MC03g0698 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC03g0698
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprefoldin subunit 6-like
LocationMC03: 13863872 .. 13864752 (-)
RNA-Seq ExpressionMC03g0698
SyntenyMC03g0698
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCTGCAAGCGCTCTTCGAGAACTACAGCGCGAGCTGGAGGCGAAAGCCAACGAGCTCAGCAAGCTACAGAAAGGCAAGCCTCCAATTGATTTTCGCTCCCCCCTGTTCCCACCACTTGCACGATTTATCGAAACTTTAATATTTCAATTAGATTACTGTGTCGAATGTTCTATCTGGATTCTGTACAATCAACTTACTTTCACAAAAACCCTAACAGTTGATGGATGTATCAGATATTGCGAAGAACCACCAAGTGAGGAAGAAATACACTATTCAGCTGGGTGAGAATGAGCTCGTCCTTAAGGTTTTGACACACCTTCACAACCTTTTTTTTTCTCTCGTAGATTAAAGTATATGGTTGTTCGTAGTTCAATAGCGAGGAGGTGAAGGACGACAATTTTGGTGACCTGGGTATTTCTGTCCGTGCAGAAGTGTTGCAAAGAGCACTATTGATTTTATCGATTTTTTTCCCGTTTCAGTCTAGATTTTCCCGTGTTATAATTAATTATTGTATTGTAGTAGAATTAAGAGGTCACAGGGGCCGATTGTGTCAAGGGGATGTTTTTCACTTGATATAAAATGTAGCTCAGATTATGAAACTTTTTTTTGTTTAATTTATTTGATTTGGTATACAATGAGAAATTCAAAGCTTTCTTATCAATGTATCTTTTTTTTTTTATCAGACAAATTGATTTCTACTAGCTGTGAACATGTTCTTTCTTGCTTGGCTTGTTTGCTTGCATGCGCAGGAATTGGATCTACTGAATGATGATGCAAATGTGTATAAACTGATTGGTCCAGTACTCGTGAAGCAGGATCTGGCAGAAGCAAATGCGAACGTTCGCAAGCGAATAGACTACATCTCTGCTGAATTG

mRNA sequence

ATGAGTTCTGCAAGCGCTCTTCGAGAACTACAGCGCGAGCTGGAGGCGAAAGCCAACGAGCTCAGCAAGCTACAGAAAGGCAAGCCTCCAATTGATTTTCATATTGCGAAGAACCACCAAGTGAGGAAGAAATACACTATTCAGCTGGGTGAGAATGAGCTCGTCCTTAAGGAATTGGATCTACTGAATGATGATGCAAATGTGTATAAACTGATTGGTCCAGTACTCGTGAAGCAGGATCTGGCAGAAGCAAATGCGAACGTTCGCAAGCGAATAGACTACATCTCTGCTGAATTG

Coding sequence (CDS)

ATGAGTTCTGCAAGCGCTCTTCGAGAACTACAGCGCGAGCTGGAGGCGAAAGCCAACGAGCTCAGCAAGCTACAGAAAGGCAAGCCTCCAATTGATTTTCATATTGCGAAGAACCACCAAGTGAGGAAGAAATACACTATTCAGCTGGGTGAGAATGAGCTCGTCCTTAAGGAATTGGATCTACTGAATGATGATGCAAATGTGTATAAACTGATTGGTCCAGTACTCGTGAAGCAGGATCTGGCAGAAGCAAATGCGAACGTTCGCAAGCGAATAGACTACATCTCTGCTGAATTG

Protein sequence

MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
Homology
BLAST of MC03g0698 vs. ExPASy Swiss-Prot
Match: Q17Q89 (Prefoldin subunit 6 OS=Bos taurus OX=9913 GN=PFDN6 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.7e-11
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 10  LQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVY 69
           +Q++L+ +  +  +LQK        ++K+   R+K   QL EN +V +EL LL+    V+
Sbjct: 5   IQKKLQGEVEKYQQLQK-------DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVF 64

Query: 70  KLIGPVLVKQDLAEANANVRKRIDYISAEL 100
           KL+GPVLVKQ+L EA A V KR+DYI+AE+
Sbjct: 65  KLLGPVLVKQELGEARATVGKRLDYITAEI 87

BLAST of MC03g0698 vs. ExPASy Swiss-Prot
Match: Q5TJE6 (Prefoldin subunit 6 OS=Canis lupus familiaris OX=9615 GN=PFDN6 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.7e-11
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 10  LQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVY 69
           +Q++L+ +  +  +LQK        ++K+   R+K   QL EN +V +EL LL+    V+
Sbjct: 5   IQKKLQGEVEKYQQLQK-------DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVF 64

Query: 70  KLIGPVLVKQDLAEANANVRKRIDYISAEL 100
           KL+GPVLVKQ+L EA A V KR+DYI+AE+
Sbjct: 65  KLLGPVLVKQELGEARATVGKRLDYITAEI 87

BLAST of MC03g0698 vs. ExPASy Swiss-Prot
Match: O15212 (Prefoldin subunit 6 OS=Homo sapiens OX=9606 GN=PFDN6 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.7e-11
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 10  LQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVY 69
           +Q++L+ +  +  +LQK        ++K+   R+K   QL EN +V +EL LL+    V+
Sbjct: 5   IQKKLQGEVEKYQQLQK-------DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVF 64

Query: 70  KLIGPVLVKQDLAEANANVRKRIDYISAEL 100
           KL+GPVLVKQ+L EA A V KR+DYI+AE+
Sbjct: 65  KLLGPVLVKQELGEARATVGKRLDYITAEI 87

BLAST of MC03g0698 vs. ExPASy Swiss-Prot
Match: Q03958 (Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.7e-11
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 0

Query: 10  LQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDLLNDDANVY 69
           +Q++L+ +  +  +LQK        ++K+   R+K   QL EN +V +EL LL+    V+
Sbjct: 5   IQKKLQGEVEKYQQLQK-------DLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVF 64

Query: 70  KLIGPVLVKQDLAEANANVRKRIDYISAEL 100
           KL+GPVLVKQ+L EA A V KR+DYI+AE+
Sbjct: 65  KLLGPVLVKQELGEARATVGKRLDYITAEI 87

BLAST of MC03g0698 vs. ExPASy Swiss-Prot
Match: Q9VW56 (Probable prefoldin subunit 6 OS=Drosophila melanogaster OX=7227 GN=Pfdn6 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-10
Identity = 45/97 (46.39%), Postives = 57/97 (58.76%), Query Frame = 0

Query: 3   SASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDLL 62
           SA+  +++Q E+E+  N    LQK          K  + R     QL EN+ VL EL+LL
Sbjct: 5   SAALYKKMQAEIESYQN----LQKS-------CLKMVKQRAVLESQLNENKCVLDELNLL 64

Query: 63  NDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 100
             D  VYKL GPVLVKQ+L E+  NV KRI+YIS EL
Sbjct: 65  GPDNKVYKLFGPVLVKQELEESRQNVGKRIEYISKEL 90

BLAST of MC03g0698 vs. NCBI nr
Match: KAG7019532.1 (Prefoldin subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172 bits (435), Expect = 8.35e-53
Identity = 90/99 (90.91%), Postives = 94/99 (94.95%), Query Frame = 0

Query: 1   MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELD 60
           MSS SA+RELQRELE+KAN+LSKLQKGK  ID HIAKNHQ+RKKYTIQLGENELVLKELD
Sbjct: 11  MSSTSAVRELQRELESKANDLSKLQKGKSLIDSHIAKNHQIRKKYTIQLGENELVLKELD 70

Query: 61  LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
           LL DDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
Sbjct: 71  LLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 109

BLAST of MC03g0698 vs. NCBI nr
Match: XP_022140149.1 (prefoldin subunit 6-like [Momordica charantia])

HSP 1 Score: 163 bits (412), Expect = 1.56e-49
Identity = 91/99 (91.92%), Postives = 91/99 (91.92%), Query Frame = 0

Query: 1  MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELD 60
          MSSASALRELQRELEAKANELSKLQK        IAKNHQVRKKYTIQLGENELVLKELD
Sbjct: 1  MSSASALRELQRELEAKANELSKLQKD-------IAKNHQVRKKYTIQLGENELVLKELD 60

Query: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
Sbjct: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 92

BLAST of MC03g0698 vs. NCBI nr
Match: KAE8715341.1 (putative prefoldin subunit 6 [Hibiscus syriacus])

HSP 1 Score: 160 bits (405), Expect = 6.90e-49
Identity = 85/98 (86.73%), Postives = 94/98 (95.92%), Query Frame = 0

Query: 2  SSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDL 61
          SS++ALRELQR+LE+KAN+LSKLQKG+P    HIAKNHQVRKKYTIQLGENELVLKEL+L
Sbjct: 3  SSSTALRELQRDLESKANDLSKLQKGRPN-QAHIAKNHQVRKKYTIQLGENELVLKELNL 62

Query: 62 LNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LN+DANVYKLIGPVLVKQDLAEANANVRKRI+YISAEL
Sbjct: 63 LNEDANVYKLIGPVLVKQDLAEANANVRKRIEYISAEL 99

BLAST of MC03g0698 vs. NCBI nr
Match: TQD81228.1 (hypothetical protein C1H46_033257 [Malus baccata])

HSP 1 Score: 161 bits (407), Expect = 1.12e-48
Identity = 84/99 (84.85%), Postives = 94/99 (94.95%), Query Frame = 0

Query: 1  MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELD 60
          M+S+SALRELQRELEAKAN+LSK+QKGK  I  +I+KNHQVRKKYTIQLGENELVLKELD
Sbjct: 1  MASSSALRELQRELEAKANDLSKIQKGKSYIHIYISKNHQVRKKYTIQLGENELVLKELD 60

Query: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LL++DANV+KLIGPVLVKQDLAEA ANVRKRI+YISAEL
Sbjct: 61 LLSEDANVFKLIGPVLVKQDLAEARANVRKRIEYISAEL 99

BLAST of MC03g0698 vs. NCBI nr
Match: OVA12080.1 (Prefoldin beta-like [Macleaya cordata])

HSP 1 Score: 157 bits (397), Expect = 2.91e-47
Identity = 87/99 (87.88%), Postives = 90/99 (90.91%), Query Frame = 0

Query: 1  MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELD 60
          MSSASALRELQRELE KAN+LSKLQK        IAKNHQVRKKYTIQLGENELVLKELD
Sbjct: 1  MSSASALRELQRELETKANDLSKLQKD-------IAKNHQVRKKYTIQLGENELVLKELD 60

Query: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LLNDDANV+KLIGPVLVKQDLAEANANVRKRI+YISAEL
Sbjct: 61 LLNDDANVFKLIGPVLVKQDLAEANANVRKRIEYISAEL 92

BLAST of MC03g0698 vs. ExPASy TrEMBL
Match: A0A6J1CEX4 (prefoldin subunit 6-like OS=Momordica charantia OX=3673 GN=LOC111010879 PE=3 SV=1)

HSP 1 Score: 163 bits (412), Expect = 7.53e-50
Identity = 91/99 (91.92%), Postives = 91/99 (91.92%), Query Frame = 0

Query: 1  MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELD 60
          MSSASALRELQRELEAKANELSKLQK        IAKNHQVRKKYTIQLGENELVLKELD
Sbjct: 1  MSSASALRELQRELEAKANELSKLQKD-------IAKNHQVRKKYTIQLGENELVLKELD 60

Query: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
Sbjct: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 92

BLAST of MC03g0698 vs. ExPASy TrEMBL
Match: A0A6A3BHI0 (Putative prefoldin subunit 6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110174pilonHSYRG00053 PE=3 SV=1)

HSP 1 Score: 160 bits (405), Expect = 3.34e-49
Identity = 85/98 (86.73%), Postives = 94/98 (95.92%), Query Frame = 0

Query: 2  SSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDL 61
          SS++ALRELQR+LE+KAN+LSKLQKG+P    HIAKNHQVRKKYTIQLGENELVLKEL+L
Sbjct: 3  SSSTALRELQRDLESKANDLSKLQKGRPN-QAHIAKNHQVRKKYTIQLGENELVLKELNL 62

Query: 62 LNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LN+DANVYKLIGPVLVKQDLAEANANVRKRI+YISAEL
Sbjct: 63 LNEDANVYKLIGPVLVKQDLAEANANVRKRIEYISAEL 99

BLAST of MC03g0698 vs. ExPASy TrEMBL
Match: A0A540L432 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_033257 PE=3 SV=1)

HSP 1 Score: 161 bits (407), Expect = 5.42e-49
Identity = 84/99 (84.85%), Postives = 94/99 (94.95%), Query Frame = 0

Query: 1  MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELD 60
          M+S+SALRELQRELEAKAN+LSK+QKGK  I  +I+KNHQVRKKYTIQLGENELVLKELD
Sbjct: 1  MASSSALRELQRELEAKANDLSKIQKGKSYIHIYISKNHQVRKKYTIQLGENELVLKELD 60

Query: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LL++DANV+KLIGPVLVKQDLAEA ANVRKRI+YISAEL
Sbjct: 61 LLSEDANVFKLIGPVLVKQDLAEARANVRKRIEYISAEL 99

BLAST of MC03g0698 vs. ExPASy TrEMBL
Match: A0A200QNM8 (Prefoldin beta-like OS=Macleaya cordata OX=56857 GN=BVC80_361g6 PE=3 SV=1)

HSP 1 Score: 157 bits (397), Expect = 1.41e-47
Identity = 87/99 (87.88%), Postives = 90/99 (90.91%), Query Frame = 0

Query: 1  MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELD 60
          MSSASALRELQRELE KAN+LSKLQK        IAKNHQVRKKYTIQLGENELVLKELD
Sbjct: 1  MSSASALRELQRELETKANDLSKLQKD-------IAKNHQVRKKYTIQLGENELVLKELD 60

Query: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LLNDDANV+KLIGPVLVKQDLAEANANVRKRI+YISAEL
Sbjct: 61 LLNDDANVFKLIGPVLVKQDLAEANANVRKRIEYISAEL 92

BLAST of MC03g0698 vs. ExPASy TrEMBL
Match: A0A6J1EGS1 (prefoldin subunit 6-like OS=Cucurbita moschata OX=3662 GN=LOC111433965 PE=3 SV=1)

HSP 1 Score: 155 bits (392), Expect = 8.38e-47
Identity = 85/99 (85.86%), Postives = 89/99 (89.90%), Query Frame = 0

Query: 1  MSSASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELD 60
          MSS SA+RELQRELE+KAN+LSKLQK        IAKNHQ+RKKYTIQLGENELVLKELD
Sbjct: 1  MSSTSAVRELQRELESKANDLSKLQKD-------IAKNHQIRKKYTIQLGENELVLKELD 60

Query: 61 LLNDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 99
          LL DDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL
Sbjct: 61 LLKDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 92

BLAST of MC03g0698 vs. TAIR 10
Match: AT1G29990.1 (prefoldin 6 )

HSP 1 Score: 139.0 bits (349), Expect = 2.0e-33
Identity = 75/97 (77.32%), Postives = 84/97 (86.60%), Query Frame = 0

Query: 3   SASALRELQRELEAKANELSKLQKGKPPIDFHIAKNHQVRKKYTIQLGENELVLKELDLL 62
           S+S +R+LQR+LE KAN+L K+QK        I KNHQ+RKKYTIQLGENELVLKELDLL
Sbjct: 2   SSSTVRDLQRDLENKANDLGKIQK-------DIGKNHQLRKKYTIQLGENELVLKELDLL 61

Query: 63  NDDANVYKLIGPVLVKQDLAEANANVRKRIDYISAEL 100
            +DANVYKLIGPVLVKQDLAEANANVRKRI+YISAEL
Sbjct: 62  EEDANVYKLIGPVLVKQDLAEANANVRKRIEYISAEL 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q17Q894.7e-1143.33Prefoldin subunit 6 OS=Bos taurus OX=9913 GN=PFDN6 PE=2 SV=1[more]
Q5TJE64.7e-1143.33Prefoldin subunit 6 OS=Canis lupus familiaris OX=9615 GN=PFDN6 PE=3 SV=1[more]
O152124.7e-1143.33Prefoldin subunit 6 OS=Homo sapiens OX=9606 GN=PFDN6 PE=1 SV=1[more]
Q039584.7e-1143.33Prefoldin subunit 6 OS=Mus musculus OX=10090 GN=Pfdn6 PE=1 SV=1[more]
Q9VW562.3e-1046.39Probable prefoldin subunit 6 OS=Drosophila melanogaster OX=7227 GN=Pfdn6 PE=2 SV... [more]
Match NameE-valueIdentityDescription
KAG7019532.18.35e-5390.91Prefoldin subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022140149.11.56e-4991.92prefoldin subunit 6-like [Momordica charantia][more]
KAE8715341.16.90e-4986.73putative prefoldin subunit 6 [Hibiscus syriacus][more]
TQD81228.11.12e-4884.85hypothetical protein C1H46_033257 [Malus baccata][more]
OVA12080.12.91e-4787.88Prefoldin beta-like [Macleaya cordata][more]
Match NameE-valueIdentityDescription
A0A6J1CEX47.53e-5091.92prefoldin subunit 6-like OS=Momordica charantia OX=3673 GN=LOC111010879 PE=3 SV=... [more]
A0A6A3BHI03.34e-4986.73Putative prefoldin subunit 6 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110174... [more]
A0A540L4325.42e-4984.85Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_033257 PE=3 SV=1[more]
A0A200QNM81.41e-4787.88Prefoldin beta-like OS=Macleaya cordata OX=56857 GN=BVC80_361g6 PE=3 SV=1[more]
A0A6J1EGS18.38e-4785.86prefoldin subunit 6-like OS=Cucurbita moschata OX=3662 GN=LOC111433965 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G29990.12.0e-3377.32prefoldin 6 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 4..27
NoneNo IPR availablePANTHERPTHR21431PREFOLDIN SUBUNIT 6coord: 4..99
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 35..98
IPR009053PrefoldinGENE3D1.10.287.370coord: 7..99
e-value: 1.5E-23
score: 84.7
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 39..99
e-value: 1.2E-15
score: 57.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC03g0698.1MC03g0698.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051131 chaperone-mediated protein complex assembly
biological_process GO:0043622 cortical microtubule organization
biological_process GO:0006457 protein folding
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016272 prefoldin complex
molecular_function GO:0051087 chaperone binding
molecular_function GO:0051082 unfolded protein binding