MC03g_new0193 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g_new0193
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC03: 8661084 .. 8661805 (+)
RNA-Seq Expression	MC03g_new0193
Synteny	MC03g_new0193

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGAACCTTGGTCACCGACAAGCTACTCTTGGAGTCGGGGCTACTTGACTACAACCCTCTGGTTCGACCAATTGAAGCTTCGAGGCCAAACTCCGAGCTCGGTAAGCCGTGTTCGATCTCGTCTTCAATTTAATCTTTCCTTTGATTTCTAACTTTATGCTTGTTTATTTTGCAGCAGTGGTGTGTGGATTCACGAGCAGTGTGAAACGCAAGTCCAAGGGTCGTGCTCACACCTTCAAAACCGTGGTGGGTACTGAACCGGTGACGCCTACAGTGCCACGGACTGAGGCTGAGGGTAACTCTAGGCCATCTTCTGCAGTCCCCACCCCCTTGATCGAACTAGACTTGTCTGGGGGTCGATCTGAAGAGAAGCGTCCGAGGGAAGAGTCTGAGGCGCTTGACGTATCTCCCCTGAACGAGGTGAGAGGAGAGTCGCCTTTGAGGAAGAGAAGAAAGAAGAAGAAGACCTTCTCCTCCTCGGAAGCTGGGGCTCGTGGGACTCTGCCTACGAGCCATGCTGATTTGGTGGATGACCCCGAAGCTCGGATGGGGGGGACATCCGATGTGCGAATGCGGTTCAGGATGGAACCGTCAAGTTCCGGGGTGAAGGACCAGGTATCCCGCAATCTCGGCCACGTGCTTGGACCGCTGCCTGAGGAGAGCATCGAAGTTCATGAGTGATCCTGGGTCCGTACCGCAGAGGGCCATTGACAACGCTGCCG

mRNA sequence

ATGCTTGTTTATTTTGCAGCAGTGGTGTGTGGATTCACGAGCAGTGTGAAACGCAAGTCCAAGGGTCGTGCTCACACCTTCAAAACCGTGGTGGGTACTGAACCGGTGACGCCTACAGTGCCACGGACTGAGGCTGAGGGTAACTCTAGGCCATCTTCTGCAGTCCCCACCCCCTTGATCGAACTAGACTTGTCTGGGGGTCGATCTGAAGAGAAGCGTCCGAGGGAAGAGTCTGAGGCGCTTGACGTATCTCCCCTGAACGAGGTGAGAGGAGAGTCGCCTTTGAGGAAGAGAAGAAAGAAGAAGAAGACCTTCTCCTCCTCGGAAGCTGGGGCTCGTGGGACTCTGCCTACGAGCCATGCTGATTTGGTGGATGACCCCGAAGCTCGGATGGGGGGGACATCCGATGTGCGAATGCGGTTCAGGATGGAACCGTCAAGTTCCGGGGTGAAGGACCAGGTATCCCGCAATCTCGGCCACGTGCTTGGACCGCTGCCTGAGGAGAGCATCGAAGTTCATGAGTGA

Coding sequence (CDS)

ATGCTTGTTTATTTTGCAGCAGTGGTGTGTGGATTCACGAGCAGTGTGAAACGCAAGTCCAAGGGTCGTGCTCACACCTTCAAAACCGTGGTGGGTACTGAACCGGTGACGCCTACAGTGCCACGGACTGAGGCTGAGGGTAACTCTAGGCCATCTTCTGCAGTCCCCACCCCCTTGATCGAACTAGACTTGTCTGGGGGTCGATCTGAAGAGAAGCGTCCGAGGGAAGAGTCTGAGGCGCTTGACGTATCTCCCCTGAACGAGGTGAGAGGAGAGTCGCCTTTGAGGAAGAGAAGAAAGAAGAAGAAGACCTTCTCCTCCTCGGAAGCTGGGGCTCGTGGGACTCTGCCTACGAGCCATGCTGATTTGGTGGATGACCCCGAAGCTCGGATGGGGGGGACATCCGATGTGCGAATGCGGTTCAGGATGGAACCGTCAAGTTCCGGGGTGAAGGACCAGGTATCCCGCAATCTCGGCCACGTGCTTGGACCGCTGCCTGAGGAGAGCATCGAAGTTCATGAGTGA

Protein sequence

MLVYFAAVVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSGGRSEEKRPREESEALDVSPLNEVRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVDDPEARMGGTSDVRMRFRMEPSSSGVKDQVSRNLGHVLGPLPEESIEVHE

Homology

[Close]

BLAST of MC03g_new0193 vs. NCBI nr
Match: XP_022159252.1 (uncharacterized protein LOC111025665 [Momordica charantia])

HSP 1 Score: 258 bits (658), Expect = 2.26e-80
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 7   AVVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSG 66
           A+VCGFT SVKRKSKGRAH  KTVVGTEPVTPTVPRT A+GNS PSSAVPTP+IELDLSG
Sbjct: 115 AMVCGFTGSVKRKSKGRAHALKTVVGTEPVTPTVPRTXAQGNSGPSSAVPTPVIELDLSG 174

Query: 67  GRSEEKRPREESEALDVSPLNEVRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVDD 126
           GRS EKR REESEALDVSPLNEVRGESPLR+RRKKKKT SSSEAGARGTLPTSHADLVDD
Sbjct: 175 GRSGEKRSREESEALDVSPLNEVRGESPLRRRRKKKKTSSSSEAGARGTLPTSHADLVDD 234

Query: 127 PEARMGGTSDVRMRFRMEPSSSGVKDQVSR 156
           PEARM GTS+VRMRF MEPSSSGVKDQVSR
Sbjct: 235 PEARMRGTSNVRMRFGMEPSSSGVKDQVSR 264

[Close]

BLAST of MC03g_new0193 vs. NCBI nr
Match: XP_022159164.1 (uncharacterized protein LOC111025590 [Momordica charantia])

HSP 1 Score: 165 bits (417), Expect = 2.93e-48
Identity = 91/150 (60.67%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 8   VVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSGG 67
           +VCGF SSVKRKSKGRAH  +    ++P TP V        + P+S  P P+IEL+ SGG
Sbjct: 1   MVCGFASSVKRKSKGRAHALEAAQSSKPTTPAV--------AGPASEDPAPVIELESSGG 60

Query: 68  RSEEKRPREESEALDVSPLNE-VRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVDD 127
            S EKRPR+++EA+D  PL E VR E+PL++RRKKKKT S  E GA   LP S AD VDD
Sbjct: 61  PSREKRPRDQTEAVDALPLGEEVREEAPLKRRRKKKKTISPLEVGACRVLPASFADRVDD 120

Query: 128 PEARMGGTSDVRMRFRMEPSSSGVKDQVSR 156
           P ARMGGTSDV  RFR+EPSSSGV+DQVSR
Sbjct: 121 PAARMGGTSDVSARFRVEPSSSGVRDQVSR 142

[Close]

BLAST of MC03g_new0193 vs. NCBI nr
Match: XP_022159185.1 (uncharacterized protein LOC111025606 [Momordica charantia])

HSP 1 Score: 166 bits (421), Expect = 3.54e-48
Identity = 91/150 (60.67%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 8   VVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSGG 67
           +VCGF SSVKRKSKGRAH  +    ++P TP V        + P+S  P P+IEL+ SGG
Sbjct: 1   MVCGFASSVKRKSKGRAHAXEAAQSSKPATPAV--------AGPASEDPAPVIELESSGG 60

Query: 68  RSEEKRPREESEALDVSPLNE-VRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVDD 127
            S EKRPR+++EA+D  PL E VR E PL++RRKKKKT S  E GA G LP S AD VDD
Sbjct: 61  PSREKRPRDQTEAVDALPLGEEVREEVPLKRRRKKKKTISPLEVGACGVLPASFADRVDD 120

Query: 128 PEARMGGTSDVRMRFRMEPSSSGVKDQVSR 156
           PEARMGGTSDV  RFR++PSS+GV+DQVSR
Sbjct: 121 PEARMGGTSDVTARFRVQPSSAGVRDQVSR 142

[Close]

BLAST of MC03g_new0193 vs. NCBI nr
Match: XP_022138041.1 (uncharacterized protein LOC111009298 [Momordica charantia])

HSP 1 Score: 164 bits (416), Expect = 2.60e-47
Identity = 91/148 (61.49%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 7   AVVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSG 66
           A+VCGF S+VKRKSKG+AH  +    ++PVTP V          P+S  P P+IEL+ S 
Sbjct: 101 AMVCGFASNVKRKSKGQAHALEAAQSSKPVTPAV--------VGPASEDPAPVIELESSR 160

Query: 67  GRSEEKRPREESEALDVSPLNE-VRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVD 126
           G S EKRPR+++EA+DVSPL E VR E PL++RRKKKKT S  E GARG LP S AD VD
Sbjct: 161 GPSREKRPRDQTEAVDVSPLGEEVREEVPLKRRRKKKKTTSPLEVGARGVLPASFADRVD 220

Query: 127 DPEARMGGTSDVRMRFRMEPSSSGVKDQ 153
           DPEARMGGT DV  RFR+EPSSSGV+DQ
Sbjct: 221 DPEARMGGTPDVTTRFRVEPSSSGVRDQ 240

[Close]

BLAST of MC03g_new0193 vs. NCBI nr
Match: XP_022139697.1 (uncharacterized protein LOC111010544 [Momordica charantia])

HSP 1 Score: 152 bits (384), Expect = 2.08e-42
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 7   AVVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSG 66
           A+VCGFT SVKRKSKGRAH  KTVVGTEPV PTVPRTEA GNS PSS  PTP+IELDLSG
Sbjct: 94  AMVCGFTGSVKRKSKGRAHALKTVVGTEPVMPTVPRTEAHGNSGPSSTAPTPVIELDLSG 153

Query: 67  GRSEEKRPREESEALDVSPLNEVRGESPLRKRR 99
            RS EKRPREESEALDVSPLNEVRGE PLR+RR
Sbjct: 154 DRSGEKRPREESEALDVSPLNEVRGEFPLRRRR 186

[Close]

BLAST of MC03g_new0193 vs. ExPASy TrEMBL
Match: A0A6J1DZB3 (uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025665 PE=4 SV=1)

HSP 1 Score: 258 bits (658), Expect = 1.09e-80
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 0


Query: 7   AVVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSG 66
           A+VCGFT SVKRKSKGRAH  KTVVGTEPVTPTVPRT A+GNS PSSAVPTP+IELDLSG
Sbjct: 115 AMVCGFTGSVKRKSKGRAHALKTVVGTEPVTPTVPRTXAQGNSGPSSAVPTPVIELDLSG 174

Query: 67  GRSEEKRPREESEALDVSPLNEVRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVDD 126
           GRS EKR REESEALDVSPLNEVRGESPLR+RRKKKKT SSSEAGARGTLPTSHADLVDD
Sbjct: 175 GRSGEKRSREESEALDVSPLNEVRGESPLRRRRKKKKTSSSSEAGARGTLPTSHADLVDD 234

Query: 127 PEARMGGTSDVRMRFRMEPSSSGVKDQVSR 156
           PEARM GTS+VRMRF MEPSSSGVKDQVSR
Sbjct: 235 PEARMRGTSNVRMRFGMEPSSSGVKDQVSR 264

[Close]

BLAST of MC03g_new0193 vs. ExPASy TrEMBL
Match: A0A6J1E1K8 (uncharacterized protein LOC111025590 OS=Momordica charantia OX=3673 GN=LOC111025590 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 1.42e-48
Identity = 91/150 (60.67%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 8   VVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSGG 67
           +VCGF SSVKRKSKGRAH  +    ++P TP V        + P+S  P P+IEL+ SGG
Sbjct: 1   MVCGFASSVKRKSKGRAHALEAAQSSKPTTPAV--------AGPASEDPAPVIELESSGG 60

Query: 68  RSEEKRPREESEALDVSPLNE-VRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVDD 127
            S EKRPR+++EA+D  PL E VR E+PL++RRKKKKT S  E GA   LP S AD VDD
Sbjct: 61  PSREKRPRDQTEAVDALPLGEEVREEAPLKRRRKKKKTISPLEVGACRVLPASFADRVDD 120

Query: 128 PEARMGGTSDVRMRFRMEPSSSGVKDQVSR 156
           P ARMGGTSDV  RFR+EPSSSGV+DQVSR
Sbjct: 121 PAARMGGTSDVSARFRVEPSSSGVRDQVSR 142

[Close]

BLAST of MC03g_new0193 vs. ExPASy TrEMBL
Match: A0A6J1DXZ1 (uncharacterized protein LOC111025606 OS=Momordica charantia OX=3673 GN=LOC111025606 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 1.71e-48
Identity = 91/150 (60.67%), Postives = 109/150 (72.67%), Query Frame = 0


Query: 8   VVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSGG 67
           +VCGF SSVKRKSKGRAH  +    ++P TP V        + P+S  P P+IEL+ SGG
Sbjct: 1   MVCGFASSVKRKSKGRAHAXEAAQSSKPATPAV--------AGPASEDPAPVIELESSGG 60

Query: 68  RSEEKRPREESEALDVSPLNE-VRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVDD 127
            S EKRPR+++EA+D  PL E VR E PL++RRKKKKT S  E GA G LP S AD VDD
Sbjct: 61  PSREKRPRDQTEAVDALPLGEEVREEVPLKRRRKKKKTISPLEVGACGVLPASFADRVDD 120

Query: 128 PEARMGGTSDVRMRFRMEPSSSGVKDQVSR 156
           PEARMGGTSDV  RFR++PSS+GV+DQVSR
Sbjct: 121 PEARMGGTSDVTARFRVQPSSAGVRDQVSR 142

[Close]

BLAST of MC03g_new0193 vs. ExPASy TrEMBL
Match: A0A6J1C8K9 (uncharacterized protein LOC111009298 OS=Momordica charantia OX=3673 GN=LOC111009298 PE=4 SV=1)

HSP 1 Score: 164 bits (416), Expect = 1.26e-47
Identity = 91/148 (61.49%), Postives = 108/148 (72.97%), Query Frame = 0


Query: 7   AVVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSG 66
           A+VCGF S+VKRKSKG+AH  +    ++PVTP V          P+S  P P+IEL+ S 
Sbjct: 101 AMVCGFASNVKRKSKGQAHALEAAQSSKPVTPAV--------VGPASEDPAPVIELESSR 160

Query: 67  GRSEEKRPREESEALDVSPLNE-VRGESPLRKRRKKKKTFSSSEAGARGTLPTSHADLVD 126
           G S EKRPR+++EA+DVSPL E VR E PL++RRKKKKT S  E GARG LP S AD VD
Sbjct: 161 GPSREKRPRDQTEAVDVSPLGEEVREEVPLKRRRKKKKTTSPLEVGARGVLPASFADRVD 220

Query: 127 DPEARMGGTSDVRMRFRMEPSSSGVKDQ 153
           DPEARMGGT DV  RFR+EPSSSGV+DQ
Sbjct: 221 DPEARMGGTPDVTTRFRVEPSSSGVRDQ 240

[Close]

BLAST of MC03g_new0193 vs. ExPASy TrEMBL
Match: A0A6J1CEP5 (uncharacterized protein LOC111010544 OS=Momordica charantia OX=3673 GN=LOC111010544 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 1.01e-42
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 7   AVVCGFTSSVKRKSKGRAHTFKTVVGTEPVTPTVPRTEAEGNSRPSSAVPTPLIELDLSG 66
           A+VCGFT SVKRKSKGRAH  KTVVGTEPV PTVPRTEA GNS PSS  PTP+IELDLSG
Sbjct: 94  AMVCGFTGSVKRKSKGRAHALKTVVGTEPVMPTVPRTEAHGNSGPSSTAPTPVIELDLSG 153

Query: 67  GRSEEKRPREESEALDVSPLNEVRGESPLRKRR 99
            RS EKRPREESEALDVSPLNEVRGE PLR+RR
Sbjct: 154 DRSGEKRPREESEALDVSPLNEVRGEFPLRRRR 186

The following BLAST results are available for this feature:

BLAST of MC03g_new0193 vs.


Match Name	E-value	Identity	Description

BLAST of MC03g_new0193 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159252.1	2.26e-80	90.00	uncharacterized protein LOC111025665 [Momordica charantia]	[more]
XP_022159164.1	2.93e-48	60.67	uncharacterized protein LOC111025590 [Momordica charantia]	[more]
XP_022159185.1	3.54e-48	60.67	uncharacterized protein LOC111025606 [Momordica charantia]	[more]
XP_022138041.1	2.60e-47	61.49	uncharacterized protein LOC111009298 [Momordica charantia]	[more]
XP_022139697.1	2.08e-42	84.95	uncharacterized protein LOC111010544 [Momordica charantia]	[more]

BLAST of MC03g_new0193 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZB3	1.09e-80	90.00	uncharacterized protein LOC111025665 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1E1K8	1.42e-48	60.67	uncharacterized protein LOC111025590 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DXZ1	1.71e-48	60.67	uncharacterized protein LOC111025606 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1C8K9	1.26e-47	61.49	uncharacterized protein LOC111009298 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6J1CEP5	1.01e-42	84.95	uncharacterized protein LOC111010544 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of MC03g_new0193 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g_new0193.1	MC03g_new0193.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0046872	metal ion binding