MC04g1062 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g1062
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Germin-like protein
Location	MC04: 18686077 .. 18686625 (+)
RNA-Seq Expression	MC04g1062
Synteny	MC04g1062

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGCAACAGGAATAAAAGTGAATGGATTTGCGTGCAAGGACGAGGCGAACGTAAGCGCATCAGACTTCTTCTTCGCGGGACTAGCCAACGCCCCCGCCATCAACAACTCGCTCGGCTTCGCGGCGACGGTGGCCGACGTCAACGCAATCCCCGGCCTCAACACCCTCGGCCTTTCCCTCGCCCGCGTCGAGTACTCACCGGGCGGCGGCCTCGTCCCCCCTCACGTGCATCCACGCGCCACCGAGGTTGTGTTCGTGCTCGACGGCGTGCTGGACGTGGGCCTCATCACCACCGCCAACAAACTGGTCGCAAAAACCATAAAAAAAGGCGACGTGTTCGTGTTCCCCAAGGGCCTGCTCCACTTCCAGCGCAACAGTTACGACAGGCCTGCCTCCGCTTTCATCGTCTTCAACAGCCAGCTGTTCGGAACCCAGAGTGTCGCCCCCGCCTTGTTCGGTGCCTCGCCCGCCGTTGACGACGCCGTCCTCGCCGGAACTTTTCAGATTGGTGTTGACGTGGTGGCCCAGATTAAATCCAACATAGCTCCT

mRNA sequence

TTGGCAACAGGAATAAAAGTGAATGGATTTGCGTGCAAGGACGAGGCGAACGTAAGCGCATCAGACTTCTTCTTCGCGGGACTAGCCAACGCCCCCGCCATCAACAACTCGCTCGGCTTCGCGGCGACGGTGGCCGACGTCAACGCAATCCCCGGCCTCAACACCCTCGGCCTTTCCCTCGCCCGCGTCGAGTACTCACCGGGCGGCGGCCTCGTCCCCCCTCACGTGCATCCACGCGCCACCGAGGTTGTGTTCGTGCTCGACGGCGTGCTGGACGTGGGCCTCATCACCACCGCCAACAAACTGGTCGCAAAAACCATAAAAAAAGGCGACGTGTTCGTGTTCCCCAAGGGCCTGCTCCACTTCCAGCGCAACAGTTACGACAGGCCTGCCTCCGCTTTCATCGTCTTCAACAGCCAGCTGTTCGGAACCCAGAGTGTCGCCCCCGCCTTGTTCGGTGCCTCGCCCGCCGTTGACGACGCCGTCCTCGCCGGAACTTTTCAGATTGGTGTTGACGTGGTGGCCCAGATTAAATCCAACATAGCTCCT

Coding sequence (CDS)

TTGGCAACAGGAATAAAAGTGAATGGATTTGCGTGCAAGGACGAGGCGAACGTAAGCGCATCAGACTTCTTCTTCGCGGGACTAGCCAACGCCCCCGCCATCAACAACTCGCTCGGCTTCGCGGCGACGGTGGCCGACGTCAACGCAATCCCCGGCCTCAACACCCTCGGCCTTTCCCTCGCCCGCGTCGAGTACTCACCGGGCGGCGGCCTCGTCCCCCCTCACGTGCATCCACGCGCCACCGAGGTTGTGTTCGTGCTCGACGGCGTGCTGGACGTGGGCCTCATCACCACCGCCAACAAACTGGTCGCAAAAACCATAAAAAAAGGCGACGTGTTCGTGTTCCCCAAGGGCCTGCTCCACTTCCAGCGCAACAGTTACGACAGGCCTGCCTCCGCTTTCATCGTCTTCAACAGCCAGCTGTTCGGAACCCAGAGTGTCGCCCCCGCCTTGTTCGGTGCCTCGCCCGCCGTTGACGACGCCGTCCTCGCCGGAACTTTTCAGATTGGTGTTGACGTGGTGGCCCAGATTAAATCCAACATAGCTCCT

Protein sequence

LATGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARVEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQRNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIAP

Homology

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BLAST of MC04g1062 vs. ExPASy Swiss-Prot
Match: Q9M263 (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-58
Identity = 114/182 (62.64%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 3   TGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLAR 62
           +GIKVNGF CK E+N++ASDFFFAG+     +NN++G A T A+V  I GLNTLG+SLAR
Sbjct: 37  SGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLAR 96

Query: 63  VEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHF 122
           ++Y+P GGL PPH HPRATEV+FVL+G LDVG ITTANKL AKT+KKG+VFVFP+GL+H+
Sbjct: 97  IDYAP-GGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHY 156

Query: 123 QRNS-YDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNI 182
           Q+N+   +PAS    FNSQL GTQS+A  LF A+PA+ D VL  TFQIG   + +IKS  
Sbjct: 157 QKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKF 216

Query: 183 AP 184
           AP
Sbjct: 217 AP 217

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BLAST of MC04g1062 vs. ExPASy Swiss-Prot
Match: P94014 (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-55
Identity = 108/183 (59.02%), Postives = 134/183 (73.22%), Query Frame = 0


Query: 1   LATGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSL 60
           L +GIK+NGF CKD A V+++DFF  GLA     NN+ G   T A+V  IPGLNTLG+SL
Sbjct: 36  LPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSL 95

Query: 61  ARVEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLL 120
           +R++Y+P GGL PPH HPRATEVVFVL+G LDVG +TTANKL+++++KKGDVF FPKGL+
Sbjct: 96  SRIDYAP-GGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLV 155

Query: 121 HFQRNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSN 180
           HFQ+N+ D PAS    FNSQL GTQS+   LFG++P V D +LA  FQ     V  IKS 
Sbjct: 156 HFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIKSK 215

Query: 181 IAP 184
             P
Sbjct: 216 FQP 217

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BLAST of MC04g1062 vs. ExPASy Swiss-Prot
Match: Q6I544 (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.7e-54
Identity = 111/183 (60.66%), Postives = 133/183 (72.68%), Query Frame = 0


Query: 1   LATGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSL 60
           L + +KVNGFACK  A V+  DF+F GLA A   NN+ G   T A+V  +PGLNTLG+S+
Sbjct: 39  LTSAVKVNGFACK--AAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSM 98

Query: 61  ARVEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLL 120
           +R++Y+P GGL PPH HPRATE+VFVL G LDVG ITTANKL  KTI  GDVFVFP+GLL
Sbjct: 99  SRIDYAP-GGLNPPHTHPRATEMVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLL 158

Query: 121 HFQRNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSN 180
           HFQ+N+ D PA+    FNSQL GTQS+A  LF ASP V D VL   FQ+G   V +IKS 
Sbjct: 159 HFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSR 218

Query: 181 IAP 184
           +AP
Sbjct: 219 LAP 218

[Close]

BLAST of MC04g1062 vs. ExPASy Swiss-Prot
Match: Q9FZ27 (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.1e-53
Identity = 106/179 (59.22%), Postives = 134/179 (74.86%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           G K+NGF CK+  N++ SDFFFAG++    IN+++G A T A+V  IPGLNTL +SLAR+
Sbjct: 39  GTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARI 98

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +Y+P GGL PPH HPRATEVV+VL+G L+VG ITTANKL  KTIK G+VFVFP+GL+HFQ
Sbjct: 99  DYAP-GGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQ 158

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIA 183
           +N+   PAS    FNSQL GT SVA  LF A PA+ + VL  TFQ+G  +V +IK  +A
Sbjct: 159 KNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLA 216

[Close]

BLAST of MC04g1062 vs. ExPASy Swiss-Prot
Match: Q94EG3 (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-50
Identity = 105/183 (57.38%), Postives = 132/183 (72.13%), Query Frame = 0


Query: 1   LATGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSL 60
           L + +KVNGF CK   N +A+DF    ++   A NN  G   T A+V  +PGLNTLG+SL
Sbjct: 46  LHSKVKVNGFPCK--TNFTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSL 105

Query: 61  ARVEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLL 120
           AR++Y+P GG+ PPH HPRA+E+VFV++G LDVG ITTAN LV+K I KG+VFVFP+GL+
Sbjct: 106 ARIDYAP-GGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLV 165

Query: 121 HFQRNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSN 180
           HFQ+N+ + PA+    FNSQL GTQS+   LFGASP V D VLA TFQI  + V QIKS 
Sbjct: 166 HFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSK 225

Query: 181 IAP 184
            AP
Sbjct: 226 FAP 225

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BLAST of MC04g1062 vs. NCBI nr
Match: XP_022146354.1 (germin-like protein subfamily 2 member 4 [Momordica charantia])

HSP 1 Score: 282 bits (722), Expect = 7.54e-94
Identity = 148/180 (82.22%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           GIKVNGF CKDEANV+A DFFFAGLANA AINNS+G A T A+V+ IPGLNTLG+SLARV
Sbjct: 46  GIKVNGFPCKDEANVTALDFFFAGLANAAAINNSVGSAVTAANVDKIPGLNTLGVSLARV 105

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +YSP GGL PPHVHPRATE+VFVLDG LDVG ITTANKLVAKTIKKG+VFVFPKGLLHFQ
Sbjct: 106 DYSPAGGLNPPHVHPRATEIVFVLDGELDVGFITTANKLVAKTIKKGEVFVFPKGLLHFQ 165

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIAP 183
           RNS D+PAS    FNSQL GTQSVA ALFGASPAVDDAVLAG FQIG  VV QIKS IAP
Sbjct: 166 RNSKDKPASVIAAFNSQLPGTQSVAAALFGASPAVDDAVLAGAFQIGGVVVGQIKSKIAP 225

[Close]

BLAST of MC04g1062 vs. NCBI nr
Match: KAA0050257.1 (germin-like protein subfamily 2 member 4 [Cucumis melo var. makuwa] >TYJ98151.1 germin-like protein subfamily 2 member 4 [Cucumis melo var. makuwa])

HSP 1 Score: 259 bits (663), Expect = 1.68e-85
Identity = 130/183 (71.04%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 1   LATGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSL 60
           + TG KVNGF CK + NV+ASDFFFAGLAN  AINNS+G   T A+V+ IPGLNTLG+SL
Sbjct: 1   MVTGTKVNGFPCKADTNVTASDFFFAGLANPAAINNSVGSVVTPANVDKIPGLNTLGVSL 60

Query: 61  ARVEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLL 120
           AR++YSP GGL PPH+HPRATE+VF+LDG LDVG +TTANKL++KTIKKG+VFVFPKGLL
Sbjct: 61  ARIDYSPDGGLNPPHIHPRATEIVFILDGELDVGFVTTANKLISKTIKKGEVFVFPKGLL 120

Query: 121 HFQRNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSN 180
           HFQ+N  D+PAS    FNSQL GT SVA ALF +SPAVDD +LA TFQIG D V +IKS 
Sbjct: 121 HFQQNKKDKPASVLSAFNSQLPGTVSVAAALFSSSPAVDDGLLAKTFQIGTDEVGEIKSK 180

Query: 181 IAP 183
           IAP
Sbjct: 181 IAP 183

[Close]

BLAST of MC04g1062 vs. NCBI nr
Match: XP_038877903.1 (germin-like protein subfamily 2 member 4 [Benincasa hispida] >XP_038877904.1 germin-like protein subfamily 2 member 4 [Benincasa hispida])

HSP 1 Score: 259 bits (662), Expect = 8.27e-85
Identity = 129/180 (71.67%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           GIKVNGF CK++ N++ASDFFFAGLA   AINNS+G A T+A+V+ IPGLNTLG+S AR+
Sbjct: 41  GIKVNGFPCKEDTNITASDFFFAGLAKPAAINNSVGSAVTLANVDKIPGLNTLGISFARI 100

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +YSP GGL PPH+HPRATE+VFVLDG LDVG ITTANKL++KTIKKG++FVFPKGLLHFQ
Sbjct: 101 DYSPDGGLNPPHIHPRATEIVFVLDGELDVGFITTANKLISKTIKKGEIFVFPKGLLHFQ 160

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIAP 183
           +N  D+PAS    FNSQL GT SVA ALF +SP VDD VLA TFQIG D V +IKS IAP
Sbjct: 161 QNKKDKPASVIAAFNSQLPGTLSVAAALFSSSPPVDDGVLARTFQIGADEVGEIKSKIAP 220

[Close]

BLAST of MC04g1062 vs. NCBI nr
Match: XP_008466192.1 (PREDICTED: germin-like protein subfamily 2 member 4 [Cucumis melo])

HSP 1 Score: 256 bits (655), Expect = 9.59e-84
Identity = 130/180 (72.22%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           G KVNGF CK   NV+ SDFFFAGLAN  AINNS+G A T A+V+ IPGLNTLG+SLAR+
Sbjct: 41  GTKVNGFPCKAATNVTTSDFFFAGLANPAAINNSVGSAVTPANVDKIPGLNTLGVSLARI 100

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +YSP GGL PPH+HPRATE+VF+LDG LDVG ITTANKL++KTIKKG+VFVFPKGLLHFQ
Sbjct: 101 DYSPNGGLNPPHIHPRATEIVFILDGELDVGFITTANKLISKTIKKGEVFVFPKGLLHFQ 160

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIAP 183
           +N  D+PAS    FNSQL GT SVA ALF +SPAVDD +LA TFQIG D V +IKS IAP
Sbjct: 161 QNKKDKPASVLSAFNSQLPGTVSVAAALFSSSPAVDDGLLAKTFQIGTDEVGEIKSKIAP 220

[Close]

BLAST of MC04g1062 vs. NCBI nr
Match: XP_008466206.1 (PREDICTED: germin-like protein subfamily 2 member 4 [Cucumis melo])

HSP 1 Score: 256 bits (654), Expect = 1.27e-83
Identity = 124/180 (68.89%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           GIKVNGF CK++ N++ASDFFFAGLA    +NNS+GFAAT A+V+++PGLNTLG+SL RV
Sbjct: 41  GIKVNGFPCKEDTNITASDFFFAGLATPAVVNNSIGFAATQANVDSVPGLNTLGISLNRV 100

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           EYSP GGLVPPH HPRATE++F+L+G LDVG ITTANKL++KTIKKG+VFVFP GLLH+Q
Sbjct: 101 EYSPNGGLVPPHTHPRATEIIFILEGELDVGFITTANKLISKTIKKGEVFVFPVGLLHYQ 160

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIAP 183
           +N+ D+PASA + FNSQL G   VAPALF +SPA+D+ VL  TFQIG D V +IKS  AP
Sbjct: 161 QNNKDKPASAIVAFNSQLPGILVVAPALFSSSPAIDNDVLGRTFQIGTDKVGEIKSRFAP 220

[Close]

BLAST of MC04g1062 vs. ExPASy TrEMBL
Match: A0A6J1CXW0 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111015585 PE=3 SV=1)

HSP 1 Score: 282 bits (722), Expect = 3.65e-94
Identity = 148/180 (82.22%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           GIKVNGF CKDEANV+A DFFFAGLANA AINNS+G A T A+V+ IPGLNTLG+SLARV
Sbjct: 46  GIKVNGFPCKDEANVTALDFFFAGLANAAAINNSVGSAVTAANVDKIPGLNTLGVSLARV 105

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +YSP GGL PPHVHPRATE+VFVLDG LDVG ITTANKLVAKTIKKG+VFVFPKGLLHFQ
Sbjct: 106 DYSPAGGLNPPHVHPRATEIVFVLDGELDVGFITTANKLVAKTIKKGEVFVFPKGLLHFQ 165

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIAP 183
           RNS D+PAS    FNSQL GTQSVA ALFGASPAVDDAVLAG FQIG  VV QIKS IAP
Sbjct: 166 RNSKDKPASVIAAFNSQLPGTQSVAAALFGASPAVDDAVLAGAFQIGGVVVGQIKSKIAP 225

[Close]

BLAST of MC04g1062 vs. ExPASy TrEMBL
Match: A0A5A7U7A8 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00310 PE=3 SV=1)

HSP 1 Score: 259 bits (663), Expect = 8.12e-86
Identity = 130/183 (71.04%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 1   LATGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSL 60
           + TG KVNGF CK + NV+ASDFFFAGLAN  AINNS+G   T A+V+ IPGLNTLG+SL
Sbjct: 1   MVTGTKVNGFPCKADTNVTASDFFFAGLANPAAINNSVGSVVTPANVDKIPGLNTLGVSL 60

Query: 61  ARVEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLL 120
           AR++YSP GGL PPH+HPRATE+VF+LDG LDVG +TTANKL++KTIKKG+VFVFPKGLL
Sbjct: 61  ARIDYSPDGGLNPPHIHPRATEIVFILDGELDVGFVTTANKLISKTIKKGEVFVFPKGLL 120

Query: 121 HFQRNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSN 180
           HFQ+N  D+PAS    FNSQL GT SVA ALF +SPAVDD +LA TFQIG D V +IKS 
Sbjct: 121 HFQQNKKDKPASVLSAFNSQLPGTVSVAAALFSSSPAVDDGLLAKTFQIGTDEVGEIKSK 180

Query: 181 IAP 183
           IAP
Sbjct: 181 IAP 183

[Close]

BLAST of MC04g1062 vs. ExPASy TrEMBL
Match: A0A1S3CQM8 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503679 PE=3 SV=1)

HSP 1 Score: 256 bits (655), Expect = 4.65e-84
Identity = 130/180 (72.22%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           G KVNGF CK   NV+ SDFFFAGLAN  AINNS+G A T A+V+ IPGLNTLG+SLAR+
Sbjct: 41  GTKVNGFPCKAATNVTTSDFFFAGLANPAAINNSVGSAVTPANVDKIPGLNTLGVSLARI 100

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +YSP GGL PPH+HPRATE+VF+LDG LDVG ITTANKL++KTIKKG+VFVFPKGLLHFQ
Sbjct: 101 DYSPNGGLNPPHIHPRATEIVFILDGELDVGFITTANKLISKTIKKGEVFVFPKGLLHFQ 160

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIAP 183
           +N  D+PAS    FNSQL GT SVA ALF +SPAVDD +LA TFQIG D V +IKS IAP
Sbjct: 161 QNKKDKPASVLSAFNSQLPGTVSVAAALFSSSPAVDDGLLAKTFQIGTDEVGEIKSKIAP 220

[Close]

BLAST of MC04g1062 vs. ExPASy TrEMBL
Match: A0A1S3CQN9 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503687 PE=3 SV=1)

HSP 1 Score: 256 bits (654), Expect = 6.17e-84
Identity = 124/180 (68.89%), Postives = 151/180 (83.89%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           GIKVNGF CK++ N++ASDFFFAGLA    +NNS+GFAAT A+V+++PGLNTLG+SL RV
Sbjct: 41  GIKVNGFPCKEDTNITASDFFFAGLATPAVVNNSIGFAATQANVDSVPGLNTLGISLNRV 100

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           EYSP GGLVPPH HPRATE++F+L+G LDVG ITTANKL++KTIKKG+VFVFP GLLH+Q
Sbjct: 101 EYSPNGGLVPPHTHPRATEIIFILEGELDVGFITTANKLISKTIKKGEVFVFPVGLLHYQ 160

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIAP 183
           +N+ D+PASA + FNSQL G   VAPALF +SPA+D+ VL  TFQIG D V +IKS  AP
Sbjct: 161 QNNKDKPASAIVAFNSQLPGILVVAPALFSSSPAIDNDVLGRTFQIGTDKVGEIKSRFAP 220

[Close]

BLAST of MC04g1062 vs. ExPASy TrEMBL
Match: A0A6J1JZY0 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489804 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 3.72e-81
Identity = 125/179 (69.83%), Postives = 148/179 (82.68%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           G KVNGF CK++AN++A+DFFF GLANA  INNS+G   T A+VN IPGLNTLG+SLAR+
Sbjct: 42  GTKVNGFPCKEDANITAADFFFTGLANAATINNSVGSTVTPANVNKIPGLNTLGVSLARI 101

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +Y+  GGL PPHVHPRATE+VFVLDG LDVG ITTANKL++KTIKKG++FVFPKGLLHFQ
Sbjct: 102 DYAADGGLNPPHVHPRATEIVFVLDGELDVGFITTANKLISKTIKKGEIFVFPKGLLHFQ 161

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIA 182
           +N+ D+PAS    FNSQL GT SVA ALF +SPAVD+ VLA  FQI  +VV +IKS IA
Sbjct: 162 QNNKDKPASVIAAFNSQLPGTVSVAAALFSSSPAVDNGVLARAFQIDAEVVGEIKSKIA 220

[Close]

BLAST of MC04g1062 vs. TAIR 10
Match: AT3G62020.1 (germin-like protein 10 )

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-59
Identity = 114/182 (62.64%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 3   TGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLAR 62
           +GIKVNGF CK E+N++ASDFFFAG+     +NN++G A T A+V  I GLNTLG+SLAR
Sbjct: 37  SGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLAR 96

Query: 63  VEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHF 122
           ++Y+P GGL PPH HPRATEV+FVL+G LDVG ITTANKL AKT+KKG+VFVFP+GL+H+
Sbjct: 97  IDYAP-GGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHY 156

Query: 123 QRNS-YDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNI 182
           Q+N+   +PAS    FNSQL GTQS+A  LF A+PA+ D VL  TFQIG   + +IKS  
Sbjct: 157 QKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKF 216

Query: 183 AP 184
           AP
Sbjct: 217 AP 217

[Close]

BLAST of MC04g1062 vs. TAIR 10
Match: AT3G62020.2 (germin-like protein 10 )

HSP 1 Score: 226.5 bits (576), Expect = 1.8e-59
Identity = 114/181 (62.98%), Postives = 141/181 (77.90%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           GIKVNGF CK E+N++ASDFFFAG+     +NN++G A T A+V  I GLNTLG+SLAR+
Sbjct: 9   GIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARI 68

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +Y+P GGL PPH HPRATEV+FVL+G LDVG ITTANKL AKT+KKG+VFVFP+GL+H+Q
Sbjct: 69  DYAP-GGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQ 128

Query: 124 RNS-YDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIA 183
           +N+   +PAS    FNSQL GTQS+A  LF A+PA+ D VL  TFQIG   + +IKS  A
Sbjct: 129 KNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFA 188

[Close]

BLAST of MC04g1062 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 215.3 bits (547), Expect = 4.1e-56
Identity = 108/183 (59.02%), Postives = 134/183 (73.22%), Query Frame = 0


Query: 1   LATGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSL 60
           L +GIK+NGF CKD A V+++DFF  GLA     NN+ G   T A+V  IPGLNTLG+SL
Sbjct: 36  LPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSL 95

Query: 61  ARVEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLL 120
           +R++Y+P GGL PPH HPRATEVVFVL+G LDVG +TTANKL+++++KKGDVF FPKGL+
Sbjct: 96  SRIDYAP-GGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLV 155

Query: 121 HFQRNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSN 180
           HFQ+N+ D PAS    FNSQL GTQS+   LFG++P V D +LA  FQ     V  IKS 
Sbjct: 156 HFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTPPVPDNILAQAFQTSPGTVKHIKSK 215

Query: 181 IAP 184
             P
Sbjct: 216 FQP 217

[Close]

BLAST of MC04g1062 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 209.5 bits (532), Expect = 2.2e-54
Identity = 106/179 (59.22%), Postives = 134/179 (74.86%), Query Frame = 0


Query: 4   GIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSLARV 63
           G K+NGF CK+  N++ SDFFFAG++    IN+++G A T A+V  IPGLNTL +SLAR+
Sbjct: 39  GTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARI 98

Query: 64  EYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLLHFQ 123
           +Y+P GGL PPH HPRATEVV+VL+G L+VG ITTANKL  KTIK G+VFVFP+GL+HFQ
Sbjct: 99  DYAP-GGLNPPHTHPRATEVVYVLEGELEVGFITTANKLFTKTIKIGEVFVFPRGLVHFQ 158

Query: 124 RNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSNIA 183
           +N+   PAS    FNSQL GT SVA  LF A PA+ + VL  TFQ+G  +V +IK  +A
Sbjct: 159 KNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKERLA 216

[Close]

BLAST of MC04g1062 vs. TAIR 10
Match: AT5G26700.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 196.4 bits (498), Expect = 1.9e-50
Identity = 99/183 (54.10%), Postives = 129/183 (70.49%), Query Frame = 0


Query: 1   LATGIKVNGFACKDEANVSASDFFFAGLANAPAINNSLGFAATVADVNAIPGLNTLGLSL 60
           L+  +KVNG+ CKD   ++  DF+F GLAN  A N S G   T A+V  +PGLNTLGLS+
Sbjct: 33  LSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSM 92

Query: 61  ARVEYSPGGGLVPPHVHPRATEVVFVLDGVLDVGLITTANKLVAKTIKKGDVFVFPKGLL 120
           +R++Y+P  GL PPHVHPRA+E++FVL+G L VG +TTA KL+AK + KGDVF FPKGL+
Sbjct: 93  SRIDYAP-NGLNPPHVHPRASEIIFVLEGQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLI 152

Query: 121 HFQRNSYDRPASAFIVFNSQLFGTQSVAPALFGASPAVDDAVLAGTFQIGVDVVAQIKSN 180
           HFQ+N  + PAS    F+SQL GTQS+  +LFGA P   D +LA +FQ+    V +IK  
Sbjct: 153 HFQKNIANSPASVLAAFDSQLPGTQSLVASLFGALP---DDILAKSFQLKHKQVKKIKLR 211

Query: 181 IAP 184
            AP
Sbjct: 213 YAP 211

The following BLAST results are available for this feature:

BLAST of MC04g1062 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M263	1.5e-58	62.64	Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP1...	[more]
P94014	5.7e-55	59.02	Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4...	[more]
Q6I544	3.7e-54	60.66	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500...	[more]
Q9FZ27	3.1e-53	59.22	Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
Q94EG3	2.5e-50	57.38	Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1...	[more]

BLAST of MC04g1062 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146354.1	7.54e-94	82.22	germin-like protein subfamily 2 member 4 [Momordica charantia]	[more]
KAA0050257.1	1.68e-85	71.04	germin-like protein subfamily 2 member 4 [Cucumis melo var. makuwa] >TYJ98151.1 ...	[more]
XP_038877903.1	8.27e-85	71.67	germin-like protein subfamily 2 member 4 [Benincasa hispida] >XP_038877904.1 ger...	[more]
XP_008466192.1	9.59e-84	72.22	PREDICTED: germin-like protein subfamily 2 member 4 [Cucumis melo]	[more]
XP_008466206.1	1.27e-83	68.89	PREDICTED: germin-like protein subfamily 2 member 4 [Cucumis melo]	[more]

BLAST of MC04g1062 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXW0	3.65e-94	82.22	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111015585 PE=3 SV=1	[more]
A0A5A7U7A8	8.12e-86	71.04	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G...	[more]
A0A1S3CQM8	4.65e-84	72.22	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503679 PE=3 SV=1	[more]
A0A1S3CQN9	6.17e-84	68.89	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503687 PE=3 SV=1	[more]
A0A6J1JZY0	3.72e-81	69.83	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489804 PE=3 SV=1	[more]

BLAST of MC04g1062 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62020.1	1.0e-59	62.64	germin-like protein 10	[more]
AT3G62020.2	1.8e-59	62.98	germin-like protein 10	[more]
AT1G09560.1	4.1e-56	59.02	germin-like protein 5	[more]
AT1G02335.1	2.2e-54	59.22	germin-like protein subfamily 2 member 2 precursor	[more]
AT5G26700.1	1.9e-50	54.10	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 138..153 score: 46.37 coord: 105..125 score: 60.35 coord: 75..95 score: 55.92
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 26..175 e-value: 2.3E-29 score: 113.6
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 28..171 e-value: 3.8E-41 score: 140.2
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 2..182 e-value: 1.6E-63 score: 215.7
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 3..181
None	No IPR available	PANTHER	PTHR31238:SF18	GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 4	coord: 3..181
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 1..181 e-value: 1.0989E-69 score: 207.833
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 70..83
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 18..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g1062.1	MC04g1062.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:2000280	regulation of root development
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0030145	manganese ion binding