAGGAGTGCCCAAGGAAAAAATTATCCATCCATTGAAATTCATTTGGGTGGGTGATGGATGGAAATCTGGTATCTAAGTATTTATGGGTCAAGTAACTAATATGGAGAGGAAGGAATTCTGGAATAAAGTGAGGAAGATGGATAGTGGTGTACGGGGGGAGACTTCAATGCAGTGAGAATAGTACAGAAATCTTCAGCCGGATCAGGAAATTAAAGAAGCATGATGAACTTGAATAAGTTAGTTGATGAGATAAGAATGATCGAAACTCCCTTAATTAATGGAAGATATACCTGGTTTAGCTTTAGAGATGTTCTTGAGTAGTCCCTAGTGAATAGGTTTTGTGTGTCCCAGGAATCGTTAATAAAATTTCAAGAGTTGAAGACAATAAAGAAGGCTAGTACAACTCTTGATCCCCATTTAAATGTGTTGTTAACAGGGGAGCTTAACGGGACCATGCCTATTTAGACTGTAGAACCATTGGGTGAAATATCAAGAATTTTATAGGACAGTAGAGAGCAGACATGGAAGTAAAAAATAATGTGGACATTCGGGTTTTAAATGATACTAGAATCTGGACAACTTGAGTGGGATATAATCGAATGGGGATTAGGAACATTAGGAAACTTTAGATAGAGGAGGAAGGAAATTCAAAACCTAATCAGCAACATAAATAAAAAAGGGAGGATGGGTGCTTGGAACAGAGAGCTAAAGAGAGAAGAAAGCAATGAAATGGCAATTACATGAGATCATCCTTAAAAAAGAGAAGAGATACTTCCCAAAATTTAATGGTTAAAAGAATTTGATGAAAGACTTTTGGTATATATTTAATAAATAATCATGTTTTAGTGGAAGACTTAGCCGTTTTTATAAGAAATTAGAAAATCTAGTTTTGATATCATGTTATTGTAGCCGTATTGGTATATAATTCATGAGGCTTGTGAATTGTGATCCCCTACTATAATTATGTTTAGATACTTCATGCAATTTATTTGGCATGATCTACATTTCATACGTATAGTTGTTAACAACCTGCTATAATTTAAAACTTTTCTGAAAGAAAATTTCACTTGATTTTCTAGAGTATAAGCTGAGGGTTTTTTGGGGACTGGAAGAAATTTTCACTTGATTTACAATTGGTCTTTTTAAAGCCTTGATTTTTTTATTTTTAAAATTTTCTTTTACAGAGGTCCCCGTCCATTGAACTTAAAGTAATGTTGTATAGAATTTTCATTGGGCCAGGGTCAAGAGAATATATATGTGGAATATGAAAGCATAACTGAACTGCTAAAACGATCAATTTGAATAGTAAGATAGGAATTTCTAGACTCATTGAACTCGAGTGATTTAATTGAATTGAAGTAGTGTTGCGGACCCATTTTCTTTGACATATTTTCTATTCCTTTGCTAAAGGGACATCCGTTGTTTCATGTCTGGAATAAGCTCATTTTGTTTGTCTTGATAACAGTTTCCCTTTATTGTAAATTGCAAATGGATTTAGGCCCTTCTTTCACTCTCTGCAGAACTTCCATCCTCTGGATTGCCTACAGGCCATGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAAAGATACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGGTATGACTGAAATCTTCATTTATTTTCTCTTCTTGCCTTGCTGTTCGAGTGCTGAAAACTTGTCCTAATTGCTTCTGAAGCAACTTTCTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGATCCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACGTGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTTCAGACAGTTCCAGGAGAGAAGTAGCTCGTATCCTTTATCTTAGTGGCGACCCCGATGCAAAATTATTTTTTCTTCCTTTTCAATTATTTAGTTAAGAACTTCATTCCTTTACTTCAATTTAGATATTTTCCGCCCGTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATGTAATTGGCTTTTTCCTTGTAATTATTTTCTTGTTTTTTGATTTCTTTGTTAACTCCTTAATATGTGCTAACCTTTACTGTGTTTTTTATGTCACATTTGTTCCAAAATAAAGCGTGGTGGGGACCCTCTTATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCCTTGCAAGGT

mRNA sequence

GACGTGGAATTAGATAATTGATTGTTGGCTAATATCTACGGTGAGGTGTCGCGTACTGGATCCTAGTGTGTCTGAGGAGCTTCTTCCAGCGCCAAACATTTACTCGGGCTCGGAAACAAGAGAAGCTCCAAATTAATGGCCACTTCTTTTTAGGGTTTTAGAATTCTGTAAGTGCTGGTCAAGTTCGATAAATTTGTCTCGGGTTTCCCAAGATCGCGCTTTCCCTCTGTCTTCTGTCTCACTCTGAAGCTCTAATTTTGGAGAATTGCTGGAGATATGGCGGATGACTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCCCGTAATGATTACGAACTTCCATCCTCTGGATTGCCTACAGGCCATGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAAAGATACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGATCCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACGTGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTTCAGACAGTTCCAGGAGAGAAGTAGCTCATATTTTCCGCCCGTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCTCTTATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCCTTGCAAGGT

Coding sequence (CDS)

ATGGCGGATGACTATTGGAATCGGCAGCAGCCTCTGCTTCCCTCGCCAGGCATGCTTAAACGACCCCGTAATGATTACGAACTTCCATCCTCTGGATTGCCTACAGGCCATGAGATGCACAATTATTTAGTAAGTGATGATCGTGGTGGTCCTCGGGCTGTTAAAGATACACAAACGATTGGATCAGCATATGATCGTTATCTCCAAAGTGTGCAACTTTCTTCTTTTAATTCTGGAGAAGTACCTACCCATGGGGATATGGGAATGGCAAGGCCTGTTGCAAACAGAATGCCAGTTGGGAGTAGAATGCCTGGGCCTTCAATACCCGATCCTGTTGTAATGAGTCGTCCTCCTGCAGTTTCTCCCGATCTGGCACCAAATGGTCGAAATATTGAGTATGGTAATCATCTCCCCATGGATTCAATGACCAGACCAGGACGTGAAACTGTACCTCTTCCACCTGATGCCTCCAACACTTTATATGTTGAAGGACTTCCTTCAGACAGTTCCAGGAGAGAAGTAGCTCATATTTTCCGCCCGTTTGTGGGATATAAAGAATTGAGACTTGTGAGCAAAGAATCTAAACATCGTGGTGGGGACCCTCTTATATTATGTTTTGTGGATTTTGCAAACCCAGCCTGTGCAGCAACTGCCATGAGTGCCTTGCAAGGT

Protein sequence

MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG

Homology

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BLAST of MC04g1332 vs. ExPASy Swiss-Prot
Match: G7ID19 (RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.7e-73
Identity = 138/227 (60.79%), Postives = 173/227 (76.21%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSP-GMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQT 60
           MAD +WNRQQ  LP P GMLKRPR +Y+   SG+ +G+E+HNY+  ++  G + + DT+ 
Sbjct: 1   MADGFWNRQQQHLPPPGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNN--GHQMLNDTKI 60

Query: 61  IGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA 120
           +GSAYDR+LQS  L+SFNSGE    G +G AR V         +PG S+ DP  M     
Sbjct: 61  LGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-------GELPGHSLGDPSAMGHLSG 120

Query: 121 V--SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHI 180
           V   PDL+ NGR++ +G  LP+D+++RPG ET+PLP DAS+TLYVEGLPSDS++REVAHI
Sbjct: 121 VGGGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHI 180

Query: 181 FRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 225
           FRPFVGY+E+RLV+KESKHRGGDPLILCFVDFANPACAATA+SALQG
Sbjct: 181 FRPFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQG 218

[Close]

BLAST of MC04g1332 vs. ExPASy Swiss-Prot
Match: Q8H0P8 (RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-71
Identity = 142/225 (63.11%), Postives = 165/225 (73.33%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MAD YWNRQQ LLP  G+ KRPR DYE+P+SGLP+G+EMH     +DR G   VKD++TI
Sbjct: 1   MADGYWNRQQSLLPHSGLHKRPRPDYEMPASGLPSGNEMHYLSREEDRSGHPMVKDSKTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVM-SRPPA 120
           GSAYDRYLQ  Q+ SF SGE  T G +G+ R +         +P  S+ DP  M  R   
Sbjct: 61  GSAYDRYLQG-QVPSFTSGEASTVGALGLQRGIGG-------LPNHSLSDPSAMIGRHGG 120

Query: 121 VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFR 180
             PDLAPNGR + YG   PMD ++R G E   LPPDAS TLY+EGLPSD +RREVAHIFR
Sbjct: 121 GGPDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFR 180

Query: 181 PFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 225
           PFVGY+E+RLVSKE+KHR GDPLILCFVDFANPACAATA+SALQG
Sbjct: 181 PFVGYREVRLVSKEAKHR-GDPLILCFVDFANPACAATALSALQG 216

[Close]

BLAST of MC04g1332 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-51
Identity = 109/192 (56.77%), Postives = 139/192 (72.40%), Query Frame = 0


Query: 33  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMAR 92
           +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R
Sbjct: 207 IPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVR 266

Query: 93  PVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVP 152
              + M     MPGPS+ + ++     ++  D  PNGR++ +G    +DS+ RPGRE  P
Sbjct: 267 QGGSNM-----MPGPSMGE-LMAGCGGSLPSDFRPNGRDMGFGQ---LDSVGRPGREPHP 326

Query: 153 LPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFAN 212
           LPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N
Sbjct: 327 LPPDVSNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFEN 386

Query: 213 PACAATAMSALQ 224
            ACAATA+SALQ
Sbjct: 387 SACAATALSALQ 388

[Close]

BLAST of MC04g1332 vs. ExPASy Swiss-Prot
Match: A1A6K6 (Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.7e-48
Identity = 118/225 (52.44%), Postives = 140/225 (62.22%), Query Frame = 0


Query: 1   MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQT 60
           MAD YWN+Q Q   P  G +KRPR+D+E PSS +  GH    Y   +D   P    DT+T
Sbjct: 1   MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDLDVP----DTRT 60

Query: 61  IGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA 120
           IGSAYDRYLQSVQ     SGE    G + M R        G  +      D  ++ R   
Sbjct: 61  IGSAYDRYLQSVQ-----SGE---GGSVSMGRSGGGGGGGGGNV---QTIDDFMLRRGGV 120

Query: 121 VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFR 180
           +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFR
Sbjct: 121 LPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNCSRREVAHIFR 180

Query: 181 PFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 225
           PFVGY+E+RLV+K+SKHR GDP++LCFVDF NPACAATA+SALQG
Sbjct: 181 PFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQG 202

[Close]

BLAST of MC04g1332 vs. ExPASy Swiss-Prot
Match: Q6JB11 (Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-27
Identity = 59/88 (67.05%), Postives = 72/88 (81.82%), Query Frame = 0


Query: 139 MDS--MTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKH 198
           MDS  M   GR   PLPPDAS+TLY+EGLP++ +RREV+HIFRPFVG++E+RLV+KES+H
Sbjct: 17  MDSRGMGYGGRPEPPLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRH 76

Query: 199 RGGDPLILCFVDFANPACAATAMSALQG 225
            GGDP +LCFVDF NPA A  A+ ALQG
Sbjct: 77  PGGDPHVLCFVDFDNPAQATIALEALQG 104

[Close]

BLAST of MC04g1332 vs. NCBI nr
Match: XP_022141348.1 (RNA-binding protein 2-like [Momordica charantia])

HSP 1 Score: 461 bits (1187), Expect = 1.54e-163
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP
Sbjct: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. NCBI nr
Match: XP_008441534.1 (PREDICTED: RNA-binding protein 2 [Cucumis melo] >XP_008441535.1 PREDICTED: RNA-binding protein 2 [Cucumis melo])

HSP 1 Score: 434 bits (1115), Expect = 1.45e-152
Identity = 207/224 (92.41%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRP
Sbjct: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. NCBI nr
Match: KAE8647163.1 (hypothetical protein Csa_018814 [Cucumis sativus])

HSP 1 Score: 433 bits (1113), Expect = 2.94e-152
Identity = 206/224 (91.96%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRP
Sbjct: 121 SPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. NCBI nr
Match: XP_031743542.1 (RNA-binding protein 2 isoform X8 [Cucumis sativus])

HSP 1 Score: 433 bits (1113), Expect = 3.51e-152
Identity = 206/224 (91.96%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRP
Sbjct: 121 SPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. NCBI nr
Match: XP_031743541.1 (RNA-binding protein 2 isoform X7 [Cucumis sativus])

HSP 1 Score: 433 bits (1113), Expect = 4.86e-152
Identity = 206/224 (91.96%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLTSDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLAPNGRN+EYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRP
Sbjct: 121 SPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. ExPASy TrEMBL
Match: A0A6J1CKA2 (RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011769 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 7.46e-164
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP
Sbjct: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. ExPASy TrEMBL
Match: A0A1S3B4F0 (RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103485638 PE=4 SV=1)

HSP 1 Score: 434 bits (1115), Expect = 7.04e-153
Identity = 207/224 (92.41%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSP MLKRPR DYELP+SGL TGH+MHNYL SDDRGGPR+VKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPAMLKRPRTDYELPASGLSTGHDMHNYLASDDRGGPRSVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RPVANRMPVG+RMPGP +PDP+VMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPVANRMPVGNRMPGPLLPDPIVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLAPNGRNIEYGNHLP+DSM+RPGRETVPLPPDASNTLYVEGLP DSSRREVAHIFRP
Sbjct: 121 SPDLAPNGRNIEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. ExPASy TrEMBL
Match: A0A6J1E3U2 (RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430572 PE=4 SV=1)

HSP 1 Score: 416 bits (1070), Expect = 5.26e-146
Identity = 202/224 (90.18%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPGMLKRPR +YELPSSG P GH+MHN+L SDDR GP AVKDTQ I
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRAEYELPSSGFPPGHDMHNHLASDDRSGPPAVKDTQAI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSS  SGEVPT G+MGM RP+ANR+PVGSRMPGPSIPDPVVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSAASGEVPTLGEMGMGRPIANRIPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDL PNGRNIEYGNHLP++SM RPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP
Sbjct: 121 SPDLTPNGRNIEYGNHLPVESMNRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFAN ACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANAACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. ExPASy TrEMBL
Match: A0A6J1JXN9 (RNA-binding protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489771 PE=4 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 8.40e-145
Identity = 199/224 (88.84%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPGMLKRPR +YE PSSGLP  HEMHNY+ +DD GGPRAVKDTQTI
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRTEYEPPSSGLPAVHEMHNYIANDDHGGPRAVKDTQTI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSSF SGEVPTHG+MGM RP+ANRMP+G+RMPGP +PDPVVMSRP AV
Sbjct: 61  GSAYDRYLQSVQLSSFTSGEVPTHGEMGMGRPLANRMPIGNRMPGPLLPDPVVMSRPLAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLA NGRNIEYGNHLP+DS  RP RETVPLPPDA+NTLYVEGLPSDSSRREVAHIFRP
Sbjct: 121 SPDLALNGRNIEYGNHLPVDSTNRPIRETVPLPPDATNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLV+KESKHRGGDPLILCFVDFANPACAATAMSALQG
Sbjct: 181 FVGYKELRLVTKESKHRGGDPLILCFVDFANPACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. ExPASy TrEMBL
Match: A0A6J1JRD4 (RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486876 PE=4 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 8.71e-145
Identity = 201/224 (89.73%), Postives = 211/224 (94.20%), Query Frame = 0


Query: 1   MADDYWNRQQPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQTI 60
           MADDYWNRQQPLLPSPGMLKRPR +YELPSSG P GH+MH++L SDDR GP AVKDTQ I
Sbjct: 1   MADDYWNRQQPLLPSPGMLKRPRVEYELPSSGFPPGHDMHSHLSSDDRSGPPAVKDTQAI 60

Query: 61  GSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPAV 120
           GSAYDRYLQSVQLSS  SGEVPT G+MGM RP+ANR+PVGSRMPGPSIPDPVVMSRPPAV
Sbjct: 61  GSAYDRYLQSVQLSSAASGEVPTLGEMGMGRPIANRIPVGSRMPGPSIPDPVVMSRPPAV 120

Query: 121 SPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180
           SPDLAPNGRNIEYGNHLP++S+ RPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP
Sbjct: 121 SPDLAPNGRNIEYGNHLPVESINRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFRP 180

Query: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
           FVGYKELRLVSKESKHRGGDPLILCFVDFAN ACAATAMSALQG
Sbjct: 181 FVGYKELRLVSKESKHRGGDPLILCFVDFANAACAATAMSALQG 224

[Close]

BLAST of MC04g1332 vs. TAIR 10
Match: AT1G21320.2 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 226.5 bits (576), Expect = 2.2e-59
Identity = 124/230 (53.91%), Postives = 163/230 (70.87%), Query Frame = 0


Query: 1   MADDYWNRQQ----PLLPSPGML--KRPRNDYELPSSGLPTGHEMHNYLVSD-DRGGPRA 60
           MAD+YWN+Q+    P+  +P +L  KRPR+D++     +P+G +MH+YL  D DRG P +
Sbjct: 1   MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSG-DMHSYLSQDEDRGIPHS 60

Query: 61  VKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVV 120
           VKDT++IGSAYDRYLQS+Q     S E      +GM R   + M     MPGPS+ + ++
Sbjct: 61  VKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNM-----MPGPSMGE-LM 120

Query: 121 MSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRRE 180
                ++  D  PNGR++ +G    +DS+ RPGRE  PLPPD SNTLYVEGLPS+ SRRE
Sbjct: 121 AGCGGSLPSDFRPNGRDMGFGQ---LDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRRE 180

Query: 181 VAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQ 224
           V+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N ACAATA+SALQ
Sbjct: 181 VSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQ 220

[Close]

BLAST of MC04g1332 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 203.8 bits (517), Expect = 1.5e-52
Identity = 109/192 (56.77%), Postives = 139/192 (72.40%), Query Frame = 0


Query: 33  LPTGHEMHNYLVSD-DRGGPRAVKDTQTIGSAYDRYLQSVQLSSFNSGEVPTHGDMGMAR 92
           +P+G +MH+YL  D DRG P +VKDT++IGSAYDRYLQS+Q     S E      +GM R
Sbjct: 207 IPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVR 266

Query: 93  PVANRMPVGSRMPGPSIPDPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVP 152
              + M     MPGPS+ + ++     ++  D  PNGR++ +G    +DS+ RPGRE  P
Sbjct: 267 QGGSNM-----MPGPSMGE-LMAGCGGSLPSDFRPNGRDMGFGQ---LDSVGRPGREPHP 326

Query: 153 LPPDASNTLYVEGLPSDSSRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFAN 212
           LPPD SNTLYVEGLPS+ SRREV+HIFRPFVGY+E+RLV+++SKHR GDP +LCFVDF N
Sbjct: 327 LPPDVSNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFEN 386

Query: 213 PACAATAMSALQ 224
            ACAATA+SALQ
Sbjct: 387 SACAATALSALQ 388

[Close]

BLAST of MC04g1332 vs. TAIR 10
Match: AT1G76940.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.2e-49
Identity = 118/225 (52.44%), Postives = 140/225 (62.22%), Query Frame = 0


Query: 1   MADDYWNRQ-QPLLPSPGMLKRPRNDYELPSSGLPTGHEMHNYLVSDDRGGPRAVKDTQT 60
           MAD YWN+Q Q   P  G +KRPR+D+E PSS +  GH    Y   +D   P    DT+T
Sbjct: 1   MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDLDVP----DTRT 60

Query: 61  IGSAYDRYLQSVQLSSFNSGEVPTHGDMGMARPVANRMPVGSRMPGPSIPDPVVMSRPPA 120
           IGSAYDRYLQSVQ     SGE    G + M R        G  +      D  ++ R   
Sbjct: 61  IGSAYDRYLQSVQ-----SGE---GGSVSMGRSGGGGGGGGGNV---QTIDDFMLRRGGV 120

Query: 121 VSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDSSRREVAHIFR 180
           +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ SRREVAHIFR
Sbjct: 121 LPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNCSRREVAHIFR 180

Query: 181 PFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 225
           PFVGY+E+RLV+K+SKHR GDP++LCFVDF NPACAATA+SALQG
Sbjct: 181 PFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQG 202

[Close]

BLAST of MC04g1332 vs. TAIR 10
Match: AT1G76940.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-33
Identity = 71/115 (61.74%), Postives = 84/115 (73.04%), Query Frame = 0


Query: 110 DPVVMSRPPAVSPDLAPNGRNIEYGNHLPMDSMTRPGRETVPLPPDASNTLYVEGLPSDS 169
           D  ++ R   +  D  PNG  I +    P+      GR    LP DASNTLYVEGLPS+ 
Sbjct: 42  DDFMLRRGGVLPLDHGPNGHTIGFDPPEPV------GRRN--LPSDASNTLYVEGLPSNC 101

Query: 170 SRREVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 225
           SRREVAHIFRPFVGY+E+RLV+K+SKHR GDP++LCFVDF NPACAATA+SALQG
Sbjct: 102 SRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQG 148

The following BLAST results are available for this feature:

BLAST of MC04g1332 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
G7ID19	5.7e-73	60.79	RNA-binding protein 2 OS=Medicago truncatula OX=3880 GN=RBP2 PE=2 SV=1	[more]
Q8H0P8	1.4e-71	63.11	RNA-binding protein 1 OS=Medicago truncatula OX=3880 GN=RBP1 PE=2 SV=1	[more]
F4HWF9	2.1e-51	56.77	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]
A1A6K6	1.7e-48	52.44	Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana OX=3702 GN=NSRA PE...	[more]
Q6JB11	2.8e-27	67.05	Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays OX=4577 GN=MEG5 PE=2 SV=1	[more]

BLAST of MC04g1332 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141348.1	1.54e-163	100.00	RNA-binding protein 2-like [Momordica charantia]	[more]
XP_008441534.1	1.45e-152	92.41	PREDICTED: RNA-binding protein 2 [Cucumis melo] >XP_008441535.1 PREDICTED: RNA-b...	[more]
KAE8647163.1	2.94e-152	91.96	hypothetical protein Csa_018814 [Cucumis sativus]	[more]
XP_031743542.1	3.51e-152	91.96	RNA-binding protein 2 isoform X8 [Cucumis sativus]	[more]
XP_031743541.1	4.86e-152	91.96	RNA-binding protein 2 isoform X7 [Cucumis sativus]	[more]

BLAST of MC04g1332 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKA2	7.46e-164	100.00	RNA-binding protein 2-like OS=Momordica charantia OX=3673 GN=LOC111011769 PE=4 S...	[more]
A0A1S3B4F0	7.04e-153	92.41	RNA-binding protein 2 OS=Cucumis melo OX=3656 GN=LOC103485638 PE=4 SV=1	[more]
A0A6J1E3U2	5.26e-146	90.18	RNA-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430572 PE=4 SV...	[more]
A0A6J1JXN9	8.40e-145	88.84	RNA-binding protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11148977...	[more]
A0A6J1JRD4	8.71e-145	89.73	RNA-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486876 PE=4 SV=1	[more]

BLAST of MC04g1332 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21320.2	2.2e-59	53.91	nucleotide binding;nucleic acid binding	[more]
AT1G21320.1	1.5e-52	56.77	nucleotide binding;nucleic acid binding	[more]
AT1G76940.1	1.2e-49	52.44	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G76940.2	5.9e-33	61.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 160..224 e-value: 1.2E-7 score: 31.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 158..224 score: 10.274912
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 154..224 e-value: 1.7E-14 score: 55.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	PANTHER	PTHR10501	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B	coord: 8..224
None	No IPR available	PANTHER	PTHR10501:SF53	NUCLEAR SPECKLE RNA-BINDING PROTEIN A-RELATED	coord: 8..224
None	No IPR available	CDD	cd12420	RRM_RBPMS_like	coord: 158..224 e-value: 2.59608E-31 score: 108.126
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 133..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1332.1	MC04g1332.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding