MC04g0166 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g0166
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein kinase domain-containing protein
LocationMC04: 1268758 .. 1268835 (-)
RNA-Seq ExpressionMC04g0166
SyntenyMC04g0166
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGCTGTGGAATTTGATACCAATTTCGACCCTTCATTTGGTGACATCAATGGAAATCATATAGGTATTGATGTCAGT

mRNA sequence

ATCGCTGTGGAATTTGATACCAATTTCGACCCTTCATTTGGTGACATCAATGGAAATCATATAGGTATTGATGTCAGT

Coding sequence (CDS)

ATCGCTGTGGAATTTGATACCAATTTCGACCCTTCATTTGGTGACATCAATGGAAATCATATAGGTATTGATGTCAGT

Protein sequence

IAVEFDTNFDPSFGDINGNHIGIDVS
Homology
BLAST of MC04g0166 vs. ExPASy Swiss-Prot
Match: Q9FHX3 (L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3702 GN=LECRKS6 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.8e-05
Identity = 21/26 (80.77%), Postives = 22/26 (84.62%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 27
           IAVEFDT FDP  GDIN NH+GIDVS
Sbjct: 142 IAVEFDTRFDPVHGDINDNHVGIDVS 167

BLAST of MC04g0166 vs. ExPASy Swiss-Prot
Match: Q9FHG4 (Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1)

HSP 1 Score: 42.7 bits (99), Expect = 7.2e-04
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDV 26
           +A+EFDT  DP F D NGNHIG+DV
Sbjct: 145 VAIEFDTKLDPHFNDPNGNHIGLDV 169

BLAST of MC04g0166 vs. NCBI nr
Match: XP_030444506.1 (L-type lectin-domain containing receptor kinase S.6 [Syzygium oleosum])

HSP 1 Score: 49.7 bits (117), Expect = 1.38e-05
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 26
           +AVE DT+FDPSFGDINGNHIGIDV+
Sbjct: 149 VAVEMDTSFDPSFGDINGNHIGIDVN 174

BLAST of MC04g0166 vs. NCBI nr
Match: XP_030544080.1 (L-type lectin-domain containing receptor kinase S.6 [Rhodamnia argentea])

HSP 1 Score: 49.7 bits (117), Expect = 1.38e-05
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 26
           +AVE DT+FDPSFGDINGNHIGIDV+
Sbjct: 149 VAVEMDTSFDPSFGDINGNHIGIDVN 174

BLAST of MC04g0166 vs. NCBI nr
Match: XP_010063880.2 (L-type lectin-domain containing receptor kinase S.6 [Eucalyptus grandis])

HSP 1 Score: 49.7 bits (117), Expect = 1.38e-05
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 26
           +AVE DT+FDPSFGDINGNHIGIDV+
Sbjct: 147 VAVEMDTSFDPSFGDINGNHIGIDVN 172

BLAST of MC04g0166 vs. NCBI nr
Match: KCW71162.1 (hypothetical protein EUGRSUZ_F04258 [Eucalyptus grandis])

HSP 1 Score: 49.7 bits (117), Expect = 1.38e-05
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 26
           +AVE DT+FDPSFGDINGNHIGIDV+
Sbjct: 146 VAVEMDTSFDPSFGDINGNHIGIDVN 171

BLAST of MC04g0166 vs. NCBI nr
Match: XP_006473038.1 (L-type lectin-domain containing receptor kinase S.6 [Citrus sinensis])

HSP 1 Score: 49.3 bits (116), Expect = 1.89e-05
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0

Query: 2   AVEFDTNFDPSFGDINGNHIGIDVS 26
           AVEFDT+FDPS GDINGNHIGID+S
Sbjct: 144 AVEFDTSFDPSLGDINGNHIGIDIS 168

BLAST of MC04g0166 vs. ExPASy TrEMBL
Match: A0A059BYF3 (Protein kinase domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F04258 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 6.68e-06
Identity = 22/26 (84.62%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 26
           +AVE DT+FDPSFGDINGNHIGIDV+
Sbjct: 146 VAVEMDTSFDPSFGDINGNHIGIDVN 171

BLAST of MC04g0166 vs. ExPASy TrEMBL
Match: V4T3E8 (Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10003430mg PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.13e-06
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0

Query: 2   AVEFDTNFDPSFGDINGNHIGIDVS 26
           AVEFDT+FDPS GDINGNHIGID+S
Sbjct: 143 AVEFDTSFDPSLGDINGNHIGIDIS 167

BLAST of MC04g0166 vs. ExPASy TrEMBL
Match: A0A161XXI0 (Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_010091 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.13e-06
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 26
           IAVEFDTN+DPS GDINGNHIGID +
Sbjct: 137 IAVEFDTNYDPSLGDINGNHIGIDAN 162

BLAST of MC04g0166 vs. ExPASy TrEMBL
Match: A0A5B7BAD8 (Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_034577 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.16e-06
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 26
           +AVEFDT FDPS GDINGNHIGIDV+
Sbjct: 152 VAVEFDTTFDPSLGDINGNHIGIDVN 177

BLAST of MC04g0166 vs. ExPASy TrEMBL
Match: A0A067GYD4 (Protein kinase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g047719mg PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 9.16e-06
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0

Query: 2  AVEFDTNFDPSFGDINGNHIGIDVS 26
          AVEFDT+FDPS GDINGNHIGID+S
Sbjct: 65 AVEFDTSFDPSLGDINGNHIGIDIS 89

BLAST of MC04g0166 vs. TAIR 10
Match: AT5G42120.1 (Concanavalin A-like lectin protein kinase family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.7e-06
Identity = 21/26 (80.77%), Postives = 22/26 (84.62%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 27
           IAVEFDT FDP  GDIN NH+GIDVS
Sbjct: 142 IAVEFDTRFDPVHGDINDNHVGIDVS 167

BLAST of MC04g0166 vs. TAIR 10
Match: AT5G55830.1 (Concanavalin A-like lectin protein kinase family protein )

HSP 1 Score: 42.7 bits (99), Expect = 5.1e-05
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDV 26
           +A+EFDT  DP F D NGNHIG+DV
Sbjct: 145 VAIEFDTKLDPHFNDPNGNHIGLDV 169

BLAST of MC04g0166 vs. TAIR 10
Match: AT5G03140.1 (Concanavalin A-like lectin protein kinase family protein )

HSP 1 Score: 39.3 bits (90), Expect = 5.7e-04
Identity = 15/26 (57.69%), Postives = 21/26 (80.77%), Query Frame = 0

Query: 1   IAVEFDTNFDPSFGDINGNHIGIDVS 27
           +AVEFDT  D  F D+NGNH+G+D++
Sbjct: 146 VAVEFDTLMDVQFKDVNGNHVGLDLN 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FHX33.8e-0580.77L-type lectin-domain containing receptor kinase S.6 OS=Arabidopsis thaliana OX=3... [more]
Q9FHG47.2e-0468.00Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thal... [more]
Match NameE-valueIdentityDescription
XP_030444506.11.38e-0584.62L-type lectin-domain containing receptor kinase S.6 [Syzygium oleosum][more]
XP_030544080.11.38e-0584.62L-type lectin-domain containing receptor kinase S.6 [Rhodamnia argentea][more]
XP_010063880.21.38e-0584.62L-type lectin-domain containing receptor kinase S.6 [Eucalyptus grandis][more]
KCW71162.11.38e-0584.62hypothetical protein EUGRSUZ_F04258 [Eucalyptus grandis][more]
XP_006473038.11.89e-0588.00L-type lectin-domain containing receptor kinase S.6 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
A0A059BYF36.68e-0684.62Protein kinase domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRS... [more]
V4T3E89.13e-0688.00Protein kinase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_... [more]
A0A161XXI09.13e-0684.62Protein kinase domain-containing protein OS=Daucus carota subsp. sativus OX=7920... [more]
A0A5B7BAD89.16e-0684.62Protein kinase domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_... [more]
A0A067GYD49.16e-0688.00Protein kinase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 G... [more]
Match NameE-valueIdentityDescription
AT5G42120.12.7e-0680.77Concanavalin A-like lectin protein kinase family protein [more]
AT5G55830.15.1e-0568.00Concanavalin A-like lectin protein kinase family protein [more]
AT5G03140.15.7e-0457.69Concanavalin A-like lectin protein kinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.4220coord: 1..26
e-value: 8.3E-8
score: 34.2
IPR001220Legume lectin domainPFAMPF00139Lectin_legBcoord: 1..25
e-value: 1.8E-6
score: 27.7
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g0166.1MC04g0166.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030246 carbohydrate binding