MC03g1318 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC03g1318
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transcription factor, TCP
Location	MC03: 18879542 .. 18879958 (+)
RNA-Seq Expression	MC03g1318
Synteny	MC03g1318

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTATCAACAGAACCACCACCGTTCAACCACTTTTCCTCTCCAGCTGTTAGAGAAGAAGGAATACGATTCTCATTCTCAGCTGGAGCCGGAACTTCTGGCTGAGACTTCGAAGAAGCCCTCTTCAAAGAGGACCACCACCAAAGACCGCCACACTAAAGTCGACGGTCGTGGCCGCCGCACCCGAATGCCTGCTCTTTGTGCTGCCAGAGTTTTCCAGCTCACCCGCGAGCTCGGCCACAAATCCGACGGGGAGACCATCGAGTGGCTCCTTCAGCAGGCCGAGCCCGCCGTGATCGCCGCCACGGGTACCGGCACCATACCTGCAAACTTCAACTCTCTCAATACGTCGCTAAGAAGGTCCGCCACAAGCATCTCTTTGCCATCCCAACTAAGATCCTCGTCTTACTATCATCCG

mRNA sequence

CACTATCAACAGAACCACCACCGTTCAACCACTTTTCCTCTCCAGCTGTTAGAGAAGAAGGAATACGATTCTCATTCTCAGCTGGAGCCGGAACTTCTGGCTGAGACTTCGAAGAAGCCCTCTTCAAAGAGGACCACCACCAAAGACCGCCACACTAAAGTCGACGGTCGTGGCCGCCGCACCCGAATGCCTGCTCTTTGTGCTGCCAGAGTTTTCCAGCTCACCCGCGAGCTCGGCCACAAATCCGACGGGGAGACCATCGAGTGGCTCCTTCAGCAGGCCGAGCCCGCCGTGATCGCCGCCACGGGTACCGGCACCATACCTGCAAACTTCAACTCTCTCAATACGTCGCTAAGAAGGTCCGCCACAAGCATCTCTTTGCCATCCCAACTAAGATCCTCGTCTTACTATCATCCG

Coding sequence (CDS)

CACTATCAACAGAACCACCACCGTTCAACCACTTTTCCTCTCCAGCTGTTAGAGAAGAAGGAATACGATTCTCATTCTCAGCTGGAGCCGGAACTTCTGGCTGAGACTTCGAAGAAGCCCTCTTCAAAGAGGACCACCACCAAAGACCGCCACACTAAAGTCGACGGTCGTGGCCGCCGCACCCGAATGCCTGCTCTTTGTGCTGCCAGAGTTTTCCAGCTCACCCGCGAGCTCGGCCACAAATCCGACGGGGAGACCATCGAGTGGCTCCTTCAGCAGGCCGAGCCCGCCGTGATCGCCGCCACGGGTACCGGCACCATACCTGCAAACTTCAACTCTCTCAATACGTCGCTAAGAAGGTCCGCCACAAGCATCTCTTTGCCATCCCAACTAAGATCCTCGTCTTACTATCATCCG

Protein sequence

HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHP

Homology

[Close]

BLAST of MC03g1318 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.7e-39
Identity = 96/178 (53.93%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEP------------------------------ 60
           H   +HH   TFP QLL K + D + Q +P                              
Sbjct: 28  HRHLHHHHRPTFPFQLLGKHDPDDNHQQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQ 87

Query: 61  -------------ELLAETSKKPSSKRTTTKDRHTKVDGRGRRTRMPALCAARVFQLTRE 120
                        E     +KKP  KR +TKDRHTKVDGRGRR RMPALCAARVFQLTRE
Sbjct: 88  PQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRE 147

Query: 121 LGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS 136
           LGHKSDGETIEWLLQQAEP+VIAATGTGTIPANF SLN SLR S +S+SLPS  RS++
Sbjct: 148 LGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHFRSAA 205

[Close]

BLAST of MC03g1318 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-38
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 5   NHHRSTTFPLQLLEKKEYDSHSQLEPELLAETS------KKPSSKRTTTKDRHTKVDGRG 64
           +H+    FPLQLL+     S + L   +++ TS      KKP  KRT+TKDRHTKV+GRG
Sbjct: 6   DHNHRPNFPLQLLDSSTSSSSTSL--AIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGRG 65

Query: 65  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 124
           RR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANF SLN SL
Sbjct: 66  RRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISL 125

Query: 125 RRSATSISLPSQLRS--SSYY 138
           R S +S+S  + LR+  SSYY
Sbjct: 126 RSSRSSLS-AAHLRTTPSSYY 143

[Close]

BLAST of MC03g1318 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 75/102 (73.53%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 29  EPELLAETSKKPSSKRT--TTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGET 88
           E   LA TS   ++  T  +TKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGET
Sbjct: 40  EDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGET 99

Query: 89  IEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP 129
           IEWLLQQAEPA++AATGTGTIPANF++L+ SLR S +++S P
Sbjct: 100 IEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAP 141

[Close]

BLAST of MC03g1318 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.9e-32
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 47  TKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGT 106
           TKDRHTKV+GRGRR RMPALCAARVFQLTRELGHK+DGETIEWLLQQAEPA++AATGTGT
Sbjct: 152 TKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGT 211

Query: 107 IPANFNSLNTSLRRSATSISLPSQLRSSSYYH 139
           IPANF+SL  SLR +A+  S P   R++ ++H
Sbjct: 212 IPANFSSLAVSLRSAASHSSSP---RAAPFHH 240

[Close]

BLAST of MC03g1318 vs. ExPASy Swiss-Prot
Match: Q9C7G4 (Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.2e-32
Identity = 71/95 (74.74%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 41  SSKRTTTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 100
           S+ +  TKDRHTKVDGRGRR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPA+IA
Sbjct: 57  SAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIA 116

Query: 101 ATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS 136
           +TGTGTIPANF++LN SLR    S       +SSS
Sbjct: 117 STGTGTIPANFSTLNASLRSGGGSTLFSQASKSSS 151

[Close]

BLAST of MC03g1318 vs. NCBI nr
Match: XP_022137077.1 (transcription factor TCP15-like [Momordica charantia])

HSP 1 Score: 266 bits (680), Expect = 2.13e-87
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR
Sbjct: 10  HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 69

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 70  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 129

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 130 SATSISLPSQLRSSSYYHP 148

[Close]

BLAST of MC03g1318 vs. NCBI nr
Match: KAA0036073.1 (transcription factor TCP15-like [Cucumis melo var. makuwa] >TYJ98880.1 transcription factor TCP15-like [Cucumis melo var. makuwa])

HSP 1 Score: 222 bits (565), Expect = 6.87e-72
Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HY QNH  + +FPLQLLEKKEYD    LE       SKKPS KRT+TKDRHTKVDGRGRR
Sbjct: 8   HYHQNHRSNASFPLQLLEKKEYDPQPPLEI-----VSKKPSPKRTSTKDRHTKVDGRGRR 67

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 68  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 127

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 128 SATSISLPSQLRSSSYYHP 141

[Close]

BLAST of MC03g1318 vs. NCBI nr
Match: XP_038895370.1 (transcription factor TCP15-like [Benincasa hispida])

HSP 1 Score: 221 bits (564), Expect = 7.12e-70
Identity = 121/139 (87.05%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HY QNH  +T+FPLQLLEKKEYD+  Q   E++   SKKPS KRT+TKDRHTKVDGRGRR
Sbjct: 8   HYHQNHRSTTSFPLQLLEKKEYDN-PQPPLEII---SKKPSPKRTSTKDRHTKVDGRGRR 67

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 68  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 127

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 128 SATSISLPSQLRSSSYYHP 142

[Close]

BLAST of MC03g1318 vs. NCBI nr
Match: XP_008440976.1 (PREDICTED: transcription factor TCP15-like [Cucumis melo])

HSP 1 Score: 222 bits (565), Expect = 8.18e-70
Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HY QNH  + +FPLQLLEKKEYD    LE       SKKPS KRT+TKDRHTKVDGRGRR
Sbjct: 8   HYHQNHRSNASFPLQLLEKKEYDPQPPLEI-----VSKKPSPKRTSTKDRHTKVDGRGRR 67

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 68  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 127

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 128 SATSISLPSQLRSSSYYHP 141

[Close]

BLAST of MC03g1318 vs. NCBI nr
Match: XP_004137578.1 (transcription factor TCP15 [Cucumis sativus] >KGN63984.1 hypothetical protein Csa_013211 [Cucumis sativus])

HSP 1 Score: 222 bits (565), Expect = 8.69e-70
Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HY QNH  + +FPLQLLEKKEYD    LE       SKKPS KRT+TKDRHTKVDGRGRR
Sbjct: 8   HYHQNHRSNASFPLQLLEKKEYDPQPPLEI-----VSKKPSPKRTSTKDRHTKVDGRGRR 67

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 68  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 127

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 128 SATSISLPSQLRSSSYYHP 141

[Close]

BLAST of MC03g1318 vs. ExPASy TrEMBL
Match: A0A6J1C776 (transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111008639 PE=4 SV=1)

HSP 1 Score: 266 bits (680), Expect = 1.03e-87
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR
Sbjct: 10  HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 69

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 70  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 129

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 130 SATSISLPSQLRSSSYYHP 148

[Close]

BLAST of MC03g1318 vs. ExPASy TrEMBL
Match: A0A5D3BGG0 (Transcription factor TCP15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00760 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 3.33e-72
Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HY QNH  + +FPLQLLEKKEYD    LE       SKKPS KRT+TKDRHTKVDGRGRR
Sbjct: 8   HYHQNHRSNASFPLQLLEKKEYDPQPPLEI-----VSKKPSPKRTSTKDRHTKVDGRGRR 67

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 68  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 127

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 128 SATSISLPSQLRSSSYYHP 141

[Close]

BLAST of MC03g1318 vs. ExPASy TrEMBL
Match: A0A1S3B2E2 (transcription factor TCP15-like OS=Cucumis melo OX=3656 GN=LOC103485203 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 3.96e-70
Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HY QNH  + +FPLQLLEKKEYD    LE       SKKPS KRT+TKDRHTKVDGRGRR
Sbjct: 8   HYHQNHRSNASFPLQLLEKKEYDPQPPLEI-----VSKKPSPKRTSTKDRHTKVDGRGRR 67

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 68  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 127

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 128 SATSISLPSQLRSSSYYHP 141

[Close]

BLAST of MC03g1318 vs. ExPASy TrEMBL
Match: A0A0A0LSM3 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033030 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 4.21e-70
Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEPELLAETSKKPSSKRTTTKDRHTKVDGRGRR 60
           HY QNH  + +FPLQLLEKKEYD    LE       SKKPS KRT+TKDRHTKVDGRGRR
Sbjct: 8   HYHQNHRSNASFPLQLLEKKEYDPQPPLEI-----VSKKPSPKRTSTKDRHTKVDGRGRR 67

Query: 61  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 120
           TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR
Sbjct: 68  TRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRR 127

Query: 121 SATSISLPSQLRSSSYYHP 139
           SATSISLPSQLRSSSYYHP
Sbjct: 128 SATSISLPSQLRSSSYYHP 141

[Close]

BLAST of MC03g1318 vs. ExPASy TrEMBL
Match: A0A5A7T0G2 (Transcription factor TCP14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002480 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 4.77e-57
Identity = 109/160 (68.12%), Postives = 119/160 (74.38%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHS---------------------QLEPELLAETSKK 60
           H+QQ+H    TFP QLLEKK+ D+ S                          + AETSKK
Sbjct: 19  HHQQHHQHRPTFPFQLLEKKDEDAASCSTSPYPSLAISADTATTTPTTTSSVVAAETSKK 78

Query: 61  PSSKRTTTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVI 120
           P  KRT+TKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVI
Sbjct: 79  PPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVI 138

Query: 121 AATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHP 139
           AATGTGTIPANF SLN SLR S +S+S+PSQLRSSSYY+P
Sbjct: 139 AATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSSYYNP 178

[Close]

BLAST of MC03g1318 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 161.0 bits (406), Expect = 6.9e-40
Identity = 96/178 (53.93%), Postives = 107/178 (60.11%), Query Frame = 0


Query: 1   HYQQNHHRSTTFPLQLLEKKEYDSHSQLEP------------------------------ 60
           H   +HH   TFP QLL K + D + Q +P                              
Sbjct: 28  HRHLHHHHRPTFPFQLLGKHDPDDNHQQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQ 87

Query: 61  -------------ELLAETSKKPSSKRTTTKDRHTKVDGRGRRTRMPALCAARVFQLTRE 120
                        E     +KKP  KR +TKDRHTKVDGRGRR RMPALCAARVFQLTRE
Sbjct: 88  PQTTQKELLQTQEESAVVAAKKPPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRE 147

Query: 121 LGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS 136
           LGHKSDGETIEWLLQQAEP+VIAATGTGTIPANF SLN SLR S +S+SLPS  RS++
Sbjct: 148 LGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHFRSAA 205

[Close]

BLAST of MC03g1318 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 160.6 bits (405), Expect = 9.0e-40
Identity = 94/141 (66.67%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 5   NHHRSTTFPLQLLEKKEYDSHSQLEPELLAETS------KKPSSKRTTTKDRHTKVDGRG 64
           +H+    FPLQLL+     S + L   +++ TS      KKP  KRT+TKDRHTKV+GRG
Sbjct: 6   DHNHRPNFPLQLLDSSTSSSSTSL--AIISTTSEPNSEPKKPPPKRTSTKDRHTKVEGRG 65

Query: 65  RRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSL 124
           RR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANF SLN SL
Sbjct: 66  RRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISL 125

Query: 125 RRSATSISLPSQLRS--SSYY 138
           R S +S+S  + LR+  SSYY
Sbjct: 126 RSSRSSLS-AAHLRTTPSSYY 143

[Close]

BLAST of MC03g1318 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 144.1 bits (362), Expect = 8.7e-35
Identity = 75/102 (73.53%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 29  EPELLAETSKKPSSKRT--TTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGET 88
           E   LA TS   ++  T  +TKDRHTKVDGRGRR RMPALCAARVFQLTRELGHKSDGET
Sbjct: 40  EDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGET 99

Query: 89  IEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLP 129
           IEWLLQQAEPA++AATGTGTIPANF++L+ SLR S +++S P
Sbjct: 100 IEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLSAP 141

[Close]

BLAST of MC03g1318 vs. TAIR 10
Match: AT1G72010.1 (TCP family transcription factor )

HSP 1 Score: 138.7 bits (348), Expect = 3.7e-33
Identity = 71/95 (74.74%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 41  SSKRTTTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 100
           S+ +  TKDRHTKVDGRGRR RMPA+CAARVFQLTRELGHKSDGETIEWLLQQAEPA+IA
Sbjct: 57  SAVKKPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIA 116

Query: 101 ATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSS 136
           +TGTGTIPANF++LN SLR    S       +SSS
Sbjct: 117 STGTGTIPANFSTLNASLRSGGGSTLFSQASKSSS 151

[Close]

BLAST of MC03g1318 vs. TAIR 10
Match: AT1G35560.1 (TCP family transcription factor )

HSP 1 Score: 135.2 bits (339), Expect = 4.0e-32
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 36  TSKKPSSKRTTTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAE 95
           T+ K  +KR  +KDRH KVDGRGRR RMPA+CAARVFQLTREL HKSDGETIEWLLQQAE
Sbjct: 45  TAAKTPAKR-PSKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAE 104

Query: 96  PAVIAATGTGTIPANFNSLNTSLRRSATSISLP 129
           PA+IAATGTGTIPAN ++LN SLR S +++S P
Sbjct: 105 PAIIAATGTGTIPANISTLNISLRSSGSTLSAP 136

The following BLAST results are available for this feature:

BLAST of MC03g1318 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z00	9.7e-39	53.93	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9C9L2	1.3e-38	66.67	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]
Q9C518	1.2e-33	73.53	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]
Q53PH2	3.9e-32	76.09	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]
Q9C7G4	5.2e-32	74.74	Transcription factor TCP22 OS=Arabidopsis thaliana OX=3702 GN=TCP22 PE=2 SV=1	[more]

BLAST of MC03g1318 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137077.1	2.13e-87	100.00	transcription factor TCP15-like [Momordica charantia]	[more]
KAA0036073.1	6.87e-72	86.33	transcription factor TCP15-like [Cucumis melo var. makuwa] >TYJ98880.1 transcrip...	[more]
XP_038895370.1	7.12e-70	87.05	transcription factor TCP15-like [Benincasa hispida]	[more]
XP_008440976.1	8.18e-70	86.33	PREDICTED: transcription factor TCP15-like [Cucumis melo]	[more]
XP_004137578.1	8.69e-70	86.33	transcription factor TCP15 [Cucumis sativus] >KGN63984.1 hypothetical protein Cs...	[more]

BLAST of MC03g1318 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C776	1.03e-87	100.00	transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111008639 P...	[more]
A0A5D3BGG0	3.33e-72	86.33	Transcription factor TCP15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3B2E2	3.96e-70	86.33	transcription factor TCP15-like OS=Cucumis melo OX=3656 GN=LOC103485203 PE=4 SV=...	[more]
A0A0A0LSM3	4.21e-70	86.33	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033030 PE=4 SV...	[more]
A0A5A7T0G2	4.77e-57	68.13	Transcription factor TCP14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]

BLAST of MC03g1318 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47620.1	6.9e-40	53.93	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G69690.1	9.0e-40	66.67	TCP family transcription factor	[more]
AT1G58100.1	8.7e-35	73.53	TCP family transcription factor	[more]
AT1G72010.1	3.7e-33	74.74	TCP family transcription factor	[more]
AT1G35560.1	4.0e-32	75.27	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 45..129 e-value: 2.5E-35 score: 122.3
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 47..101 score: 27.427216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..62
None	No IPR available	PANTHER	PTHR31072:SF170	TRANSCRIPTION FACTOR TCP23	coord: 29..135
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 29..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC03g1318.1	MC03g1318.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding