MC04g0160 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC04g0160
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionWound-responsive family protein
LocationMC04: 1244044 .. 1244313 (-)
RNA-Seq ExpressionMC04g0160
SyntenyMC04g0160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGCCGGAAAAAGTTGGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAAGCCCTGAAACTGAAAGACCAAGGTTTGTGCCGGTGGAATTCTGCGGTGAGGAATTATGGCAACGGCCACCCGGCGGCGAGAACTCTTTCTCAACCCAATAATTTTTCTTCTTCTGTTGGCGGCGATTCGAGTGAAGTTAAAAGGGAAGATCATAAAGCCAAGCAGTCTGAGGAGTCTCTTAGAACCGTCATGTATTTGAGTTGTTGGGGACCTTAT

mRNA sequence

ATGTGTGCCGGAAAAAGTTGGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAAGCCCTGAAACTGAAAGACCAAGGTTTGTGCCGGTGGAATTCTGCGGTGAGGAATTATGGCAACGGCCACCCGGCGGCGAGAACTCTTTCTCAACCCAATAATTTTTCTTCTTCTGTTGGCGGCGATTCGAGTGAAGTTAAAAGGGAAGATCATAAAGCCAAGCAGTCTGAGGAGTCTCTTAGAACCGTCATGTATTTGAGTTGTTGGGGACCTTAT

Coding sequence (CDS)

ATGTGTGCCGGAAAAAGTTGGACGGCGGCGGCGGCGAGTATTGGGGCGGTGGAAGCCCTGAAACTGAAAGACCAAGGTTTGTGCCGGTGGAATTCTGCGGTGAGGAATTATGGCAACGGCCACCCGGCGGCGAGAACTCTTTCTCAACCCAATAATTTTTCTTCTTCTGTTGGCGGCGATTCGAGTGAAGTTAAAAGGGAAGATCATAAAGCCAAGCAGTCTGAGGAGTCTCTTAGAACCGTCATGTATTTGAGTTGTTGGGGACCTTAT

Protein sequence

MCAGKSWTAAAASIGAVEALKLKDQGLCRWNSAVRNYGNGHPAARTLSQPNNFSSSVGGDSSEVKREDHKAKQSEESLRTVMYLSCWGPY
Homology
BLAST of MC04g0160 vs. NCBI nr
Match: KAA0031601.1 (hypothetical protein E6C27_scaffold139G003690 [Cucumis melo var. makuwa] >TYK07053.1 hypothetical protein E5676_scaffold13G003710 [Cucumis melo var. makuwa])

HSP 1 Score: 94.7 bits (234), Expect = 4.69e-23
Identity = 65/96 (67.71%), Postives = 70/96 (72.92%), Query Frame = 0

Query: 1  MCAGKSWT-AAAASIGAVEALKLKDQG-LCRWNS--AVRNYGNGHPAARTLSQPNNFSSS 60
          MCAGKSWT AAAASIGAVEA  LKDQG L R N+   VR   + H    + S  +N S+S
Sbjct: 1  MCAGKSWTTAAAASIGAVEA--LKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSAS 60

Query: 61 VGGDSSEVKRE-DH-KAKQSEESLRTVMYLSCWGPY 90
          V  DSSEVKRE DH K KQSEESLRTVMYLSCWGPY
Sbjct: 61 VMADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 94

BLAST of MC04g0160 vs. NCBI nr
Match: KAG6589196.1 (hypothetical protein SDJN03_17761, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 90.1 bits (222), Expect = 2.45e-21
Identity = 61/97 (62.89%), Postives = 63/97 (64.95%), Query Frame = 0

Query: 1  MCAGKSWT-AAAASIGAVEALKLKDQG-LCRWNSAVRNYGNGHPAARTLSQPNNFSSSVG 60
          MC+GK WT AAAASIGAVEA  LKDQG LCRWNSAVR           LSQPN       
Sbjct: 1  MCSGKYWTTAAAASIGAVEA--LKDQGHLCRWNSAVR----------ALSQPNKLPPPPP 60

Query: 61 GDSSEVKR----EDH-KAKQSEESLRTVMYLSCWGPY 90
            SS   R    EDH K KQSEES+RTVMYLSCWGPY
Sbjct: 61 LSSSSAVRDCREEDHSKPKQSEESIRTVMYLSCWGPY 85

BLAST of MC04g0160 vs. NCBI nr
Match: XP_007149896.1 (hypothetical protein PHAVU_005G108000g [Phaseolus vulgaris] >ESW21890.1 hypothetical protein PHAVU_005G108000g [Phaseolus vulgaris])

HSP 1 Score: 85.9 bits (211), Expect = 1.25e-19
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 1  MC-AGKSWTAAAASIGAVEALKLKDQGLCRWNSAVRNYGN---GHPAARTLSQPNNFSSS 60
          MC AG++W A AAS+G VEA  LKDQGLCRWN+A+R+  +    H   R+LSQ  N SSS
Sbjct: 1  MCSAGRTW-AVAASVGVVEA--LKDQGLCRWNNALRSVQHQVKNH--VRSLSQAKNLSSS 60

Query: 61 VGGDSSEVKREDHKAKQSEESLRTVMYLSCWGP 89
               S + +ED  AKQSEES+RT+MYLSCWGP
Sbjct: 61 SSAMVSSILKEDG-AKQSEESMRTIMYLSCWGP 87

BLAST of MC04g0160 vs. NCBI nr
Match: XP_004487336.1 (uncharacterized protein LOC101509772 [Cicer arietinum])

HSP 1 Score: 85.9 bits (211), Expect = 1.29e-19
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 0

Query: 5  KSWT-AAAASIGAVEALKLKDQGLCRWNSAVRN-YGNGHPAARTLSQPNNFSSSVGGDSS 64
          ++WT + A S+G VEA  LKDQG+CRWNS +R+   +     R+LSQ NNFSSS     +
Sbjct: 6  RAWTWSVATSVGVVEA--LKDQGICRWNSVIRSAQQHAKHNIRSLSQANNFSSS--SSVA 65

Query: 65 EVKREDHKAKQSEESLRTVMYLSCWGP 89
             R++ KAKQSEESLRTVMYLSCWGP
Sbjct: 66 TKLRDEKKAKQSEESLRTVMYLSCWGP 88

BLAST of MC04g0160 vs. NCBI nr
Match: XP_012070670.1 (uncharacterized protein LOC105632826 [Jatropha curcas] >KDP38956.1 hypothetical protein JCGZ_00713 [Jatropha curcas])

HSP 1 Score: 85.5 bits (210), Expect = 1.93e-19
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0

Query: 4  GKSWTAAAASIGAVEALKLKDQGLCRWNSAVRN---YGNGHPAARTLSQPNNFSSSVGGD 63
          G++W AAA SIG VEA  LKDQGLCRWNSA+R+   +   +  +   +QP N  S++   
Sbjct: 5  GRAWVAAA-SIGVVEA--LKDQGLCRWNSALRSIQQHAKNNVKSYYSNQPKNMFSALSSS 64

Query: 64 SSEVKREDHKAKQSEESLRTVMYLSCWGP 89
          +   +  D K KQSEESLRTVMYLSCWGP
Sbjct: 65 ALSKRLRDEKLKQSEESLRTVMYLSCWGP 90

BLAST of MC04g0160 vs. ExPASy TrEMBL
Match: A0A5D3C541 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003710 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.27e-23
Identity = 65/96 (67.71%), Postives = 70/96 (72.92%), Query Frame = 0

Query: 1  MCAGKSWT-AAAASIGAVEALKLKDQG-LCRWNS--AVRNYGNGHPAARTLSQPNNFSSS 60
          MCAGKSWT AAAASIGAVEA  LKDQG L R N+   VR   + H    + S  +N S+S
Sbjct: 1  MCAGKSWTTAAAASIGAVEA--LKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSNSSAS 60

Query: 61 VGGDSSEVKRE-DH-KAKQSEESLRTVMYLSCWGPY 90
          V  DSSEVKRE DH K KQSEESLRTVMYLSCWGPY
Sbjct: 61 VMADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 94

BLAST of MC04g0160 vs. ExPASy TrEMBL
Match: A0A0A0K1Q6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046680 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.33e-21
Identity = 65/97 (67.01%), Postives = 70/97 (72.16%), Query Frame = 0

Query: 1  MCAGKSWT-AAAASIGAVEALKLKDQG-LCRWNS--AVRNYGNGHPAARTLSQPNNFSS- 60
          MCAGKSWT AAAASIGAVEA  LKDQG L R N+   VR   + H    + S  ++ SS 
Sbjct: 1  MCAGKSWTTAAAASIGAVEA--LKDQGHLWRLNNKYGVRAISSHHNKLSSSSSSSSKSSA 60

Query: 61 SVGGDSSEVKRE-DH-KAKQSEESLRTVMYLSCWGPY 90
          SV  DSSEVKRE DH K KQSEESLRTVMYLSCWGPY
Sbjct: 61 SVIADSSEVKRELDHSKPKQSEESLRTVMYLSCWGPY 95

BLAST of MC04g0160 vs. ExPASy TrEMBL
Match: V7BXW5 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G108000g PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.05e-20
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 0

Query: 1  MC-AGKSWTAAAASIGAVEALKLKDQGLCRWNSAVRNYGN---GHPAARTLSQPNNFSSS 60
          MC AG++W A AAS+G VEA  LKDQGLCRWN+A+R+  +    H   R+LSQ  N SSS
Sbjct: 1  MCSAGRTW-AVAASVGVVEA--LKDQGLCRWNNALRSVQHQVKNH--VRSLSQAKNLSSS 60

Query: 61 VGGDSSEVKREDHKAKQSEESLRTVMYLSCWGP 89
               S + +ED  AKQSEES+RT+MYLSCWGP
Sbjct: 61 SSAMVSSILKEDG-AKQSEESMRTIMYLSCWGP 87

BLAST of MC04g0160 vs. ExPASy TrEMBL
Match: A0A1S2XCT4 (uncharacterized protein LOC101509772 OS=Cicer arietinum OX=3827 GN=LOC101509772 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.22e-20
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 0

Query: 5  KSWT-AAAASIGAVEALKLKDQGLCRWNSAVRN-YGNGHPAARTLSQPNNFSSSVGGDSS 64
          ++WT + A S+G VEA  LKDQG+CRWNS +R+   +     R+LSQ NNFSSS     +
Sbjct: 6  RAWTWSVATSVGVVEA--LKDQGICRWNSVIRSAQQHAKHNIRSLSQANNFSSS--SSVA 65

Query: 65 EVKREDHKAKQSEESLRTVMYLSCWGP 89
             R++ KAKQSEESLRTVMYLSCWGP
Sbjct: 66 TKLRDEKKAKQSEESLRTVMYLSCWGP 88

BLAST of MC04g0160 vs. ExPASy TrEMBL
Match: A0A067KRV6 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00713 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 9.32e-20
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0

Query: 4  GKSWTAAAASIGAVEALKLKDQGLCRWNSAVRN---YGNGHPAARTLSQPNNFSSSVGGD 63
          G++W AAA SIG VEA  LKDQGLCRWNSA+R+   +   +  +   +QP N  S++   
Sbjct: 5  GRAWVAAA-SIGVVEA--LKDQGLCRWNSALRSIQQHAKNNVKSYYSNQPKNMFSALSSS 64

Query: 64 SSEVKREDHKAKQSEESLRTVMYLSCWGP 89
          +   +  D K KQSEESLRTVMYLSCWGP
Sbjct: 65 ALSKRLRDEKLKQSEESLRTVMYLSCWGP 90

BLAST of MC04g0160 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-14
Identity = 50/88 (56.82%), Postives = 58/88 (65.91%), Query Frame = 0

Query: 5  KSWTAAAASIGAVEALKLKDQ-GLCRWNSAVRNYGNGH--PAARTLSQPNNFSSSVGGDS 64
          K+WT  A SIGAVEA  LKDQ GLCRWN  +R+  N H     R++SQ   FSSS    +
Sbjct: 6  KAWT-VAVSIGAVEA--LKDQLGLCRWNYILRSV-NQHLRNNVRSVSQGKRFSSSSVSAA 65

Query: 65 SEVKREDHKAKQSEESLRTVMYLSCWGP 90
               E  KAK++EESLRTVMYLSCWGP
Sbjct: 66 VTSSGESEKAKKAEESLRTVMYLSCWGP 89

BLAST of MC04g0160 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 65.9 bits (159), Expect = 2.0e-11
Identity = 47/89 (52.81%), Postives = 56/89 (62.92%), Query Frame = 0

Query: 3  AGKSWTAAAASIGAVEALKLKDQ-GLCRWNSAVRNYGNG-HPAARTLSQPNNFSSSVGGD 62
          A K+W   AASIGAVEA  LKDQ G+CRWN  +R+         R++SQ    SSS    
Sbjct: 4  ASKTW-MVAASIGAVEA--LKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSS---- 63

Query: 63 SSEVKREDHKAKQSEESLRTVMYLSCWGP 90
          S +     +K KQ+EESLRTVMYLSCWGP
Sbjct: 64 SIDY---TNKTKQAEESLRTVMYLSCWGP 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0031601.14.69e-2367.71hypothetical protein E6C27_scaffold139G003690 [Cucumis melo var. makuwa] >TYK070... [more]
KAG6589196.12.45e-2162.89hypothetical protein SDJN03_17761, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_007149896.11.25e-1958.06hypothetical protein PHAVU_005G108000g [Phaseolus vulgaris] >ESW21890.1 hypothet... [more]
XP_004487336.11.29e-1957.47uncharacterized protein LOC101509772 [Cicer arietinum][more]
XP_012070670.11.93e-1953.93uncharacterized protein LOC105632826 [Jatropha curcas] >KDP38956.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
A0A5D3C5412.27e-2367.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K1Q66.33e-2167.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046680 PE=4 SV=1[more]
V7BXW56.05e-2058.06Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G108000g PE=4 ... [more]
A0A1S2XCT46.22e-2057.47uncharacterized protein LOC101509772 OS=Cicer arietinum OX=3827 GN=LOC101509772 ... [more]
A0A067KRV69.32e-2053.93Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00713 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G10270.11.4e-1456.82Wound-responsive family protein [more]
AT4G10265.12.0e-1152.81Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 11..89
e-value: 1.2E-24
score: 87.1
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 1..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC04g0160.1MC04g0160.1mRNA