MC03g_new0275 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g_new0275
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC03: 12371633 .. 12372055 (+)
RNA-Seq ExpressionMC03g_new0275
SyntenyMC03g_new0275
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGCGAACGGTCGTCGGGTGTTGGAGATCTTCCCGTTGGATGCTGATAATGCTGTTGCGGCTGACAAAATCAAAGCCAACATTGTTATGTATGGTCCATGGCTTAATCATCAGGGCATTATGAAGAGTTAGAGCTCTCGAGAGGACTACCTTCTGCGATCTCTTGGGATGACTCTTCATCTTTATTGCATTTTGGTTCAGAGAACTTCCATGGTTCAGGGGCAAAGCATGGTAGAGAAGGTGGGCGACGACGAAGGCACGGCAGTGATCGACTCGAACACCATTTTAGAATCTGTAGAGGCTATCAATGTTAATTGTATTAAGATCCGTGACCAACATGATTTGGAGAATTTGACTAATCTTTCCTTACCTGTGGAGAATAAGGCAACTTTAGAGCAATTATTTTCCTTCAAATCCTAA

mRNA sequence

ATGGTGGCGAACGGTCGTCGGGTGTTGGAGATCTTCCCGTTGGATGCTGATAATGCTGTTGCGGCTGACAAAATCAAAGCCAACATTAGAACTTCCATGGTTCAGGGGCAAAGCATGGTAGAGAAGGTGGGCGACGACGAAGGCACGGCAGTGATCGACTCGAACACCATTTTAGAATCTGTAGAGGCTATCAATGTTAATTGTATTAAGATCCGTGACCAACATGATTTGGAGAATTTGACTAATCTTTCCTTACCTGTGGAGAATAAGGCAACTTTAGAGCAATTATTTTCCTTCAAATCCTAA

Coding sequence (CDS)

ATGGTGGCGAACGGTCGTCGGGTGTTGGAGATCTTCCCGTTGGATGCTGATAATGCTGTTGCGGCTGACAAAATCAAAGCCAACATTAGAACTTCCATGGTTCAGGGGCAAAGCATGGTAGAGAAGGTGGGCGACGACGAAGGCACGGCAGTGATCGACTCGAACACCATTTTAGAATCTGTAGAGGCTATCAATGTTAATTGTATTAAGATCCGTGACCAACATGATTTGGAGAATTTGACTAATCTTTCCTTACCTGTGGAGAATAAGGCAACTTTAGAGCAATTATTTTCCTTCAAATCCTAA

Protein sequence

MVANGRRVLEIFPLDADNAVAADKIKANIRTSMVQGQSMVEKVGDDEGTAVIDSNTILESVEAINVNCIKIRDQHDLENLTNLSLPVENKATLEQLFSFKS
Homology
[Close]
BLAST of MC03g_new0275 vs. NCBI nr
Match: XP_022159860.1 (uncharacterized protein LOC111026150 [Momordica charantia])

HSP 1 Score: 82.8 bits (203), Expect = 6.94e-18
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 0 

Query: 10  EIFPLDADNAVAADKIKANI-------------RTSMVQG--QSMVEKVGDDEGTAVIDS 69
           EI PLDA++AV  DKIKANI             ++   Q   + M +KVGDD G A I S
Sbjct: 9   EISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDDGGAATIKS 68

Query: 70  NTILESVEAINVNCIKIRDQHDLENLTNLSLPV--ENKATLEQLFS 98
           NT+L SVE IN+NC++I  QHD  NL+N SLPV  E+K T + + S
Sbjct: 69  NTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTIIS 114

[Close]
BLAST of MC03g_new0275 vs. ExPASy TrEMBL
Match: A0A6J1DZZ2 (uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026150 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.36e-18
Identity = 51/106 (48.11%), Postives = 65/106 (61.32%), Query Frame = 0 

Query: 10  EIFPLDADNAVAADKIKANI-------------RTSMVQG--QSMVEKVGDDEGTAVIDS 69
           EI PLDA++AV  DKIKANI             ++   Q   + M +KVGDD G A I S
Sbjct: 9   EISPLDANSAVVVDKIKANIVMYGPWHRHHDVLKSYHAQNWTRMMEQKVGDDGGAATIKS 68

Query: 70  NTILESVEAINVNCIKIRDQHDLENLTNLSLPV--ENKATLEQLFS 98
           NT+L SVE IN+NC++I  QHD  NL+N SLPV  E+K T + + S
Sbjct: 69  NTVLGSVEVINLNCLEIPCQHDFGNLSNPSLPVTVEDKTTFDTIIS 114

The following BLAST results are available for this feature:
BLAST of MC03g_new0275 vs.
Match NameE-valueIdentityDescription
BLAST of MC03g_new0275 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159860.16.94e-1848.11uncharacterized protein LOC111026150 [Momordica charantia][more]
BLAST of MC03g_new0275 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DZZ23.36e-1848.11uncharacterized protein LOC111026150 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
BLAST of MC03g_new0275 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g_new0275.1MC03g_new0275.1mRNA