MC04g0884 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g0884
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC04: 15657156 .. 15657260 (+)
RNA-Seq ExpressionMC04g0884
SyntenyMC04g0884
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAATCAGGAGCTAAATCATCAAATTCCCCATTTTTATCTCCCTTCCAAGATCCTCTGTTGCATAGTTAACATCCAATTTGCACGTATTTTTCCTTTTCTTTTT

mRNA sequence

ACAAATCAGGAGCTAAATCATCAAATTCCCCATTTTTATCTCCCTTCCAAGATCCTCTGTTGCATAGTTAACATCCAATTTGCACGTATTTTTCCTTTTCTTTTT

Coding sequence (CDS)

ACAAATCAGGAGCTAAATCATCAAATTCCCCATTTTTATCTCCCTTCCAAGATCCTCTGTTGCATAGTTAACATCCAATTTGCACGTATTTTTCCTTTTCTTTTT

Protein sequence

TNQELNHQIPHFYLPSKILCCIVNIQFARIFPFLF
Homology
BLAST of MC04g0884 vs. NCBI nr
Match: XP_008467007.2 (PREDICTED: auxin response factor 11, partial [Cucumis melo])

HSP 1 Score: 49.3 bits (116), Expect = 4.44e-06
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQELNHQIPHF LP KILC +VNI+
Sbjct: 57 TNQELNHQIPHFDLPPKILCRVVNIR 82

BLAST of MC04g0884 vs. NCBI nr
Match: KAG7025315.1 (Auxin response factor 9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 49.3 bits (116), Expect = 2.92e-05
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TN ELNHQIPHF LPSKILC +VNI+
Sbjct: 57 TNHELNHQIPHFDLPSKILCRVVNIR 82

BLAST of MC04g0884 vs. NCBI nr
Match: KAA0050656.1 (auxin response factor 18 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 2.92e-05
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQELNHQIPHF LP KILC +VNI+
Sbjct: 57 TNQELNHQIPHFDLPPKILCRVVNIR 82

BLAST of MC04g0884 vs. NCBI nr
Match: TYK07778.1 (auxin response factor 18 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 49.3 bits (116), Expect = 2.92e-05
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQELNHQIPHF LP KILC +VNI+
Sbjct: 57 TNQELNHQIPHFDLPPKILCRVVNIR 82

BLAST of MC04g0884 vs. NCBI nr
Match: PSS26273.1 (Auxin response factor like [Actinidia chinensis var. chinensis])

HSP 1 Score: 49.3 bits (116), Expect = 2.92e-05
Identity = 20/26 (76.92%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQE+N QI HFYLPSKILC ++NIQ
Sbjct: 59 TNQEINQQISHFYLPSKILCRVINIQ 84

BLAST of MC04g0884 vs. ExPASy TrEMBL
Match: A0A1S3CSJ1 (auxin response factor 11 OS=Cucumis melo OX=3656 GN=LOC103504421 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.15e-06
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQELNHQIPHF LP KILC +VNI+
Sbjct: 57 TNQELNHQIPHFDLPPKILCRVVNIR 82

BLAST of MC04g0884 vs. ExPASy TrEMBL
Match: A0A5D3C9C4 (Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00590 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.41e-05
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQELNHQIPHF LP KILC +VNI+
Sbjct: 57 TNQELNHQIPHFDLPPKILCRVVNIR 82

BLAST of MC04g0884 vs. ExPASy TrEMBL
Match: A0A5A7U902 (Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001330 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.41e-05
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQELNHQIPHF LP KILC +VNI+
Sbjct: 57 TNQELNHQIPHFDLPPKILCRVVNIR 82

BLAST of MC04g0884 vs. ExPASy TrEMBL
Match: A0A2R6RCK4 (Auxin response factor OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07566 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.41e-05
Identity = 20/26 (76.92%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQE+N QI HFYLPSKILC ++NIQ
Sbjct: 59 TNQEINQQISHFYLPSKILCRVINIQ 84

BLAST of MC04g0884 vs. ExPASy TrEMBL
Match: A0A0A0K887 (Auxin response factor OS=Cucumis sativus OX=3659 GN=Csa_7G329330 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.41e-05
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 1  TNQELNHQIPHFYLPSKILCCIVNIQ 26
          TNQELNHQIPHF LP KILC +VNI+
Sbjct: 57 TNQELNHQIPHFDLPPKILCRVVNIR 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_008467007.24.44e-0680.77PREDICTED: auxin response factor 11, partial [Cucumis melo][more]
KAG7025315.12.92e-0580.77Auxin response factor 9, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAA0050656.12.92e-0580.77auxin response factor 18 isoform X2 [Cucumis melo var. makuwa][more]
TYK07778.12.92e-0580.77auxin response factor 18 isoform X2 [Cucumis melo var. makuwa][more]
PSS26273.12.92e-0576.92Auxin response factor like [Actinidia chinensis var. chinensis][more]
Match NameE-valueIdentityDescription
A0A1S3CSJ12.15e-0680.77auxin response factor 11 OS=Cucumis melo OX=3656 GN=LOC103504421 PE=4 SV=1[more]
A0A5D3C9C41.41e-0580.77Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold17... [more]
A0A5A7U9021.41e-0580.77Auxin response factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
A0A2R6RCK41.41e-0576.92Auxin response factor OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_... [more]
A0A0A0K8871.41e-0580.77Auxin response factor OS=Cucumis sativus OX=3659 GN=Csa_7G329330 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g0884.1MC04g0884.1mRNA