MC03g_new0336 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0336
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ethylene-responsive transcription factor 12-like
Location	MC03: 14526785 .. 14527246 (-)
RNA-Seq Expression	MC03g_new0336
Synteny	MC03g_new0336

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGTCGAGTGGTCGTGAGGGGCACTACAGAGGCGTGAGGAAGAGGCCGTGGGGGCGCTACGCCGCTGAGATACGCGACCCTTGGAAGAAGACCAGAGTTTGGTTGGGTACTTTCGACACCCCAGAAGAGGCCGCCCTTGCTTACGACGGCGCCGCCAGGTCCCTCCGCGGCTCCAAGGCTAAGACCAACTTCCCTCCGCCACTCCCTTCCGCTGCCGCCGTCCTCGACCTCAACGTCTCCTCCTCCGCCGCCGGACCCGCCACCTGGCCCTCCACTCGGCTCCTGCTCGGCGATTTCCTCCGCAACGACCTGTGCTGCCCCGTCAATGTGGGCCCCTCTCCCCCGGCTGCTCCTCCCATGGTGCTCGAAGCCTCCGCCGCTACGACGTCGTTTCTTGGGCACGTGCGGCGCGGCCTCCTCATTGATCTCAACGAGCCTCCCCCGGTGTGGCTGTGA

mRNA sequence

ATGGCGTCGTCGAGTGGTCGTGAGGGGCACTACAGAGGCGTGAGGAAGAGGCCGTGGGGGCGCTACGCCGCTGAGATACGCGACCCTTGGAAGAAGACCAGAGTTTGGTTGGGTACTTTCGACACCCCAGAAGAGGCCGCCCTTGCTTACGACGGCGCCGCCAGGTCCCTCCGCGGCTCCAAGGCTAAGACCAACTTCCCTCCGCCACTCCCTTCCGCTGCCGCCGTCCTCGACCTCAACGTCTCCTCCTCCGCCGCCGGACCCGCCACCTGGCCCTCCACTCGGCTCCTGCTCGGCGATTTCCTCCGCAACGACCTGTGCTGCCCCGTCAATGTGGGCCCCTCTCCCCCGGCTGCTCCTCCCATGGTGCTCGAAGCCTCCGCCGCTACGACGTCGTTTCTTGGGCACGTGCGGCGCGGCCTCCTCATTGATCTCAACGAGCCTCCCCCGGTGTGGCTGTGA

Coding sequence (CDS)

ATGGCGTCGTCGAGTGGTCGTGAGGGGCACTACAGAGGCGTGAGGAAGAGGCCGTGGGGGCGCTACGCCGCTGAGATACGCGACCCTTGGAAGAAGACCAGAGTTTGGTTGGGTACTTTCGACACCCCAGAAGAGGCCGCCCTTGCTTACGACGGCGCCGCCAGGTCCCTCCGCGGCTCCAAGGCTAAGACCAACTTCCCTCCGCCACTCCCTTCCGCTGCCGCCGTCCTCGACCTCAACGTCTCCTCCTCCGCCGCCGGACCCGCCACCTGGCCCTCCACTCGGCTCCTGCTCGGCGATTTCCTCCGCAACGACCTGTGCTGCCCCGTCAATGTGGGCCCCTCTCCCCCGGCTGCTCCTCCCATGGTGCTCGAAGCCTCCGCCGCTACGACGTCGTTTCTTGGGCACGTGCGGCGCGGCCTCCTCATTGATCTCAACGAGCCTCCCCCGGTGTGGCTGTGA

Protein sequence

MASSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFPPPLPSAAAVLDLNVSSSAAGPATWPSTRLLLGDFLRNDLCCPVNVGPSPPAAPPMVLEASAATTSFLGHVRRGLLIDLNEPPPVWL

Homology

[Close]

BLAST of MC03g_new0336 vs. ExPASy Swiss-Prot
Match: Q94ID6 (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=ERF12 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-35
Identity = 99/194 (51.03%), Postives = 109/194 (56.19%), Query Frame = 0


Query: 1   MASSS-GREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAS++  RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPL----------PSAAAVLDLNVSSS------AAGPATWPST-------RL 120
            KAKTNFP PL          PSAA     N          AA P   PS+       R+
Sbjct: 61  IKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQHHRI 120

Query: 121 LLGDFLRNDLC-------CPVNVGPSPPAAP----------PMVLEASAATTSFLGHVRR 154
            L   + ND          P+    SP  A           PM+  + +  T     VRR
Sbjct: 121 FLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGYQVVGFPMMNSSPSPVT-----VRR 180

[Close]

BLAST of MC03g_new0336 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.4e-24
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 7  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 66
          +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 67 PPP 70
          P P
Sbjct: 89 PLP 91

[Close]

BLAST of MC03g_new0336 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.7e-24
Identity = 55/79 (69.62%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 7   REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 66
           +E HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 67  PPPLPSAAAVLDLNVSSSA 86
           P P  + +      V SS+
Sbjct: 83  PSPTENQSPSHSSTVESSS 101

[Close]

BLAST of MC03g_new0336 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-23
Identity = 51/67 (76.12%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 3  SSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 62
          S   +E  +RGVRKRPWGR+AAEIRDPWKKTRVWLGTFD+ E+AA AYD AAR+LRG KA
Sbjct: 20 SGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKA 79

Query: 63 KTNFPPP 70
          KTNFP P
Sbjct: 80 KTNFPLP 86

[Close]

BLAST of MC03g_new0336 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.7e-23
Identity = 54/79 (68.35%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 7   REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 66
           +E HYRGVRKRPWGRYAAEIRDP KK+RVWLGTFDT EEAA AYD AAR  RG KAKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 67  PPPLPSAAAVLDLNVSSSA 86
           P P  + +      + SS+
Sbjct: 83  PLPSENQSTSHSSTMESSS 101

[Close]

BLAST of MC03g_new0336 vs. NCBI nr
Match: XP_038895107.1 (ethylene-responsive transcription factor 12 [Benincasa hispida])

HSP 1 Score: 210 bits (534), Expect = 8.50e-67
Identity = 113/162 (69.75%), Postives = 122/162 (75.31%), Query Frame = 0


Query: 1   MASSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60
           MAS+  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS
Sbjct: 1   MAST--REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60

Query: 61  KAKTNFPPPLPSAAAVLDLNVSS-----SAAGPATWPSTRLLLGDFLR----NDLCCPVN 120
           KAKTNFPPP+P  +  LDLNVSS     ++A  A   S R LLGDFLR    ND+C  +N
Sbjct: 61  KAKTNFPPPVPGLS--LDLNVSSPWPTVTSAAAAPSSSARFLLGDFLRHGARNDMCN-LN 120

Query: 121 VGPSPPAAPPMVLEASAATTSFLGHVRRGLLIDLNEPPPVWL 153
              SP          + ATTSF+GHVRRGL  DLNEPPPVWL
Sbjct: 121 AEASPVLLDSSAASTATATTSFIGHVRRGLPFDLNEPPPVWL 157

[Close]

BLAST of MC03g_new0336 vs. NCBI nr
Match: XP_004146616.1 (ethylene-responsive transcription factor 12 [Cucumis sativus])

HSP 1 Score: 208 bits (530), Expect = 4.35e-66
Identity = 114/169 (67.46%), Postives = 122/169 (72.19%), Query Frame = 0


Query: 1   MASSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60
           MAS+  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS
Sbjct: 1   MAST--REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60

Query: 61  KAKTNFPPPLPSAAAVLDLNVSSSAAGPATWP------------STRLLLGDFLR----N 120
           KAKTNFPPPLP  +  LDLNVS     P + P            STR LLGDFLR    N
Sbjct: 61  KAKTNFPPPLPGLS--LDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRN 120

Query: 121 DLCCPVNVGPSPPAAPPMVLEASAATTSFLGHVRRGLLIDLNEPPPVWL 153
           D+C  +NV  SP         +S A+ SF+GHVRRGL  DLNEPPPVWL
Sbjct: 121 DICN-LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]

BLAST of MC03g_new0336 vs. NCBI nr
Match: XP_022954651.1 (ethylene-responsive transcription factor 12-like [Cucurbita moschata])

HSP 1 Score: 205 bits (521), Expect = 7.59e-65
Identity = 105/154 (68.18%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 4   SSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 63
           +S R+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK
Sbjct: 2   ASARDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 61

Query: 64  TNFPPPLPSAAAVLDLNVSSSAAGPATWPSTRLLLGDFLRNDL----CCPVNVGPSPPAA 123
           TNFP PL +A    DLNVS   A P++  S RLLLGDFLR+       C V+V  SP   
Sbjct: 62  TNFPLPLSAAGLCFDLNVSRPTASPSSSSSARLLLGDFLRHGAPRHEMCNVDVEVSPVLV 121

Query: 124 PPMVLEASAATTSFLGHVRRGLLIDLNEPPPVWL 153
                   + T SF+GHVRR L  DLNEPPPVWL
Sbjct: 122 DSSAPTPPSNTASFIGHVRRVLPFDLNEPPPVWL 155

[Close]

BLAST of MC03g_new0336 vs. NCBI nr
Match: XP_008442801.1 (PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo] >KAA0057008.1 ethylene-responsive transcription factor 12 [Cucumis melo var. makuwa] >TYK26435.1 ethylene-responsive transcription factor 12 [Cucumis melo var. makuwa])

HSP 1 Score: 205 bits (521), Expect = 9.85e-65
Identity = 115/172 (66.86%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MASSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60
           MAS+  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS
Sbjct: 1   MAST--REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60

Query: 61  KAKTNFPPPLPSAAAVLDLNVSSSAAGPATWP----------STRLLLGDFLR----NDL 120
           KAKTNFPPPLP  +  LDLNVS     P + P          S R LLGDFLR    ND+
Sbjct: 61  KAKTNFPPPLPGLS--LDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDM 120

Query: 121 CCPVNVGPSPPAAPPMVLEASA-----ATTSFLGHVRRGLLIDLNEPPPVWL 153
           C  +NV     AA P++++ SA     A+ SF+GHVRRGL  DLNEPPPVWL
Sbjct: 121 CN-LNVD----AASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of MC03g_new0336 vs. NCBI nr
Match: KAG6573284.1 (Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200 bits (509), Expect = 5.61e-63
Identity = 105/157 (66.88%), Postives = 115/157 (73.25%), Query Frame = 0


Query: 4   SSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 63
           +S R+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK
Sbjct: 2   ASARDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 61

Query: 64  TNFPPPLPSAAAVLDLNVSSSAAGPATWPST---RLLLGDFLRNDL----CCPVNVGPSP 123
           TNFP PL +A    DLNVS   A P++  S+   RLLLGDFLR+       C V+V  SP
Sbjct: 62  TNFPLPLSAAGLCFDLNVSRPTASPSSTSSSSSARLLLGDFLRHGAPRHDMCNVDVEVSP 121

Query: 124 PAAPPMVLEASAATTSFLGHVRRGLLIDLNEPPPVWL 153
                      + T SF+GHVRR L  DLNEPPPVWL
Sbjct: 122 VLVDSSAPTPPSNTASFIGHVRRVLPFDLNEPPPVWL 158

[Close]

BLAST of MC03g_new0336 vs. ExPASy TrEMBL
Match: A0A0A0LSE4 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=4 SV=1)

HSP 1 Score: 208 bits (530), Expect = 2.10e-66
Identity = 114/169 (67.46%), Postives = 122/169 (72.19%), Query Frame = 0


Query: 1   MASSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60
           MAS+  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS
Sbjct: 1   MAST--REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60

Query: 61  KAKTNFPPPLPSAAAVLDLNVSSSAAGPATWP------------STRLLLGDFLR----N 120
           KAKTNFPPPLP  +  LDLNVS     P + P            STR LLGDFLR    N
Sbjct: 61  KAKTNFPPPLPGLS--LDLNVSGPWPTPTSAPPCSSSSSSPSPSSTRFLLGDFLRHGVRN 120

Query: 121 DLCCPVNVGPSPPAAPPMVLEASAATTSFLGHVRRGLLIDLNEPPPVWL 153
           D+C  +NV  SP         +S A+ SF+GHVRRGL  DLNEPPPVWL
Sbjct: 121 DICN-LNVDASPVLVDSSASGSSTASASFIGHVRRGLPFDLNEPPPVWL 164

[Close]

BLAST of MC03g_new0336 vs. ExPASy TrEMBL
Match: A0A6J1GRG6 (ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 GN=LOC111456849 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 3.67e-65
Identity = 105/154 (68.18%), Postives = 114/154 (74.03%), Query Frame = 0


Query: 4   SSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 63
           +S R+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK
Sbjct: 2   ASARDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 61

Query: 64  TNFPPPLPSAAAVLDLNVSSSAAGPATWPSTRLLLGDFLRNDL----CCPVNVGPSPPAA 123
           TNFP PL +A    DLNVS   A P++  S RLLLGDFLR+       C V+V  SP   
Sbjct: 62  TNFPLPLSAAGLCFDLNVSRPTASPSSSSSARLLLGDFLRHGAPRHEMCNVDVEVSPVLV 121

Query: 124 PPMVLEASAATTSFLGHVRRGLLIDLNEPPPVWL 153
                   + T SF+GHVRR L  DLNEPPPVWL
Sbjct: 122 DSSAPTPPSNTASFIGHVRRVLPFDLNEPPPVWL 155

[Close]

BLAST of MC03g_new0336 vs. ExPASy TrEMBL
Match: A0A5D3DSV2 (Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00990 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 4.77e-65
Identity = 115/172 (66.86%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MASSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60
           MAS+  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS
Sbjct: 1   MAST--REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60

Query: 61  KAKTNFPPPLPSAAAVLDLNVSSSAAGPATWP----------STRLLLGDFLR----NDL 120
           KAKTNFPPPLP  +  LDLNVS     P + P          S R LLGDFLR    ND+
Sbjct: 61  KAKTNFPPPLPGLS--LDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDM 120

Query: 121 CCPVNVGPSPPAAPPMVLEASA-----ATTSFLGHVRRGLLIDLNEPPPVWL 153
           C  +NV     AA P++++ SA     A+ SF+GHVRRGL  DLNEPPPVWL
Sbjct: 121 CN-LNVD----AASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of MC03g_new0336 vs. ExPASy TrEMBL
Match: A0A1S3B631 (ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486573 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 4.77e-65
Identity = 115/172 (66.86%), Postives = 126/172 (73.26%), Query Frame = 0


Query: 1   MASSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60
           MAS+  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS
Sbjct: 1   MAST--REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60

Query: 61  KAKTNFPPPLPSAAAVLDLNVSSSAAGPATWP----------STRLLLGDFLR----NDL 120
           KAKTNFPPPLP  +  LDLNVS     P + P          S R LLGDFLR    ND+
Sbjct: 61  KAKTNFPPPLPGLS--LDLNVSGPWPTPTSAPPCSSSSSSSSSARFLLGDFLRHGVRNDM 120

Query: 121 CCPVNVGPSPPAAPPMVLEASA-----ATTSFLGHVRRGLLIDLNEPPPVWL 153
           C  +NV     AA P++++ SA     A+ SF+GHVRRGL  DLNEPPPVWL
Sbjct: 121 CN-LNVD----AASPVLVDTSASASSTASASFIGHVRRGLPFDLNEPPPVWL 163

[Close]

BLAST of MC03g_new0336 vs. ExPASy TrEMBL
Match: A0A6J1K1B3 (ethylene-responsive transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=LOC111490195 PE=4 SV=1)

HSP 1 Score: 200 bits (509), Expect = 2.81e-63
Identity = 107/161 (66.46%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 1   MASSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60
           MAS+  R+GHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS
Sbjct: 1   MAST--RDGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGS 60

Query: 61  KAKTNFPPPLPSAAAVLDLNVSSSAAGPATWPST----RLLLGDFLRNDL----CCPVNV 120
           KAKTNFP PL +A    DLNVS   A P++  S+    RLLLGDFLR+       C V+V
Sbjct: 61  KAKTNFPLPLSAAGLCFDLNVSRPTASPSSTSSSSSSARLLLGDFLRHGAPRHKMCNVDV 120

Query: 121 GPSPPAAPPMVLEASAATTSFLGHVRRGLLIDLNEPPPVWL 153
             SP           ++T SF+GHVRR L  DLNEPPPVWL
Sbjct: 121 EVSPVLVDSSAPTPPSSTASFIGHVRRVLPFDLNEPPPVWL 159

[Close]

BLAST of MC03g_new0336 vs. TAIR 10
Match: AT1G28360.1 (ERF domain protein 12 )

HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36
Identity = 99/194 (51.03%), Postives = 109/194 (56.19%), Query Frame = 0


Query: 1   MASSS-GREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRG 60
           MAS++  RE HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAAR LRG
Sbjct: 1   MASTTCAREVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRG 60

Query: 61  SKAKTNFPPPL----------PSAAAVLDLNVSSS------AAGPATWPST-------RL 120
            KAKTNFP PL          PSAA     N          AA P   PS+       R+
Sbjct: 61  IKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQHHRI 120

Query: 121 LLGDFLRNDLC-------CPVNVGPSPPAAP----------PMVLEASAATTSFLGHVRR 154
            L   + ND          P+    SP  A           PM+  + +  T     VRR
Sbjct: 121 FLRTGVLNDKTSDYSSTEAPLYFTSSPNTATSSPGYQVVGFPMMNSSPSPVT-----VRR 180

[Close]

BLAST of MC03g_new0336 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 111.7 bits (278), Expect = 5.3e-25
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 7  REGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNF 66
          +E H+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RGSKAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 67 PPP 70
          P P
Sbjct: 89 PLP 91

[Close]

BLAST of MC03g_new0336 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24
Identity = 53/75 (70.67%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 3  SSSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKA 62
          + S +E  +RGVRKRPWGR+AAEIRDPWKK RVWLGTFD+ EEAA AYD AAR+LRG KA
Sbjct: 20 NGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKA 79

Query: 63 KTNFP-----PPLPS 73
          KTNFP     PP P+
Sbjct: 80 KTNFPIDSSSPPPPN 94

[Close]

BLAST of MC03g_new0336 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-23
Identity = 65/116 (56.03%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 4   SSGREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAK 63
           ++ +E  YRGVRKRPWGRYAAEIRDP KKTRVWLGTFDT EEAA AYD AAR  RG+KAK
Sbjct: 18  NNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAK 77

Query: 64  TNFPPPL--------------PSAAAVLD------LNVSSSAAGPATWPSTRLLLG 100
           TNFP  L              PS ++ LD      L V S+ AG    P   L LG
Sbjct: 78  TNFPTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAGNVP-PQLELSLG 132

[Close]

BLAST of MC03g_new0336 vs. TAIR 10
Match: AT1G24590.1 (DORNROSCHEN-like )

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-23
Identity = 62/120 (51.67%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 2   ASSSGREG----HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSL 61
           AS +G  G     YRGVR+RPWGRYAAEIRDP  K R WLGTFDT EEAA AYD AAR++
Sbjct: 45  ASGAGASGVSTIRYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAM 104

Query: 62  RGSKAKTNFPPPLPSAAAVLDLNVSSSAAGPATWPSTRLLLGDFLRNDLCCPVNVGPSPP 118
           RG KA+TNF  P+PS    LD       + P   P    LL D L +    P+     PP
Sbjct: 105 RGLKARTNFVYPMPS----LDSYHHRIFSSP---PMNMFLLRDVLNSQSLSPLTTFAYPP 157

The following BLAST results are available for this feature:

BLAST of MC03g_new0336 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94ID6	1.9e-35	51.03	Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9FE67	7.4e-24	84.13	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40477	9.7e-24	69.62	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9SXS8	1.3e-23	76.12	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
Q9LW49	3.7e-23	68.35	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]

BLAST of MC03g_new0336 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895107.1	8.50e-67	69.75	ethylene-responsive transcription factor 12 [Benincasa hispida]	[more]
XP_004146616.1	4.35e-66	67.46	ethylene-responsive transcription factor 12 [Cucumis sativus]	[more]
XP_022954651.1	7.59e-65	68.18	ethylene-responsive transcription factor 12-like [Cucurbita moschata]	[more]
XP_008442801.1	9.85e-65	66.86	PREDICTED: ethylene-responsive transcription factor 12 [Cucumis melo] >KAA005700...	[more]
KAG6573284.1	5.61e-63	66.88	Ethylene-responsive transcription factor 12, partial [Cucurbita argyrosperma sub...	[more]

BLAST of MC03g_new0336 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSE4	2.10e-66	67.46	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G075030 PE=...	[more]
A0A6J1GRG6	3.67e-65	68.18	ethylene-responsive transcription factor 12-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A5D3DSV2	4.77e-65	66.86	Ethylene-responsive transcription factor 12 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B631	4.77e-65	66.86	ethylene-responsive transcription factor 12 OS=Cucumis melo OX=3656 GN=LOC103486...	[more]
A0A6J1K1B3	2.81e-63	66.46	ethylene-responsive transcription factor 12-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of MC03g_new0336 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28360.1	1.3e-36	51.03	ERF domain protein 12	[more]
AT5G44210.1	5.3e-25	84.13	erf domain protein 9	[more]
AT1G50640.1	3.4e-24	70.67	ethylene responsive element binding factor 3	[more]
AT3G15210.1	1.3e-23	56.03	ethylene responsive element binding factor 4	[more]
AT1G24590.1	3.8e-23	51.67	DORNROSCHEN-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 11..22 score: 66.67 coord: 33..49 score: 70.59
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 10..73 e-value: 1.1E-37 score: 141.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 10..59 e-value: 1.4E-14 score: 54.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 10..67 score: 22.760784
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 10..67 e-value: 4.75689E-31 score: 104.276
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 10..68 e-value: 2.1E-27 score: 97.0
None	No IPR available	PANTHER	PTHR31677:SF116	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE	coord: 4..128
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 4..128
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 10..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0336.1	MC03g_new0336.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity