MC04g0141 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC04g0141
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Fork head domain transcription factor slp2 like
Location	MC04: 1073978 .. 1075004 (+)
RNA-Seq Expression	MC04g0141
Synteny	MC04g0141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGCTTTCCCATTGCCATATAAATATGGCCTATGGGATTCGTTTGGTGCAATTTCCGCTCCACAGAAAGTCATTTTATTTTCCAGATTCCCGGAAAAAACGCCGCCCCAAATGAAGAAAACAGGGCTCTTCGCCGCCGCCGCCTCCGCCGCTGCTCTGTCTGCTCCGCCGTCCTCCGCCGGCTTCCCCAAGGCCAAAACTCAGCAGCAGGTACTTAATTTAATTCAATTAAAGATATGTTGGTTATCTGATGTGGAGAAGTGAATTTCCGATGTGGGAATTTCAGGAAAAGATTAGAGATGAGGAAATTAGTTCGTCGCGAAGATCTGATAATAAATTTGCTCCCAGGTTCGATGGGTTGCGATTCATTGAAACTTTGGTCACTGCTCATAGATGATGATAAGCTTTGGAGTTGGCGATTATATCCATCTTCTCTCCAAAAGTCCATATCTTTTTTTTTTTTTTTTTAATTTCTTTTTGTCTCTGTCTAATTATCCTCATAAGAAAAAAGAAAGAAAAAGAAAAAAACATGAATCACTGTGAGGGGAAGAGCCCAATTTGGTGTATTTTCCAATTTCATTTCCAAGTTGGTGTGGTGGGTTTCGTTTTTACTCCTTTTTTTCTTTAGCCTCTCCCTTACCTTTCAAATGTAATGTATTTTATTTATATTATATGGTCATTTATGGATATTTATGCAATATGACCAAAAATCATGATGTCACTATATACAAGGACAGGTCCACTTTGGTTTTTCAACTCGATCGGTTTATTAAGTGGATATTTTGATTGATTTTTTGATGTAATTCAACACCTCTCGAAAAGGGGAAATTGGGAAAGTCGTATATATTGTATATGGTGAGTAGAAAGTGGTTTCCAAAAAGTTTATAATTGCATCGTGGTGTGGTATCTTTTTCTTTGGGTTTCCACAAAAAAAGGCTTAGGCAAAAAGTAGCACAAAACTCCAGTCTTTTCCCGACTTTAAAATTGTATCTAATAGATCACGAAAGTTGTCGTATCGAAGGTAAAG

mRNA sequence

CTAGCTTTCCCATTGCCATATAAATATGGCCTATGGGATTCGTTTGGTGCAATTTCCGCTCCACAGAAAGTCATTTTATTTTCCAGATTCCCGGAAAAAACGCCGCCCCAAATGAAGAAAACAGGGCTCTTCGCCGCCGCCGCCTCCGCCGCTGCTCTGTCTGCTCCGCCGTCCTCCGCCGGCTTCCCCAAGGCCAAAACTCAGCAGCAGGAAAAGATTAGAGATGAGGAAATTAGTTCGTCGCGAAGATCTGATAATAAATTTGCTCCCAGGTTCGATGGGTTGCGATTCATTGAAACTTTGGTCACTGCTCATAGATGATGATAAGCTTTGGAGTTGGCGATTATATCCATCTTCTCTCCAAAAGTCCATATCTTTTTTTTTTTTTTTTTAATTTCTTTTTGTCTCTGTCTAATTATCCTCATAAGAAAAAAGAAAGAAAAAGAAAAAAACATGAATCACTGTGAGGGGAAGAGCCCAATTTGGTGTATTTTCCAATTTCATTTCCAAGTTGGTGTGGTGGGTTTCGTTTTTACTCCTTTTTTTCTTTAGCCTCTCCCTTACCTTTCAAATGTAATGTATTTTATTTATATTATATGGTCATTTATGGATATTTATGCAATATGACCAAAAATCATGATGTCACTATATACAAGGACAGGTCCACTTTGGTTTTTCAACTCGATCGGTTTATTAAGTGGATATTTTGATTGATTTTTTGATGTAATTCAACACCTCTCGAAAAGGGGAAATTGGGAAAGTCGTATATATTGTATATGGTGAGTAGAAAGTGGTTTCCAAAAAGTTTATAATTGCATCGTGGTGTGGTATCTTTTTCTTTGGGTTTCCACAAAAAAAGGCTTAGGCAAAAAGTAGCACAAAACTCCAGTCTTTTCCCGACTTTAAAATTGTATCTAATAGATCACGAAAGTTGTCGTATCGAAGGTAAAG

Coding sequence (CDS)

CTAGCTTTCCCATTGCCATATAAATATGGCCTATGGGATTCGTTTGGTGCAATTTCCGCTCCACAGAAAGTCATTTTATTTTCCAGATTCCCGGAAAAAACGCCGCCCCAAATGAAGAAAACAGGGCTCTTCGCCGCCGCCGCCTCCGCCGCTGCTCTGTCTGCTCCGCCGTCCTCCGCCGGCTTCCCCAAGGCCAAAACTCAGCAGCAGGAAAAGATTAGAGATGAGGAAATTAGTTCGTCGCGAAGATCTGATAATAAATTTGCTCCCAGGTTCGATGGGTTGCGATTCATTGAAACTTTGGTCACTGCTCATAGATGA

Protein sequence

LAFPLPYKYGLWDSFGAISAPQKVILFSRFPEKTPPQMKKTGLFAAAASAAALSAPPSSAGFPKAKTQQQEKIRDEEISSSRRSDNKFAPRFDGLRFIETLVTAHR

Homology

[Close]

BLAST of MC04g0141 vs. NCBI nr
Match: KAG7022918.1 (hypothetical protein SDJN02_16654, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 79.7 bits (195), Expect = 4.79e-17
Identity = 53/79 (67.09%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 38  MKKTGLFAAAASAAA----LSAPPSSAGFPKAKTQQQEKI-RDEEISSSRRSD-----NK 97
           MK  GLFA AA+AAA    LSAPPSSAG  K     QEK+ RDEEIS SRRS      + 
Sbjct: 1   MKIAGLFAVAAAAAASTIVLSAPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDH 60

Query: 98  FAPRFDGLRFIETLVTAHR 106
           FAPRFDGLRFIETLVTAHR
Sbjct: 61  FAPRFDGLRFIETLVTAHR 79

[Close]

BLAST of MC04g0141 vs. NCBI nr
Match: KAG6589218.1 (hypothetical protein SDJN03_17783, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.3 bits (194), Expect = 6.62e-17
Identity = 52/78 (66.67%), Postives = 57/78 (73.08%), Query Frame = 0


Query: 38  MKKTGLFAAAASAAA---LSAPPSSAGFPKAKTQQQEKI-RDEEISSSRRSD-----NKF 97
           MK  GLFAAAA++A+   LSAPPSSAG  K     QEK+ RDEEIS SRRS      + F
Sbjct: 1   MKIAGLFAAAAASASTIVLSAPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHF 60

Query: 98  APRFDGLRFIETLVTAHR 106
           APRFDGLRFIETLVTAHR
Sbjct: 61  APRFDGLRFIETLVTAHR 78

[Close]

BLAST of MC04g0141 vs. NCBI nr
Match: XP_038888462.1 (uncharacterized protein LOC120078298 [Benincasa hispida])

HSP 1 Score: 78.6 bits (192), Expect = 1.37e-16
Identity = 53/79 (67.09%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 38  MKKTGLFAA---AASAAALSAPPSSAGFPKAKTQQQEKI-RDEEISS-SRRSD-----NK 97
           MKKTGLFAA   AASA ALSAPPSSAG  K     QE++ RD+EI++ SRRS       +
Sbjct: 1   MKKTGLFAASVAAASATALSAPPSSAGILKTTFSHQEQVTRDQEITTPSRRSPPSTAAEQ 60

Query: 98  FAPRFDGLRFIETLVTAHR 106
           FAPRFDGLRFIETLVTAHR
Sbjct: 61  FAPRFDGLRFIETLVTAHR 79

[Close]

BLAST of MC04g0141 vs. NCBI nr
Match: XP_022969313.1 (uncharacterized protein LOC111468357 [Cucurbita maxima])

HSP 1 Score: 77.8 bits (190), Expect = 2.90e-16
Identity = 54/79 (68.35%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 38  MKKTGLFAA---AASAAALSAPPSSAGFPKAKTQQQEK--IRDEEISSSRRSD-----NK 97
           MKKTGLFAA   AASA ALSAP SSAG  K     QEK  IRDEE S SR S      ++
Sbjct: 3   MKKTGLFAASVAAASATALSAPSSSAGVLKTTFSHQEKVIIRDEESSPSRISPPSTAADQ 62

Query: 98  FAPRFDGLRFIETLVTAHR 106
           FAPRFDGLRFIETLVTAHR
Sbjct: 63  FAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of MC04g0141 vs. NCBI nr
Match: XP_022952670.1 (uncharacterized protein LOC111455296 [Cucurbita moschata] >KAG6572361.1 hypothetical protein SDJN03_29089, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011972.1 hypothetical protein SDJN02_26880 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 77.8 bits (190), Expect = 2.90e-16
Identity = 53/79 (67.09%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 38  MKKTGLFAA---AASAAALSAPPSSAGFPKAKTQQQEKI--RDEEISSSRRSD-----NK 97
           MKKTGLFAA   AASA ALSAP SSAG  K     QEK+  RDEE S SR S      ++
Sbjct: 3   MKKTGLFAASVAAASATALSAPSSSAGVLKTTFSHQEKVISRDEETSPSRISPPSTAPDQ 62

Query: 98  FAPRFDGLRFIETLVTAHR 106
           FAPRFDGLRFIETLVTAHR
Sbjct: 63  FAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of MC04g0141 vs. ExPASy TrEMBL
Match: A0A6J1I0M0 (uncharacterized protein LOC111468357 OS=Cucurbita maxima OX=3661 GN=LOC111468357 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.40e-16
Identity = 54/79 (68.35%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 38  MKKTGLFAA---AASAAALSAPPSSAGFPKAKTQQQEK--IRDEEISSSRRSD-----NK 97
           MKKTGLFAA   AASA ALSAP SSAG  K     QEK  IRDEE S SR S      ++
Sbjct: 3   MKKTGLFAASVAAASATALSAPSSSAGVLKTTFSHQEKVIIRDEESSPSRISPPSTAADQ 62

Query: 98  FAPRFDGLRFIETLVTAHR 106
           FAPRFDGLRFIETLVTAHR
Sbjct: 63  FAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of MC04g0141 vs. ExPASy TrEMBL
Match: A0A6J1GMF4 (uncharacterized protein LOC111455296 OS=Cucurbita moschata OX=3662 GN=LOC111455296 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.40e-16
Identity = 53/79 (67.09%), Postives = 56/79 (70.89%), Query Frame = 0


Query: 38  MKKTGLFAA---AASAAALSAPPSSAGFPKAKTQQQEKI--RDEEISSSRRSD-----NK 97
           MKKTGLFAA   AASA ALSAP SSAG  K     QEK+  RDEE S SR S      ++
Sbjct: 3   MKKTGLFAASVAAASATALSAPSSSAGVLKTTFSHQEKVISRDEETSPSRISPPSTAPDQ 62

Query: 98  FAPRFDGLRFIETLVTAHR 106
           FAPRFDGLRFIETLVTAHR
Sbjct: 63  FAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of MC04g0141 vs. ExPASy TrEMBL
Match: A0A0A0K2C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047970 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.64e-16
Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 38  MKKTGLFAA---AASAAALSAPPSSAGFPKAKTQQQEKI-RDEEISS-SRRSD-----NK 97
           MKKTGLFAA   AASA ALSAPP+S G  K    +QEK+ RDEE ++ +RRS      ++
Sbjct: 1   MKKTGLFAASVAAASATALSAPPASPGLLKTNFSRQEKVTRDEESTTPARRSPPSTAADQ 60

Query: 98  FAPRFDGLRFIETLVTAHR 106
           FAPRFDGLRFIETLVTAHR
Sbjct: 61  FAPRFDGLRFIETLVTAHR 79

[Close]

BLAST of MC04g0141 vs. ExPASy TrEMBL
Match: A0A5D3C7A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003450 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.84e-16
Identity = 52/80 (65.00%), Postives = 58/80 (72.50%), Query Frame = 0


Query: 38  MKKTGLFAA---AASAAALSAPPSSAGFPKAKTQQQEKI--RDEEISS-SRRS-----DN 97
           MKKTGLFAA   AASA ALSAPPSS    K     QEK+  RDEEI++ +RRS      +
Sbjct: 1   MKKTGLFAASVAAASATALSAPPSSPSTLKTNFSHQEKVIARDEEITTPTRRSPPSTASD 60

Query: 98  KFAPRFDGLRFIETLVTAHR 106
           +FAPRFDGLRFIETLVTAHR
Sbjct: 61  QFAPRFDGLRFIETLVTAHR 80

[Close]

BLAST of MC04g0141 vs. ExPASy TrEMBL
Match: A0A2N9F4Y7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9736 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.48e-12
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0


Query: 38  MKKTGLFAAAASAAALSAPPSSAGFPKAKTQQQEKIRDEEISSSRR--SDNKFAPRFDGL 97
           MKK GLFAA+ +AA+ S   SS       T QQE I+++E SS +R  S +KFAPRFDGL
Sbjct: 1   MKKPGLFAASVAAASASISVSSPSTI-CNTTQQEDIKNKEQSSPQRPSSTDKFAPRFDGL 60

Query: 98  RFIETLVTAHR 106
           RFIETLVTAHR
Sbjct: 61  RFIETLVTAHR 70

[Close]

BLAST of MC04g0141 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09
Identity = 43/80 (53.75%), Postives = 51/80 (63.75%), Query Frame = 0


Query: 38  MKKTGLFAA----AASAAALSAPPS----SAGFPKAKTQQQ---EKIRDEEISSSRRSDN 97
           MKKTG+ AA    AASA A+SA  +    S   P++   +Q   EK R ++ SS    D 
Sbjct: 1   MKKTGIIAASISVAASATAISAGSTNTSVSFSSPESNLSRQEAKEKQRKKKGSSEDGGDE 60

Query: 98  KFAPRFDGLRFIETLVTAHR 107
           KFAPRFDGLRFIETLVTAHR
Sbjct: 61  KFAPRFDGLRFIETLVTAHR 80

The following BLAST results are available for this feature:

BLAST of MC04g0141 vs.


Match Name	E-value	Identity	Description

BLAST of MC04g0141 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7022918.1	4.79e-17	67.09	hypothetical protein SDJN02_16654, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6589218.1	6.62e-17	66.67	hypothetical protein SDJN03_17783, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038888462.1	1.37e-16	67.09	uncharacterized protein LOC120078298 [Benincasa hispida]	[more]
XP_022969313.1	2.90e-16	68.35	uncharacterized protein LOC111468357 [Cucurbita maxima]	[more]
XP_022952670.1	2.90e-16	67.09	uncharacterized protein LOC111455296 [Cucurbita moschata] >KAG6572361.1 hypothet...	[more]

BLAST of MC04g0141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0M0	1.40e-16	68.35	uncharacterized protein LOC111468357 OS=Cucurbita maxima OX=3661 GN=LOC111468357...	[more]
A0A6J1GMF4	1.40e-16	67.09	uncharacterized protein LOC111455296 OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A0A0K2C1	7.64e-16	64.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047970 PE=4 SV=1	[more]
A0A5D3C7A0	7.84e-16	65.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2N9F4Y7	7.48e-12	60.56	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9736 PE=4 SV=1	[more]

BLAST of MC04g0141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28290.1	1.6e-09	53.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..85
None	No IPR available	PANTHER	PTHR34683	EXPRESSED PROTEIN-RELATED	coord: 19..106
None	No IPR available	PANTHER	PTHR34683:SF4	SUBFAMILY NOT NAMED	coord: 19..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC04g0141.1	MC04g0141.1	mRNA