MC03g0894 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0894
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionglycine-rich protein 5-like
LocationMC03: 15548436 .. 15548801 (+)
RNA-Seq ExpressionMC03g0894
SyntenyMC03g0894
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTGGCTTCTAAGGTTCTGTGGCTGGTGCTTCTGGGTGCACTTATCTGTGCCTCAGAGCCCAGAAAGATTGTAAGAAATGGGGGAGACATTAAGAATGAGAATGAGAATGAGAAGACATTGCCCTTCCAATTCTTTCCTGGATTTGGTGGCGGGCTTGGCGGCGGCGGAGGGTTTGGTGGCGGCGGTGGCGGTGGACTAGGCGGTGGTTCAGGCTTTGGCAGTGGAGGTGGAGGGGGTTTTGGGTCTGGAATTGGAGGGCTCGGAAGTGGAGGCGGCGGCGGGTTTGGCGGAGGAGGTGGCGGTGGAATTTTAGGCGGCGGAGCCGGAGGAGGAAGCGGTGGAGGATTTGGCGGTGGACTGCCC

mRNA sequence

GCTTTGGCTTCTAAGGTTCTGTGGCTGGTGCTTCTGGGTGCACTTATCTGTGCCTCAGAGCCCAGAAAGATTGTAAGAAATGGGGGAGACATTAAGAATGAGAATGAGAATGAGAAGACATTGCCCTTCCAATTCTTTCCTGGATTTGGTGGCGGGCTTGGCGGCGGCGGAGGGTTTGGTGGCGGCGGTGGCGGTGGACTAGGCGGTGGTTCAGGCTTTGGCAGTGGAGGTGGAGGGGGTTTTGGGTCTGGAATTGGAGGGCTCGGAAGTGGAGGCGGCGGCGGGTTTGGCGGAGGAGGTGGCGGTGGAATTTTAGGCGGCGGAGCCGGAGGAGGAAGCGGTGGAGGATTTGGCGGTGGACTGCCC

Coding sequence (CDS)

GCTTTGGCTTCTAAGGTTCTGTGGCTGGTGCTTCTGGGTGCACTTATCTGTGCCTCAGAGCCCAGAAAGATTGTAAGAAATGGGGGAGACATTAAGAATGAGAATGAGAATGAGAAGACATTGCCCTTCCAATTCTTTCCTGGATTTGGTGGCGGGCTTGGCGGCGGCGGAGGGTTTGGTGGCGGCGGTGGCGGTGGACTAGGCGGTGGTTCAGGCTTTGGCAGTGGAGGTGGAGGGGGTTTTGGGTCTGGAATTGGAGGGCTCGGAAGTGGAGGCGGCGGCGGGTTTGGCGGAGGAGGTGGCGGTGGAATTTTAGGCGGCGGAGCCGGAGGAGGAAGCGGTGGAGGATTTGGCGGTGGACTGCCC

Protein sequence

ALASKVLWLVLLGALICASEPRKIVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGGLP
Homology
BLAST of MC03g0894 vs. NCBI nr
Match: XP_022140151.1 (glycine-rich protein 5-like [Momordica charantia])

HSP 1 Score: 169 bits (429), Expect = 8.92e-52
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   ALASKVLWLVLLGALICASEPRKIVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFG 60
           ALASKVLWLVLLGALICASEPRKIVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFG
Sbjct: 5   ALASKVLWLVLLGALICASEPRKIVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFG 64

Query: 61  GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGG 120
           GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGG
Sbjct: 65  GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGG 124

Query: 121 LP 122
           LP
Sbjct: 125 LP 126

BLAST of MC03g0894 vs. NCBI nr
Match: XP_008446362.1 (PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0056845.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa] >TYJ99348.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (327), Expect = 2.55e-36
Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 0

Query: 1   ALASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 60
           +LA K LWLV+L ALICASEPR++V  NGG+I    E+EKTLPFQFFPG+GGGLGGGGGF
Sbjct: 3   SLAFKYLWLVVLCALICASEPRRLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGF 62

Query: 61  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGG 120
           GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGG
Sbjct: 63  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGG 121

Query: 121 GLP 122
           GLP
Sbjct: 123 GLP 121

BLAST of MC03g0894 vs. NCBI nr
Match: XP_011648421.1 (glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothetical protein Csa_013856 [Cucumis sativus])

HSP 1 Score: 126 bits (316), Expect = 1.20e-34
Identity = 105/121 (86.78%), Postives = 111/121 (91.74%), Query Frame = 0

Query: 3   ASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFGG 62
           A K LWLV+L ALI ASEPRK+V  NGG+I    E+EKTLPFQFFPG+GGGLGGGGGFGG
Sbjct: 5   AFKYLWLVVLCALIWASEPRKLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGFGG 64

Query: 63  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGGL 122
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG+GGGFGGGL
Sbjct: 65  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 121

BLAST of MC03g0894 vs. NCBI nr
Match: XP_038895952.1 (glycine-rich cell wall structural protein-like [Benincasa hispida])

HSP 1 Score: 119 bits (299), Expect = 4.86e-32
Identity = 105/125 (84.00%), Postives = 112/125 (89.60%), Query Frame = 0

Query: 1   ALASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 60
           +LA K LWLV+L ALI ASEPRK+V  NGG+I    E+EKTL FQFFPGFGGGLGGGGG+
Sbjct: 3   SLAFKFLWLVVLCALIWASEPRKLVITNGGEI----ESEKTLAFQFFPGFGGGLGGGGGY 62

Query: 61  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGG--ILGGGAGGGSGGGF 120
           GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGG  ILGGGAGGG+GGGF
Sbjct: 63  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGGGILGGGAGGGAGGGF 122

Query: 121 GGGLP 122
           GGGLP
Sbjct: 123 GGGLP 123

BLAST of MC03g0894 vs. NCBI nr
Match: XP_022994117.1 (glycine-rich protein 5 [Cucurbita maxima])

HSP 1 Score: 107 bits (267), Expect = 3.49e-27
Identity = 96/123 (78.05%), Postives = 104/123 (84.55%), Query Frame = 0

Query: 2   LASKVLWLVLLGALICASEPRKIVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFGG 61
           LA K LWL++L ALICASEPR++V  GG   +E    KT  FQFFPG+GGGLGGGGGFGG
Sbjct: 5   LALKFLWLLVLFALICASEPRRLVGTGGGFGSE----KTGYFQFFPGYGGGLGGGGGFGG 64

Query: 62  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGG--ILGGGAGGGSGGGFGG 121
           GGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGGGGG G  +LGGGAGGG+GGGFGG
Sbjct: 65  GGGGGLGGGSGFGSGGGAGFGSGIGGLGGGGGGGFGGGGGSGSGVLGGGAGGGAGGGFGG 123

BLAST of MC03g0894 vs. ExPASy TrEMBL
Match: A0A6J1CF04 (glycine-rich protein 5-like OS=Momordica charantia OX=3673 GN=LOC111010881 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 4.32e-52
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0

Query: 1   ALASKVLWLVLLGALICASEPRKIVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFG 60
           ALASKVLWLVLLGALICASEPRKIVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFG
Sbjct: 5   ALASKVLWLVLLGALICASEPRKIVRNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFG 64

Query: 61  GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGG 120
           GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGG
Sbjct: 65  GGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGG 124

Query: 121 LP 122
           LP
Sbjct: 125 LP 126

BLAST of MC03g0894 vs. ExPASy TrEMBL
Match: A0A5D3BMG3 (Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005650 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 1.23e-36
Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 0

Query: 1   ALASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 60
           +LA K LWLV+L ALICASEPR++V  NGG+I    E+EKTLPFQFFPG+GGGLGGGGGF
Sbjct: 3   SLAFKYLWLVVLCALICASEPRRLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGF 62

Query: 61  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGG 120
           GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGG
Sbjct: 63  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGG 121

Query: 121 GLP 122
           GLP
Sbjct: 123 GLP 121

BLAST of MC03g0894 vs. ExPASy TrEMBL
Match: E5GC63 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 1.23e-36
Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 0

Query: 1   ALASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 60
           +LA K LWLV+L ALICASEPR++V  NGG+I    E+EKTLPFQFFPG+GGGLGGGGGF
Sbjct: 3   SLAFKYLWLVVLCALICASEPRRLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGF 62

Query: 61  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGG 120
           GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGG
Sbjct: 63  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGG 121

Query: 121 GLP 122
           GLP
Sbjct: 123 GLP 121

BLAST of MC03g0894 vs. ExPASy TrEMBL
Match: A0A1S3BEW4 (glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC103489125 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 1.23e-36
Identity = 106/123 (86.18%), Postives = 113/123 (91.87%), Query Frame = 0

Query: 1   ALASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGF 60
           +LA K LWLV+L ALICASEPR++V  NGG+I    E+EKTLPFQFFPG+GGGLGGGGGF
Sbjct: 3   SLAFKYLWLVVLCALICASEPRRLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGF 62

Query: 61  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGG 120
           GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG GGGFGG
Sbjct: 63  GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGGGGGFGG 121

Query: 121 GLP 122
           GLP
Sbjct: 123 GLP 121

BLAST of MC03g0894 vs. ExPASy TrEMBL
Match: A0A0A0LS00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1)

HSP 1 Score: 126 bits (316), Expect = 5.80e-35
Identity = 105/121 (86.78%), Postives = 111/121 (91.74%), Query Frame = 0

Query: 3   ASKVLWLVLLGALICASEPRKIV-RNGGDIKNENENEKTLPFQFFPGFGGGLGGGGGFGG 62
           A K LWLV+L ALI ASEPRK+V  NGG+I    E+EKTLPFQFFPG+GGGLGGGGGFGG
Sbjct: 5   AFKYLWLVVLCALIWASEPRKLVITNGGEI----ESEKTLPFQFFPGYGGGLGGGGGFGG 64

Query: 63  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGSGGGFGGGL 122
           GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGG+GGGFGGGL
Sbjct: 65  GGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGGGGGGILGGGAGGGAGGGFGGGL 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022140151.18.92e-52100.00glycine-rich protein 5-like [Momordica charantia][more]
XP_008446362.12.55e-3686.18PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 ... [more]
XP_011648421.11.20e-3486.78glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothet... [more]
XP_038895952.14.86e-3284.00glycine-rich cell wall structural protein-like [Benincasa hispida][more]
XP_022994117.13.49e-2778.05glycine-rich protein 5 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1CF044.32e-52100.00glycine-rich protein 5-like OS=Momordica charantia OX=3673 GN=LOC111010881 PE=4 ... [more]
A0A5D3BMG31.23e-3686.18Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695... [more]
E5GC631.23e-3686.18Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A1S3BEW41.23e-3686.18glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC10348912... [more]
A0A0A0LS005.80e-3586.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0894.1MC03g0894.1mRNA